{"id":"https://openalex.org/W7221012203","doi":"https://doi.org/10.64898/2026.09.29.755032","title":"Genomically and ecologically cohesive subspecies as biologically meaningful units in the global ocean microbiome","display_name":"Genomically and ecologically cohesive subspecies as biologically meaningful units in the global ocean microbiome","publication_year":2026,"publication_date":"2026-10-05","ids":{"openalex":"https://openalex.org/W7221012203","doi":"https://doi.org/10.64898/2026.09.29.755032"},"language":"en","primary_location":{"id":"doi:10.64898/2026.09.29.755032","doi":"https://doi.org/10.64898/2026.09.29.755032","is_oa":true,"landing_page_url":"https://doi.org/10.64898/2026.09.29.755032","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2026/10/05/2026.09.29.755032.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},"volume":null,"type":"preprint","is_traditional":true,"indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.biorxiv.org/content/biorxiv/early/2026/10/05/2026.09.29.755032.full.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065908879","display_name":"Lucas Paoli","orcid":"https://orcid.org/0000-0003-0771-8309","observed_orcids":["https://orcid.org/0000-0003-0771-8309"]},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Lucas Paoli","raw_affiliation_strings":["Department of Microbiology, \u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne, Lausanne, 1015, Switzerland"],"raw_orcid":"https://orcid.org/0000-0003-0771-8309","affiliations":[{"raw_affiliation_string":"Department of Microbiology, \u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne, Lausanne, 1015, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083296321","display_name":"Taylor Priest","orcid":"https://orcid.org/0000-0003-4173-8354","observed_orcids":["https://orcid.org/0000-0003-4173-8354"]},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4405257335","display_name":"Institute of Microbiology","ror":"https://ror.org/0556as610","country_code":"CH","type":"facility","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088","https://openalex.org/I4405257335"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Taylor Priest","raw_affiliation_strings":["Department of Biology, Institute of Microbiology and Swiss Institute of Bioinformatics, ETH Z\u00fcrich, Z\u00fcrich, 8092, Switzerland"],"raw_orcid":"https://orcid.org/0000-0003-4173-8354","affiliations":[{"raw_affiliation_string":"Department of Biology, Institute of Microbiology and Swiss Institute of Bioinformatics, ETH Z\u00fcrich, Z\u00fcrich, 8092, Switzerland","institution_ids":["https://openalex.org/I12708293","https://openalex.org/I35440088","https://openalex.org/I4405257335"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079867150","display_name":"Adri\u00e1n Dav\u00edn","orcid":"https://orcid.org/0000-0003-4945-4938","observed_orcids":["https://orcid.org/0000-0003-4945-4938"]},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4405257335","display_name":"Institute of Microbiology","ror":"https://ror.org/0556as610","country_code":"CH","type":"facility","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088","https://openalex.org/I4405257335"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Adri\u00e1n A. Dav\u00edn","raw_affiliation_strings":["Department of Biology, Institute of Microbiology and Swiss Institute of Bioinformatics, ETH Z\u00fcrich, Z\u00fcrich, 8092, Switzerland"],"raw_orcid":"https://orcid.org/0000-0003-4945-4938","affiliations":[{"raw_affiliation_string":"Department of Biology, Institute of Microbiology and Swiss Institute of Bioinformatics, ETH Z\u00fcrich, Z\u00fcrich, 8092, Switzerland","institution_ids":["https://openalex.org/I12708293","https://openalex.org/I35440088","https://openalex.org/I4405257335"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052616041","display_name":"Melanie L. St\u00e4ubli","orcid":"https://orcid.org/0000-0003-0762-2593","observed_orcids":["https://orcid.org/0000-0003-0762-2593"]},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4405257335","display_name":"Institute of Microbiology","ror":"https://ror.org/0556as610","country_code":"CH","type":"facility","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088","https://openalex.org/I4405257335"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Melanie L. St\u00e4ubli","raw_affiliation_strings":["Department of Biology, Institute of Microbiology and Swiss Institute of Bioinformatics, ETH Z\u00fcrich, Z\u00fcrich, 8092, Switzerland"],"raw_orcid":"https://orcid.org/0000-0003-0762-2593","affiliations":[{"raw_affiliation_string":"Department of Biology, Institute of Microbiology and Swiss Institute of Bioinformatics, ETH Z\u00fcrich, Z\u00fcrich, 8092, Switzerland","institution_ids":["https://openalex.org/I12708293","https://openalex.org/I35440088","https://openalex.org/I4405257335"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014703605","display_name":"Dominic Eriksson","orcid":"https://orcid.org/0009-0002-3280-1059","observed_orcids":["https://orcid.org/0009-0002-3280-1059"]},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4405257012","display_name":"Institute of Biogeochemistry and Pollutant Dynamics","ror":"https://ror.org/04sm24z48","country_code":"CH","type":"facility","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088","https://openalex.org/I4405257012"]},{"id":"https://openalex.org/I4405257335","display_name":"Institute of Microbiology","ror":"https://ror.org/0556as610","country_code":"CH","type":"facility","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088","https://openalex.org/I4405257335"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Dominic Eriksson","raw_affiliation_strings":["Department of Biology, Institute of Microbiology and Swiss Institute of Bioinformatics, ETH Z\u00fcrich, Z\u00fcrich, 8092, Switzerland","Department of Environmental Systems Science, Institute of Biogeochemistry and Pollutant Dynamics, ETH Z\u00fcrich, Z\u00fcrich, 8092, Switzerland"],"raw_orcid":"https://orcid.org/0009-0002-3280-1059","affiliations":[{"raw_affiliation_string":"Department of Biology, Institute of Microbiology and Swiss Institute of Bioinformatics, ETH Z\u00fcrich, Z\u00fcrich, 8092, Switzerland","institution_ids":["https://openalex.org/I12708293","https://openalex.org/I35440088","https://openalex.org/I4405257335"]},{"raw_affiliation_string":"Department of Environmental Systems Science, Institute of Biogeochemistry and Pollutant Dynamics, ETH Z\u00fcrich, Z\u00fcrich, 8092, Switzerland","institution_ids":["https://openalex.org/I35440088","https://openalex.org/I4405257012"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006162777","display_name":"Hans\u2010Joachim Ruscheweyh","orcid":"https://orcid.org/0000-0001-7473-6086","observed_orcids":["https://orcid.org/0000-0001-7473-6086"]},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4405257335","display_name":"Institute of Microbiology","ror":"https://ror.org/0556as610","country_code":"CH","type":"facility","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088","https://openalex.org/I4405257335"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Hans-Joachim Ruscheweyh","raw_affiliation_strings":["Department of Biology, Institute of Microbiology and Swiss Institute of Bioinformatics, ETH Z\u00fcrich, Z\u00fcrich, 8092, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, Institute of Microbiology and Swiss Institute of Bioinformatics, ETH Z\u00fcrich, Z\u00fcrich, 8092, Switzerland","institution_ids":["https://openalex.org/I12708293","https://openalex.org/I35440088","https://openalex.org/I4405257335"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029276946","display_name":"Martin F. Polz","orcid":"https://orcid.org/0000-0001-9296-3733","observed_orcids":["https://orcid.org/0000-0001-9296-3733","https://orcid.org/0000-0002-4975-2946"]},"institutions":[{"id":"https://openalex.org/I129774422","display_name":"University of Vienna","ror":"https://ror.org/03prydq77","country_code":"AT","type":"education","lineage":["https://openalex.org/I129774422"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Martin F. Polz","raw_affiliation_strings":["Division of Microbial Ecology, Centre for Microbiology and Environmental Systems Science, University of Vienna, Vienna, Austria"],"raw_orcid":"https://orcid.org/0000-0002-4975-2946","affiliations":[{"raw_affiliation_string":"Division of Microbial Ecology, Centre for Microbiology and Environmental Systems Science, University of Vienna, Vienna, Austria","institution_ids":["https://openalex.org/I129774422"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5027144722","display_name":"Shinichi Sunagawa","orcid":"https://orcid.org/0000-0003-3065-0314","observed_orcids":["https://orcid.org/0000-0003-3065-0314"]},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4405257335","display_name":"Institute of Microbiology","ror":"https://ror.org/0556as610","country_code":"CH","type":"facility","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088","https://openalex.org/I4405257335"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Shinichi Sunagawa","raw_affiliation_strings":["Department of Biology, Institute of Microbiology and Swiss Institute of Bioinformatics, ETH Z\u00fcrich, Z\u00fcrich, 8092, Switzerland"],"raw_orcid":"https://orcid.org/0000-0003-3065-0314","affiliations":[{"raw_affiliation_string":"Department of Biology, Institute of Microbiology and Swiss Institute of Bioinformatics, ETH Z\u00fcrich, Z\u00fcrich, 8092, Switzerland","institution_ids":["https://openalex.org/I12708293","https://openalex.org/I35440088","https://openalex.org/I4405257335"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5027144722"],"corresponding_institution_ids":["https://openalex.org/I12708293","https://openalex.org/I35440088","https://openalex.org/I4405257335"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.850600004196167,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.850600004196167,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.1298999935388565,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11879","display_name":"Protist diversity and phylogeny","score":0.010599999688565731,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/marine-microbiome","display_name":"marine microbiome","score":0.7630000114440918},{"id":"https://openalex.org/keywords/microbial-diversity","display_name":"microbial diversity","score":0.4819999933242798},{"id":"https://openalex.org/keywords/core-genome","display_name":"core genome","score":0.5410000085830688},{"id":"https://openalex.org/keywords/environmental-selection","display_name":"environmental selection","score":0.3709999918937683},{"id":"https://openalex.org/keywords/temperature","display_name":"temperature","score":0.7730000019073486},{"id":"https://openalex.org/keywords/microbial-evolution","display_name":"microbial evolution","score":0.4480000138282776},{"id":"https://openalex.org/keywords/microbial-ecology","display_name":"microbial ecology","score":0.6110000014305115},{"id":"https://openalex.org/keywords/cultivation-independent-methods","display_name":"cultivation-independent methods","score":0.3659999966621399}],"concepts":[{"id":"https://openalex.org/C17966761","wikidata":"https://www.wikidata.org/wiki/Q68947","display_name":"Subspecies","level":2,"score":0.8443999886512756},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.5504999756813049},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5115000009536743},{"id":"https://openalex.org/C75268714","wikidata":"https://www.wikidata.org/wiki/Q43478","display_name":"Natural selection","level":3,"score":0.42750000953674316},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.421999990940094},{"id":"https://openalex.org/C179768671","wikidata":"https://www.wikidata.org/wiki/Q842388","display_name":"Ecosystem diversity","level":3,"score":0.42089998722076416},{"id":"https://openalex.org/C180916674","wikidata":"https://www.wikidata.org/wiki/Q3711935","display_name":"Diversification (marketing strategy)","level":2,"score":0.4156999886035919},{"id":"https://openalex.org/C2781316041","wikidata":"https://www.wikidata.org/wiki/Q1230584","display_name":"Diversity (politics)","level":2,"score":0.3919999897480011},{"id":"https://openalex.org/C207390915","wikidata":"https://www.wikidata.org/wiki/Q1230525","display_name":"Divergence (linguistics)","level":2,"score":0.3659999966621399},{"id":"https://openalex.org/C14641543","wikidata":"https://www.wikidata.org/wiki/Q553270","display_name":"Group cohesiveness","level":2,"score":0.33559998869895935},{"id":"https://openalex.org/C2778738651","wikidata":"https://www.wikidata.org/wiki/Q16546687","display_name":"Novelty","level":2,"score":0.3352000117301941},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.3149999976158142},{"id":"https://openalex.org/C143121216","wikidata":"https://www.wikidata.org/wiki/Q1330402","display_name":"Microbiome","level":2,"score":0.305400013923645},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.27570000290870667},{"id":"https://openalex.org/C102715595","wikidata":"https://www.wikidata.org/wiki/Q172861","display_name":"Ecological niche","level":3,"score":0.2718999981880188},{"id":"https://openalex.org/C2776608160","wikidata":"https://www.wikidata.org/wiki/Q4785462","display_name":"Natural (archaeology)","level":2,"score":0.26840001344680786},{"id":"https://openalex.org/C62648534","wikidata":"https://www.wikidata.org/wiki/Q706937","display_name":"Species diversity","level":2,"score":0.263700008392334},{"id":"https://openalex.org/C130217890","wikidata":"https://www.wikidata.org/wiki/Q47041","display_name":"Biodiversity","level":2,"score":0.26030001044273376}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.64898/2026.09.29.755032","doi":"https://doi.org/10.64898/2026.09.29.755032","is_oa":true,"landing_page_url":"https://doi.org/10.64898/2026.09.29.755032","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2026/10/05/2026.09.29.755032.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"}],"best_oa_location":{"id":"doi:10.64898/2026.09.29.755032","doi":"https://doi.org/10.64898/2026.09.29.755032","is_oa":true,"landing_page_url":"https://doi.org/10.64898/2026.09.29.755032","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2026/10/05/2026.09.29.755032.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/14","display_name":"Life below water","score":1.0}],"study_designs":[],"awards":[{"id":"https://openalex.org/G6518964311","display_name":"MARINE BIODIVERSITY ASSESSMENT AND PREDICTION ACROSS SPATIAL, TEMPORAL AND HUMAN SCALES","funder_award_id":"101059915","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G9000556809","display_name":"MARINE BIODIVERSITY ASSESSMENT AND PREDICTION ACROSS SPACIAL, TEMPORAL AND HUMAN SCALES","funder_award_id":"22.00255","funder_id":"https://openalex.org/F4320335238","funder_display_name":"Staatssekretariat f\u00fcr Bildung, Forschung und Innovation"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320320924","display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung","ror":"https://ror.org/00yjd3n13"},{"id":"https://openalex.org/F4320335238","display_name":"Staatssekretariat f\u00fcr Bildung, Forschung und Innovation","ror":"https://ror.org/01kw63t33"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W7221012203.pdf","grobid_xml":"https://content.openalex.org/works/W7221012203.grobid-xml"},"referenced_works_count":71,"referenced_works":["https://openalex.org/W1841452201","https://openalex.org/W1925331805","https://openalex.org/W1958058086","https://openalex.org/W1985048665","https://openalex.org/W1986748260","https://openalex.org/W1991604124","https://openalex.org/W1998824347","https://openalex.org/W2016544300","https://openalex.org/W2019655958","https://openalex.org/W2030709910","https://openalex.org/W2037015298","https://openalex.org/W2041579725","https://openalex.org/W2042008515","https://openalex.org/W2045641296","https://openalex.org/W2053664446","https://openalex.org/W2064971934","https://openalex.org/W2069870348","https://openalex.org/W2078785469","https://openalex.org/W2105333758","https://openalex.org/W2126482672","https://openalex.org/W2128777911","https://openalex.org/W2134375163","https://openalex.org/W2149981091","https://openalex.org/W2161017872","https://openalex.org/W2227501310","https://openalex.org/W2340728556","https://openalex.org/W2529873061","https://openalex.org/W2533132894","https://openalex.org/W2586159524","https://openalex.org/W2586360538","https://openalex.org/W2589461950","https://openalex.org/W2601243251","https://openalex.org/W2730979602","https://openalex.org/W2736920791","https://openalex.org/W2760526698","https://openalex.org/W2766239397","https://openalex.org/W2775608308","https://openalex.org/W2801486628","https://openalex.org/W2805238404","https://openalex.org/W2944947596","https://openalex.org/W2951254987","https://openalex.org/W2952982270","https://openalex.org/W2967909152","https://openalex.org/W2971513102","https://openalex.org/W2973794265","https://openalex.org/W2977598705","https://openalex.org/W2995063445","https://openalex.org/W3012598930","https://openalex.org/W3025757981","https://openalex.org/W3034087136","https://openalex.org/W3122118092","https://openalex.org/W3136856146","https://openalex.org/W3157656796","https://openalex.org/W3190196859","https://openalex.org/W3204834823","https://openalex.org/W3205847810","https://openalex.org/W3212385379","https://openalex.org/W3212852449","https://openalex.org/W4283262943","https://openalex.org/W4307973222","https://openalex.org/W4308882189","https://openalex.org/W4321480991","https://openalex.org/W4389626322","https://openalex.org/W4390501810","https://openalex.org/W4390918604","https://openalex.org/W4392595494","https://openalex.org/W4404246564","https://openalex.org/W7128421213","https://openalex.org/W7155567441","https://openalex.org/W7160419994","https://openalex.org/W7162207432"],"related_works":["https://openalex.org/W3068064012","https://openalex.org/W4293660648","https://openalex.org/W7213262000","https://openalex.org/W2135329955","https://openalex.org/W2065212701","https://openalex.org/W4399025823","https://openalex.org/W7165822843","https://openalex.org/W4404392746","https://openalex.org/W2587554391","https://openalex.org/W4323050312"],"abstract_inverted_index":{"Abstract":[0],"Microbial":[1],"diversity":[2,125],"is":[3,51],"organised":[4],"into":[5],"operationally":[6],"defined":[7],"species.":[8],"However,":[9],"it":[10],"remains":[11],"unclear":[12],"whether":[13],"these,":[14],"or":[15],"finer-scale":[16],"groups":[17],"represent":[18],"biologically":[19,107],"meaningful":[20,108],"units":[21],"in":[22,44,73,126],"natural":[23],"communities.":[24],"Here,":[25],"we":[26],"implement":[27],"a":[28,74,110],"scalable,":[29],"cultivation-independent":[30],"framework":[31],"to":[32],"identify":[33],"724":[34],"genomically":[35],"discrete":[36],"and":[37,62,100,116,122],"ecologically":[38],"cohesive":[39],"subspecies":[40,84,105],"across":[41],"270":[42],"species":[43,82],"the":[45,58,81,127],"global":[46],"ocean":[47],"microbiome.":[48],"Their":[49],"diversification":[50],"underpinned":[52],"by":[53,63],"gene-specific,":[54],"nucleotide-level":[55],"selection":[56],"on":[57],"core":[59],"genomic":[60,98],"backbone":[61],"variable":[64],"restructuring":[65],"of":[66,70,80,97],"gene":[67],"content,":[68],"both":[69],"which":[71,114],"proceed":[72],"subspecies-specific":[75],"manner.":[76],"In":[77],"over":[78],"half":[79],"tested,":[83],"were":[85],"significantly":[86],"associated":[87],"with":[88],"distinct":[89],"environmental":[90],"conditions,":[91],"most":[92],"frequently":[93],"temperature.":[94],"This":[95],"coupling":[96],"discreteness":[99],"ecological":[101,115],"cohesiveness":[102],"positions":[103],"these":[104],"as":[106],"units,":[109],"fundamental":[111],"level":[112],"at":[113],"evolutionary":[117],"processes":[118],"jointly":[119],"drive":[120],"divergence":[121],"structure":[123],"microbial":[124],"oceans.":[128]},"counts_by_year":[],"updated_date":"2026-11-09T13:22:03.289127","created_date":"2026-10-09T00:00:00"}