{"id":"https://openalex.org/W7214101641","doi":"https://doi.org/10.5281/zenodo.22901017","title":"Analysis code and derived data for the bone-defect repair network-pharmacology study","display_name":"Analysis code and derived data for the bone-defect repair network-pharmacology study","publication_year":2026,"publication_date":"2026-09-23","ids":{"openalex":"https://openalex.org/W7214101641","doi":"https://doi.org/10.5281/zenodo.22901017"},"language":null,"primary_location":{"id":"doi:10.5281/zenodo.22901017","doi":"https://doi.org/10.5281/zenodo.22901017","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.22901017","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Software"},"volume":null,"type":"software","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.5281/zenodo.22901017","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5023853696","display_name":"Parhat Yasin","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yasin, Parhat","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5125570212","display_name":"Aikeshanjiang Ailiyaer","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ailiyaer, Aikeshanjiang","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5152536826","display_name":"Jie Sheng","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sheng, Jie","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5152543172","display_name":"Rashid Abdugheni","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Abdugheni, Rashid","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5152543014","display_name":"Xinghua Song","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Song, Xinghua","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.4975999891757965,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.4975999891757965,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11219","display_name":"Bone Metabolism and Diseases","score":0.07609999924898148,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.05950000137090683,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/bone-defect-reconstruction","display_name":"bone defect repair","score":0.9779999852180481},{"id":"https://openalex.org/keywords/gut-microbiota","display_name":"gut microbiota","score":0.7129999995231628},{"id":"https://openalex.org/keywords/microbial-metabolites","display_name":"microbial metabolites","score":0.9860000014305115},{"id":"https://openalex.org/keywords/host-microbe-interactions","display_name":"host-microbe interactions","score":0.9549999833106995},{"id":"https://openalex.org/keywords/network-pharmacology","display_name":"network pharmacology","score":0.9860000014305115},{"id":"https://openalex.org/keywords/consensus-networks","display_name":"consensus networks","score":0.33799999952316284},{"id":"https://openalex.org/keywords/evidence-classification","display_name":"classification of evidence","score":0.4300000071525574}],"concepts":[{"id":"https://openalex.org/C2778202681","wikidata":"https://www.wikidata.org/wiki/Q8034663","display_name":"Workbook","level":2,"score":0.8450000286102295},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7542999982833862},{"id":"https://openalex.org/C61423126","wikidata":"https://www.wikidata.org/wiki/Q187432","display_name":"Scripting language","level":2,"score":0.7343999743461609},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.6952999830245972},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.6596999764442444},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.42149999737739563},{"id":"https://openalex.org/C55439883","wikidata":"https://www.wikidata.org/wiki/Q360812","display_name":"Correctness","level":2,"score":0.39969998598098755},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.38190001249313354},{"id":"https://openalex.org/C183115368","wikidata":"https://www.wikidata.org/wiki/Q856577","display_name":"Weighting","level":2,"score":0.3537999987602234},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3314000070095062},{"id":"https://openalex.org/C45235069","wikidata":"https://www.wikidata.org/wiki/Q278425","display_name":"Table (database)","level":2,"score":0.311599999666214},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.30079999566078186},{"id":"https://openalex.org/C2777737414","wikidata":"https://www.wikidata.org/wiki/Q4868296","display_name":"Font","level":2,"score":0.266400009393692},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.2624000012874603},{"id":"https://openalex.org/C151578736","wikidata":"https://www.wikidata.org/wiki/Q1251793","display_name":"Redundant code","level":4,"score":0.25609999895095825},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.2556999921798706}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.5281/zenodo.22901017","doi":"https://doi.org/10.5281/zenodo.22901017","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.22901017","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Software"},{"id":"doi:10.5281/zenodo.22901018","doi":"https://doi.org/10.5281/zenodo.22901018","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.22901018","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Software"}],"best_oa_location":{"id":"doi:10.5281/zenodo.22901017","doi":"https://doi.org/10.5281/zenodo.22901017","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.22901017","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Software"},"sustainable_development_goals":[],"sustainable_development_goals_aurora":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"Analysis":[0],"code":[1,64],"and":[2,26,34,42,61,78,80],"derived":[3,24],"data":[4,59],"tables":[5,25],"supporting":[6],"the":[7,36,54,75],"manuscript":[8],"on":[9,53,84],"gut":[10],"microbial":[11],"metabolite-host":[12],"interactions":[13],"in":[14],"bone":[15],"defect":[16],"repair.":[17],"The":[18,50,67],"archive":[19],"contains":[20],"one":[21],"workbook":[22,33,56],"of":[23],"two":[27],"short":[28,48],"scripts":[29,51],"that":[30,32],"read":[31],"recompute":[35],"reported":[37],"same-pair":[38],"consensus,":[39],"evidence-class,":[40],"convergent-target":[41],"weighting":[43],"numbers,":[44],"together":[45],"with":[46],"a":[47],"README.":[49],"run":[52],"deposited":[55],"alone;":[57],"no":[58,62],"retrieval":[60],"figure-generation":[63],"is":[65,69,72],"included.":[66],"record":[68],"restricted:":[70],"access":[71],"granted":[73],"to":[74,81],"journal's":[76],"editors":[77],"reviewers":[79],"other":[82],"readers":[83],"reasonable":[85],"request.":[86]},"counts_by_year":[],"updated_date":"2026-10-09T09:14:12.587421","created_date":"2026-09-24T00:00:00"}