{"id":"https://openalex.org/W7214396987","doi":"https://doi.org/10.64898/2026.09.22.753549","title":"\u03c0-MNovo improves de novo peptide sequencing through microbial-domain adaptation and evidence-guided candidate selection","display_name":"\u03c0-MNovo improves de novo peptide sequencing through microbial-domain adaptation and evidence-guided candidate selection","publication_year":2026,"publication_date":"2026-09-24","ids":{"openalex":"https://openalex.org/W7214396987","doi":"https://doi.org/10.64898/2026.09.22.753549"},"language":"en","primary_location":{"id":"doi:10.64898/2026.09.22.753549","doi":"https://doi.org/10.64898/2026.09.22.753549","is_oa":true,"landing_page_url":"https://doi.org/10.64898/2026.09.22.753549","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2026/09/24/2026.09.22.753549.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},"volume":null,"type":"preprint","is_traditional":true,"indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.biorxiv.org/content/biorxiv/early/2026/09/24/2026.09.22.753549.full.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103064992","display_name":"Jingwen Ye","orcid":"https://orcid.org/0000-0003-0596-0804","observed_orcids":["https://orcid.org/0000-0003-0596-0804"]},"institutions":[{"id":"https://openalex.org/I61565387","display_name":"Dalian Minzu University","ror":"https://ror.org/02hxfx521","country_code":"CN","type":"education","lineage":["https://openalex.org/I61565387"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jingwen Ye","raw_affiliation_strings":["Dalian Minzu University, Dalian 116600, China","State Key Laboratory of Medical Proteomics, National Center for Protein Sciences (Beijing), Beijing 102206, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dalian Minzu University, Dalian 116600, China","institution_ids":["https://openalex.org/I61565387"]},{"raw_affiliation_string":"State Key Laboratory of Medical Proteomics, National Center for Protein Sciences (Beijing), Beijing 102206, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5152787209","display_name":"Xing Zhang","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Xin Zhang","raw_affiliation_strings":["State Key Laboratory of Medical Proteomics, National Center for Protein Sciences (Beijing), Beijing 102206, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Medical Proteomics, National Center for Protein Sciences (Beijing), Beijing 102206, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112960763","display_name":"Boyan Sun","orcid":"https://orcid.org/0009-0002-7325-3909","observed_orcids":["https://orcid.org/0009-0002-7325-3909"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Boyan Sun","raw_affiliation_strings":["State Key Laboratory of Medical Proteomics, National Center for Protein Sciences (Beijing), Beijing 102206, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Medical Proteomics, National Center for Protein Sciences (Beijing), Beijing 102206, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072520554","display_name":"Tianze Ling","orcid":"https://orcid.org/0009-0006-6715-2553","observed_orcids":["https://orcid.org/0009-0006-6715-2553"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tianze Ling","raw_affiliation_strings":["State Key Laboratory of Medical Proteomics, National Center for Protein Sciences (Beijing), Beijing 102206, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Medical Proteomics, National Center for Protein Sciences (Beijing), Beijing 102206, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041899053","display_name":"Zhendong Liang","orcid":"https://orcid.org/0000-0002-5653-3821","observed_orcids":["https://orcid.org/0000-0002-5653-3821"]},"institutions":[{"id":"https://openalex.org/I4210136793","display_name":"Peng Cheng Laboratory","ror":"https://ror.org/03qdqbt06","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210136793"]},{"id":"https://openalex.org/I4405263052","display_name":"Tsinghua Shenzhen International Graduate School","ror":"https://ror.org/01vceef04","country_code":"CN","type":"education","lineage":["https://openalex.org/I4405263052","https://openalex.org/I99065089"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhendong Liang","raw_affiliation_strings":["Peng Cheng Laboratory, Shenzhen 518055, China","Tsinghua Shenzhen International Graduate School, Shenzhen 518055, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Peng Cheng Laboratory, Shenzhen 518055, China","institution_ids":["https://openalex.org/I4210136793"]},{"raw_affiliation_string":"Tsinghua Shenzhen International Graduate School, Shenzhen 518055, China","institution_ids":["https://openalex.org/I4405263052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102217491","display_name":"Jingyi Dong","orcid":"https://orcid.org/0009-0009-4947-5991","observed_orcids":["https://orcid.org/0009-0009-4947-5991"]},"institutions":[{"id":"https://openalex.org/I43337087","display_name":"Hebei University","ror":"https://ror.org/01p884a79","country_code":"CN","type":"education","lineage":["https://openalex.org/I43337087"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jingyi Dong","raw_affiliation_strings":["Hebei University, Baoding 071002, China","State Key Laboratory of Medical Proteomics, National Center for Protein Sciences (Beijing), Beijing 102206, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hebei University, Baoding 071002, China","institution_ids":["https://openalex.org/I43337087"]},{"raw_affiliation_string":"State Key Laboratory of Medical Proteomics, National Center for Protein Sciences (Beijing), Beijing 102206, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089810850","display_name":"Yuan Zheng","orcid":"https://orcid.org/0009-0009-2456-5413","observed_orcids":["https://orcid.org/0009-0009-2456-5413"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yuan Zheng","raw_affiliation_strings":["State Key Laboratory of Medical Proteomics, National Center for Protein Sciences (Beijing), Beijing 102206, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Medical Proteomics, National Center for Protein Sciences (Beijing), Beijing 102206, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045973583","display_name":"Hui Jin","orcid":"https://orcid.org/0000-0001-8004-2662","observed_orcids":["https://orcid.org/0000-0001-8004-2662"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hui Jin","raw_affiliation_strings":["State Key Laboratory of Medical Proteomics, National Center for Protein Sciences (Beijing), Beijing 102206, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Medical Proteomics, National Center for Protein Sciences (Beijing), Beijing 102206, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5152864409","display_name":"Liming Jin","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I61565387","display_name":"Dalian Minzu University","ror":"https://ror.org/02hxfx521","country_code":"CN","type":"education","lineage":["https://openalex.org/I61565387"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Liming Jin","raw_affiliation_strings":["Dalian Minzu University, Dalian 116600, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dalian Minzu University, Dalian 116600, China","institution_ids":["https://openalex.org/I61565387"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084873420","display_name":"Zikai Hao","orcid":"https://orcid.org/0000-0003-2957-4844","observed_orcids":["https://orcid.org/0000-0003-2957-4844"]},"institutions":[{"id":"https://openalex.org/I125839683","display_name":"Beijing Institute of Technology","ror":"https://ror.org/01skt4w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I125839683","https://openalex.org/I890469752"]},{"id":"https://openalex.org/I890469752","display_name":"Ministry of Industry and Information Technology","ror":"https://ror.org/0385nmy68","country_code":"CN","type":"government","lineage":["https://openalex.org/I890469752"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zikai Hao","raw_affiliation_strings":["Key Laboratory of Molecular Medicine and Biotherapy, The Ministry of Industry and Information Technology, School of Life Science, Beijing Institute of Technology, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Molecular Medicine and Biotherapy, The Ministry of Industry and Information Technology, School of Life Science, Beijing Institute of Technology, Beijing, China","institution_ids":["https://openalex.org/I125839683","https://openalex.org/I890469752"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043886470","display_name":"Leyuan Li","orcid":"https://orcid.org/0000-0003-2063-4441","observed_orcids":["https://orcid.org/0000-0003-2063-4441"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Leyuan Li","raw_affiliation_strings":["State Key Laboratory of Medical Proteomics, National Center for Protein Sciences (Beijing), Beijing 102206, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Medical Proteomics, National Center for Protein Sciences (Beijing), Beijing 102206, China","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5152860894","display_name":"Cheng Chang","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Cheng Chang","raw_affiliation_strings":["State Key Laboratory of Medical Proteomics, National Center for Protein Sciences (Beijing), Beijing 102206, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Medical Proteomics, National Center for Protein Sciences (Beijing), Beijing 102206, China","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5152860894"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":0.00139999995008111,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.0012000000569969416,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/de-novo-peptide-sequencing","display_name":"de novo peptide sequencing","score":0.9129999876022339},{"id":"https://openalex.org/keywords/metaproteomics","display_name":"metaproteomics","score":0.9129999876022339},{"id":"https://openalex.org/keywords/microbial-proteome","display_name":"microbial proteome","score":0.40799999237060547},{"id":"https://openalex.org/keywords/synthetic-microbial-communities","display_name":"synthetic microbial communities","score":0.6830000281333923},{"id":"https://openalex.org/keywords/taxonomic-coverage","display_name":"taxonomic coverage","score":0.6259999871253967}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7484999895095825},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6581000089645386},{"id":"https://openalex.org/C2779281246","wikidata":"https://www.wikidata.org/wiki/Q172847","display_name":"Peptide","level":2,"score":0.6089000105857849},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.5442000031471252},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.5188999772071838},{"id":"https://openalex.org/C139807058","wikidata":"https://www.wikidata.org/wiki/Q352374","display_name":"Adaptation (eye)","level":2,"score":0.5011000037193298},{"id":"https://openalex.org/C188198153","wikidata":"https://www.wikidata.org/wiki/Q1613840","display_name":"Limiting","level":2,"score":0.44190001487731934},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.39910000562667847},{"id":"https://openalex.org/C199465337","wikidata":"https://www.wikidata.org/wiki/Q6823168","display_name":"Metaproteomics","level":4,"score":0.3937000036239624},{"id":"https://openalex.org/C132917006","wikidata":"https://www.wikidata.org/wiki/Q5250436","display_name":"Deep sequencing","level":4,"score":0.3822000026702881},{"id":"https://openalex.org/C24432333","wikidata":"https://www.wikidata.org/wiki/Q2068526","display_name":"Whole genome sequencing","level":4,"score":0.3301999866962433},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.3276999890804291},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.32670000195503235},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.2994999885559082},{"id":"https://openalex.org/C31827203","wikidata":"https://www.wikidata.org/wiki/Q874296","display_name":"Tandem mass spectrometry","level":3,"score":0.2973000109195709},{"id":"https://openalex.org/C145741570","wikidata":"https://www.wikidata.org/wiki/Q7251534","display_name":"Proteogenomics","level":5,"score":0.28519999980926514},{"id":"https://openalex.org/C61053724","wikidata":"https://www.wikidata.org/wiki/Q1154615","display_name":"Sequence analysis","level":3,"score":0.2721000015735626},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2703999876976013},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.26820001006126404},{"id":"https://openalex.org/C86153913","wikidata":"https://www.wikidata.org/wiki/Q7682439","display_name":"Tandem mass tag","level":5,"score":0.2632000148296356},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.25459998846054077},{"id":"https://openalex.org/C27149982","wikidata":"https://www.wikidata.org/wiki/Q3456514","display_name":"Tandem repeat","level":4,"score":0.2540000081062317}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.64898/2026.09.22.753549","doi":"https://doi.org/10.64898/2026.09.22.753549","is_oa":true,"landing_page_url":"https://doi.org/10.64898/2026.09.22.753549","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2026/09/24/2026.09.22.753549.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"}],"best_oa_location":{"id":"doi:10.64898/2026.09.22.753549","doi":"https://doi.org/10.64898/2026.09.22.753549","is_oa":true,"landing_page_url":"https://doi.org/10.64898/2026.09.22.753549","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2026/09/24/2026.09.22.753549.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G5916381533","display_name":null,"funder_award_id":"2025YFA1309200","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"}],"funders":[{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W7214396987.pdf","grobid_xml":"https://content.openalex.org/works/W7214396987.grobid-xml"},"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4384454317","https://openalex.org/W4380992241","https://openalex.org/W2937258105","https://openalex.org/W7220676429","https://openalex.org/W7150955934","https://openalex.org/W2956118338","https://openalex.org/W4398160571","https://openalex.org/W4413698753","https://openalex.org/W4407037034","https://openalex.org/W2110847899"],"abstract_inverted_index":{"Abstract":[0],"The":[1],"high":[2],"taxonomic":[3,189],"and":[4,68,116,178,221],"strain-level":[5],"diversity":[6],"of":[7,225],"microbial":[8,73,80,96,131],"communities":[9],"makes":[10],"it":[11],"difficult":[12],"for":[13,52,114,229],"reference":[14,46],"databases":[15],"to":[16,72,110,130,137,161],"fully":[17],"represent":[18],"the":[19,112,154,195,223],"protein":[20],"sequences":[21,37],"present":[22],"in":[23,170],"metaproteomic":[24,184,230],"samples,":[25],"limiting":[26],"database-dependent":[27],"peptide":[28,32,36,50,99,119,140,219],"identification.":[29],"De":[30],"novo":[31,58,227],"sequencing":[33,59,141,228],"can":[34],"recover":[35],"directly":[38],"from":[39,64,93,101],"tandem":[40,90],"mass":[41,91],"spectra":[42,92,132],"without":[43],"relying":[44],"on":[45],"databases,":[47],"providing":[48],"complementary":[49],"evidence":[51,220],"metaproteomics.":[53],"However,":[54],"most":[55],"existing":[56],"de":[57,226],"models":[60,167],"were":[61],"developed":[62,125],"largely":[63],"non-microbial":[65],"proteomic":[66],"data":[67],"lack":[69],"specific":[70],"adaptation":[71,129],"spectra.":[74],"Here,":[75],"we":[76,124],"established":[77],"a":[78,144],"dedicated":[79],"spectral":[81],"resource":[82],"comprising":[83],"more":[84,117],"than":[85],"10":[86],"million":[87],"annotated":[88],"high-quality":[89],"72":[94],"cultured":[95],"isolates,":[97],"with":[98,133,173],"digests":[100],"each":[102],"isolate":[103],"separated":[104],"into":[105],"five":[106],"high-pH":[107],"reversed-phase":[108],"fractions":[109],"increase":[111],"opportunity":[113],"deeper":[115],"diverse":[118],"sampling.":[120],"Using":[121],"this":[122],"resource,":[123],"\u03c0-MNovo,":[126],"which":[127],"combines":[128],"evidence-guided":[134],"candidate":[135],"selection":[136],"improve":[138],"full-length":[139],"precision.":[142],"On":[143],"seven-species":[145],"external":[146],"benchmark,":[147],"\u03c0-MNovo":[148,186,202,216],"achieved":[149],"66.30%":[150],"complete-peptide":[151,157],"recall":[152],"under":[153],"same":[155],"residue-mass-based":[156],"matching":[158],"criterion":[159],"applied":[160],"all":[162],"models,":[163],"exceeding":[164],"four":[165],"published":[166],"by":[168],"6.9\u201321.7%":[169],"relative":[171],"recall,":[172],"consistent":[174],"gains":[175],"across":[176],"species":[177],"peptide-length":[179],"groups.":[180],"In":[181],"two":[182],"independent":[183],"datasets,":[185],"increased":[187],"reference-supported":[188],"coverage,":[190],"while":[191],"synthetic-community":[192],"analysis":[193],"recapitulated":[194],"designed":[196],"abundance":[197],"ranking.":[198],"From":[199],"pFind-unidentified":[200],"spectra,":[201],"recovered":[203],"1,587":[204],"pFind-unreported,":[205],"reference-matched":[206],"peptides":[207],"that":[208,215],"passed":[209],"spectrum-evidence":[210],"filtering.":[211],"These":[212],"results":[213],"show":[214],"expands":[217],"recoverable":[218],"enhances":[222],"utility":[224],"analysis.":[231]},"counts_by_year":[],"updated_date":"2026-11-09T13:22:03.289127","created_date":"2026-09-26T00:00:00"}