{"id":"https://openalex.org/W7221524943","doi":"https://doi.org/10.30616/ajb.2006304","title":"Optimization of DNA extraction from fresh and dried Pinus brutia needles using different homogenization methods: An approach for forensic botanical applications","display_name":"Optimization of DNA extraction from fresh and dried Pinus brutia needles using different homogenization methods: An approach for forensic botanical applications","publication_year":2026,"publication_date":"2026-10-12","ids":{"openalex":"https://openalex.org/W7221524943","doi":"https://doi.org/10.30616/ajb.2006304"},"language":"en","primary_location":{"id":"doi:10.30616/ajb.2006304","doi":"https://doi.org/10.30616/ajb.2006304","is_oa":true,"landing_page_url":"https://doi.org/10.30616/ajb.2006304","pdf_url":"https://dergipark.org.tr/en/download/article-file/6278894","source":{"id":"https://openalex.org/S4210218003","display_name":"Anatolian Journal of Botany","issn_l":"2602-2818","issn":["2602-2818"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":["tr-dizin"],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Anatolian Journal of Botany","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://dergipark.org.tr/en/download/article-file/6278894","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5006916511","display_name":"Tu\u011fba \u00dcnsal Sapan","orcid":"https://orcid.org/0000-0003-4744-2298","observed_orcids":["https://orcid.org/0000-0003-4744-2298"]},"institutions":[{"id":"https://openalex.org/I1281256770","display_name":"\u00dcsk\u00fcdar University","ror":"https://ror.org/02dzjmc73","country_code":"TR","type":"education","lineage":["https://openalex.org/I1281256770"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Tu\u011fba \u00dcnsal Sapan","raw_affiliation_strings":["USKUDAR UNIVERSITY, INSTITUTE OF ADDICTION AND FORENSIC SCIENCES, DEPARTMENT OF FORENSIC SCIENCES (INTERDISCIPLINARY)"],"raw_orcid":"https://orcid.org/0000-0003-4744-2298","affiliations":[{"raw_affiliation_string":"USKUDAR UNIVERSITY, INSTITUTE OF ADDICTION AND FORENSIC SCIENCES, DEPARTMENT OF FORENSIC SCIENCES (INTERDISCIPLINARY)","institution_ids":["https://openalex.org/I1281256770"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5158460718","display_name":"Nur Gizem Tanr\u0131verdi","orcid":"https://orcid.org/0009-0003-9690-0336","observed_orcids":["https://orcid.org/0009-0003-9690-0336"]},"institutions":[{"id":"https://openalex.org/I1281256770","display_name":"\u00dcsk\u00fcdar University","ror":"https://ror.org/02dzjmc73","country_code":"TR","type":"education","lineage":["https://openalex.org/I1281256770"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Nur Gizem Tanr\u0131verdi","raw_affiliation_strings":["\u00dcSK\u00dcDAR \u00dcN\u0130VERS\u0130TES\u0130"],"raw_orcid":"https://orcid.org/0009-0003-9690-0336","affiliations":[{"raw_affiliation_string":"\u00dcSK\u00dcDAR \u00dcN\u0130VERS\u0130TES\u0130","institution_ids":["https://openalex.org/I1281256770"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I1281256770"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.72466128,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"10","issue":"2","first_page":"237","last_page":"242"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.4074999988079071,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.4074999988079071,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.21719999611377716,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12640","display_name":"Environmental DNA in Biodiversity Studies","score":0.2101999968290329,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pinus-brutia","display_name":"Pinus brutia","score":0.8799999952316284},{"id":"https://openalex.org/keywords/dna-extraction-optimization","display_name":"DNA extraction optimization","score":0.847000002861023},{"id":"https://openalex.org/keywords/conifer-needles","display_name":"conifer needles","score":0.8610000014305115},{"id":"https://openalex.org/keywords/homogenization-method","display_name":"homogenization method","score":0.8159999847412109},{"id":"https://openalex.org/keywords/forensic-botany","display_name":"forensic botany","score":0.7770000100135803},{"id":"https://openalex.org/keywords/conifer-secondary-metabolites","display_name":"conifer secondary metabolites","score":0.6169999837875366}],"concepts":[{"id":"https://openalex.org/C2778722038","wikidata":"https://www.wikidata.org/wiki/Q17030643","display_name":"Homogenization (climate)","level":3,"score":0.8299000263214111},{"id":"https://openalex.org/C78063203","wikidata":"https://www.wikidata.org/wiki/Q3062596","display_name":"DNA extraction","level":4,"score":0.7427999973297119},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.507099986076355},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.4690000116825104},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.421099990606308},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3935999870300293},{"id":"https://openalex.org/C17757408","wikidata":"https://www.wikidata.org/wiki/Q4135516","display_name":"genomic DNA","level":3,"score":0.3889999985694885},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.3846000134944916},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.37119999527931213},{"id":"https://openalex.org/C2778576202","wikidata":"https://www.wikidata.org/wiki/Q2540164","display_name":"Sample preparation","level":2,"score":0.36480000615119934},{"id":"https://openalex.org/C31903555","wikidata":"https://www.wikidata.org/wiki/Q1637030","display_name":"Food science","level":1,"score":0.3634999990463257},{"id":"https://openalex.org/C79386861","wikidata":"https://www.wikidata.org/wiki/Q476697","display_name":"DNA profiling","level":3,"score":0.35089999437332153},{"id":"https://openalex.org/C2777571299","wikidata":"https://www.wikidata.org/wiki/Q3680646","display_name":"Grinding","level":2,"score":0.2750999927520752},{"id":"https://openalex.org/C115960442","wikidata":"https://www.wikidata.org/wiki/Q769863","display_name":"Nuclear DNA","level":4,"score":0.27489998936653137},{"id":"https://openalex.org/C2780380118","wikidata":"https://www.wikidata.org/wiki/Q628329","display_name":"Pinus brutia","level":3,"score":0.27399998903274536}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.30616/ajb.2006304","doi":"https://doi.org/10.30616/ajb.2006304","is_oa":true,"landing_page_url":"https://doi.org/10.30616/ajb.2006304","pdf_url":"https://dergipark.org.tr/en/download/article-file/6278894","source":{"id":"https://openalex.org/S4210218003","display_name":"Anatolian Journal of Botany","issn_l":"2602-2818","issn":["2602-2818"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":["tr-dizin"],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Anatolian Journal of Botany","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.30616/ajb.2006304","doi":"https://doi.org/10.30616/ajb.2006304","is_oa":true,"landing_page_url":"https://doi.org/10.30616/ajb.2006304","pdf_url":"https://dergipark.org.tr/en/download/article-file/6278894","source":{"id":"https://openalex.org/S4210218003","display_name":"Anatolian Journal of Botany","issn_l":"2602-2818","issn":["2602-2818"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":["tr-dizin"],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Anatolian Journal of Botany","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W7221524943.pdf","grobid_xml":"https://content.openalex.org/works/W7221524943.grobid-xml"},"referenced_works_count":21,"referenced_works":["https://openalex.org/W1999469035","https://openalex.org/W2036660342","https://openalex.org/W2949377304","https://openalex.org/W2991007060","https://openalex.org/W2993209354","https://openalex.org/W3008842270","https://openalex.org/W3009171061","https://openalex.org/W3009759929","https://openalex.org/W3009989680","https://openalex.org/W3036059163","https://openalex.org/W3099521899","https://openalex.org/W3160500359","https://openalex.org/W4210744399","https://openalex.org/W4306782465","https://openalex.org/W4317242075","https://openalex.org/W4378574032","https://openalex.org/W4380987983","https://openalex.org/W4386484117","https://openalex.org/W4400513531","https://openalex.org/W4402140074","https://openalex.org/W4404790913"],"related_works":["https://openalex.org/W3097742187","https://openalex.org/W2393894176","https://openalex.org/W2015986068","https://openalex.org/W2371676984","https://openalex.org/W2371612381","https://openalex.org/W2388406033","https://openalex.org/W2360387378","https://openalex.org/W2949569425","https://openalex.org/W2389366936","https://openalex.org/W2129246217"],"abstract_inverted_index":{"Obtaining":[0],"sufficient":[1],"DNA":[2,19,43,63,134,141,171,186,204,227,242],"from":[3,21,66,87,95,103,230],"plant":[4,247],"tissues":[5,28],"is":[6],"essential":[7],"for":[8,110,245],"molecular":[9,47,246],"taxonomy,":[10],"population":[11],"genetics,":[12],"conservation":[13],"biology,":[14],"and":[15,36,45,59,68,130,145,176,200,223,234,249],"forensic":[16,250],"botany.":[17],"However,":[18],"extraction":[20,243],"conifer":[22,79],"species":[23,80],"remains":[24],"challenging":[25],"because":[26],"their":[27],"contain":[29],"high":[30],"concentrations":[31,172,187],"of":[32,56,71,75,164,197,238,241],"polysaccharides,":[33],"polyphenols,":[34],"terpenoids,":[35],"resin":[37],"compounds":[38],"that":[39,219],"may":[40],"interfere":[41],"with":[42,152],"isolation":[44],"downstream":[46],"analyses.":[48],"This":[49],"study":[50],"aimed":[51],"to":[52],"evaluate":[53],"the":[54,76,104,138,153,213,236],"effects":[55,196],"sample":[57,115,198,221],"condition":[58,199,222],"homogenization":[60,122,129,182,201,224],"method":[61,202,225],"on":[62,203],"concentration":[64,228],"obtained":[65,229],"fresh":[67],"dried":[69,174],"needles":[70,233],"Pinus":[72],"brutia,":[73],"one":[74],"most":[77],"widespread":[78],"in":[81,91,184],"T\u00fcrkiye.":[82,93],"Needle":[83],"samples":[84,102,117,168],"were":[85,98,108,118,159],"collected":[86],"24":[88],"individual":[89],"trees":[90,97,107],"\u00c7anakkale,":[92],"Samples":[94],"12":[96,106],"processed":[99,119],"fresh,":[100],"whereas":[101],"remaining":[105],"air-dried":[109],"20":[111],"days.":[112],"Within":[113],"each":[114],"condition,":[116],"using":[120,137,147,161],"two":[121,214],"methods:":[123],"mortar":[124,177],"grinding":[125,178],"followed":[126,179],"by":[127,180],"TissueLyser":[128,181],"blender":[131,189],"homogenization.":[132,190],"Genomic":[133],"was":[135],"extracted":[136],"i-genomic":[139],"Plant":[140],"Extraction":[142],"Mini":[143],"Kit":[144],"quantified":[146],"a":[148,209],"Qubit\u2122":[149],"4":[150],"Fluorometer":[151],"dsDNA":[154],"High":[155],"Sensitivity":[156],"Assay.":[157],"Data":[158],"analyzed":[160],"two-way":[162],"analysis":[163],"variance":[165],"(ANOVA).":[166],"Fresh":[167],"showed":[169],"higher":[170,185],"than":[173,188],"samples,":[175],"resulted":[183],"Two-way":[191],"ANOVA":[192],"demonstrated":[193],"significant":[194,210],"main":[195],"concentration,":[205],"as":[206,208],"well":[207],"interaction":[211],"between":[212],"factors.":[215],"These":[216],"findings":[217],"indicate":[218],"both":[220],"influence":[226],"P.":[231],"brutia":[232],"highlight":[235],"importance":[237],"sample-specific":[239],"optimization":[240],"procedures":[244],"research":[248],"botanical":[251],"applications.":[252]},"counts_by_year":[],"updated_date":"2026-10-26T11:51:55.731654","created_date":"2026-10-13T00:00:00"}
