{"id":"https://openalex.org/W7213672273","doi":"https://doi.org/10.64898/2026.09.16.751965","title":"Drinking water treatment drastically modifies multi-kingdom water communities, but clinically relevant opportunistic bacterial pathogens persist","display_name":"Drinking water treatment drastically modifies multi-kingdom water communities, but clinically relevant opportunistic bacterial pathogens persist","publication_year":2026,"publication_date":"2026-09-18","ids":{"openalex":"https://openalex.org/W7213672273","doi":"https://doi.org/10.64898/2026.09.16.751965"},"language":"en","primary_location":{"id":"doi:10.64898/2026.09.16.751965","doi":"https://doi.org/10.64898/2026.09.16.751965","is_oa":true,"landing_page_url":"https://doi.org/10.64898/2026.09.16.751965","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2026/09/18/2026.09.16.751965.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},"volume":null,"type":"preprint","is_traditional":true,"indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.biorxiv.org/content/biorxiv/early/2026/09/18/2026.09.16.751965.full.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5061891766","display_name":"Pierre Foucault","orcid":"https://orcid.org/0000-0002-1123-8431","observed_orcids":["https://orcid.org/0000-0002-1123-8431"]},"institutions":[{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Pierre Foucault","raw_affiliation_strings":["Institut Pasteur, Universit\u00e9 de Paris, Unit\u00e9 Biologie des Bact\u00e9ries Intracellulaires, 75015 Paris, France"],"raw_orcid":"https://orcid.org/0000-0002-1123-8431","affiliations":[{"raw_affiliation_string":"Institut Pasteur, Universit\u00e9 de Paris, Unit\u00e9 Biologie des Bact\u00e9ries Intracellulaires, 75015 Paris, France","institution_ids":["https://openalex.org/I157536573","https://openalex.org/I204730241"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064997741","display_name":"Ana Elena P\u00e9rez\u2010Cobas","orcid":"https://orcid.org/0000-0002-3995-5571","observed_orcids":["https://orcid.org/0000-0002-3995-5571"]},"institutions":[{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Ana Elena P\u00e9rez-Cobas","raw_affiliation_strings":["Institut Pasteur, Universit\u00e9 de Paris, Unit\u00e9 Biologie des Bact\u00e9ries Intracellulaires, 75015 Paris, France"],"raw_orcid":"https://orcid.org/0000-0002-3995-5571","affiliations":[{"raw_affiliation_string":"Institut Pasteur, Universit\u00e9 de Paris, Unit\u00e9 Biologie des Bact\u00e9ries Intracellulaires, 75015 Paris, France","institution_ids":["https://openalex.org/I157536573","https://openalex.org/I204730241"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5132879882","display_name":"Madalina ABABII","orcid":"https://orcid.org/0009-0008-8119-7891","observed_orcids":["https://orcid.org/0009-0008-8119-7891"]},"institutions":[{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Madalina Ababii","raw_affiliation_strings":["Institut Pasteur, Universit\u00e9 de Paris, Unit\u00e9 Biologie des Bact\u00e9ries Intracellulaires, 75015 Paris, France"],"raw_orcid":"https://orcid.org/0009-0008-8119-7891","affiliations":[{"raw_affiliation_string":"Institut Pasteur, Universit\u00e9 de Paris, Unit\u00e9 Biologie des Bact\u00e9ries Intracellulaires, 75015 Paris, France","institution_ids":["https://openalex.org/I157536573","https://openalex.org/I204730241"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042200207","display_name":"Jes\u00fas Mar\u00edn\u2010Miret","orcid":"https://orcid.org/0000-0002-7042-631X","observed_orcids":["https://orcid.org/0000-0002-7042-631X","https://orcid.org/0000-0002-5534-405X"]},"institutions":[{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jesus Marin-Miret","raw_affiliation_strings":["Institut Pasteur, Universit\u00e9 de Paris, Unit\u00e9 Biologie des Bact\u00e9ries Intracellulaires, 75015 Paris, France"],"raw_orcid":"https://orcid.org/0000-0002-7042-631X","affiliations":[{"raw_affiliation_string":"Institut Pasteur, Universit\u00e9 de Paris, Unit\u00e9 Biologie des Bact\u00e9ries Intracellulaires, 75015 Paris, France","institution_ids":["https://openalex.org/I157536573","https://openalex.org/I204730241"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024257457","display_name":"S\u00e9bastien Wurtzer","orcid":"https://orcid.org/0000-0002-9628-1075","observed_orcids":["https://orcid.org/0000-0002-9628-1075"]},"institutions":[{"id":"https://openalex.org/I4210148169","display_name":"Eau de Paris (France)","ror":"https://ror.org/04beck307","country_code":"FR","type":"company","lineage":["https://openalex.org/I4210148169"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Sebastien Wurtzer","raw_affiliation_strings":["Direction de La Recherche, du D\u00e9veloppement Et de La Qualit\u00e9 de L\u2019Eau, Eau de Paris, 33 Avenue Jean Jaur\u00e8s, 94200, Ivry-Sur-Seine, France"],"raw_orcid":"https://orcid.org/0000-0002-9628-1075","affiliations":[{"raw_affiliation_string":"Direction de La Recherche, du D\u00e9veloppement Et de La Qualit\u00e9 de L\u2019Eau, Eau de Paris, 33 Avenue Jean Jaur\u00e8s, 94200, Ivry-Sur-Seine, France","institution_ids":["https://openalex.org/I4210148169"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086586498","display_name":"Laurent Moulin","orcid":"https://orcid.org/0000-0001-5162-7215","observed_orcids":["https://orcid.org/0000-0001-5162-7215"]},"institutions":[{"id":"https://openalex.org/I4210148169","display_name":"Eau de Paris (France)","ror":"https://ror.org/04beck307","country_code":"FR","type":"company","lineage":["https://openalex.org/I4210148169"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Laurent Moulin","raw_affiliation_strings":["Direction de La Recherche, du D\u00e9veloppement Et de La Qualit\u00e9 de L\u2019Eau, Eau de Paris, 33 Avenue Jean Jaur\u00e8s, 94200, Ivry-Sur-Seine, France"],"raw_orcid":"https://orcid.org/0000-0001-5162-7215","affiliations":[{"raw_affiliation_string":"Direction de La Recherche, du D\u00e9veloppement Et de La Qualit\u00e9 de L\u2019Eau, Eau de Paris, 33 Avenue Jean Jaur\u00e8s, 94200, Ivry-Sur-Seine, France","institution_ids":["https://openalex.org/I4210148169"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087862105","display_name":"Carmen Buchrieser","orcid":"https://orcid.org/0000-0003-3477-9190","observed_orcids":["https://orcid.org/0000-0003-3477-9190"]},"institutions":[{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Carmen Buchrieser","raw_affiliation_strings":["Institut Pasteur, Universit\u00e9 de Paris, Unit\u00e9 Biologie des Bact\u00e9ries Intracellulaires, 75015 Paris, France"],"raw_orcid":"https://orcid.org/0000-0003-3477-9190","affiliations":[{"raw_affiliation_string":"Institut Pasteur, Universit\u00e9 de Paris, Unit\u00e9 Biologie des Bact\u00e9ries Intracellulaires, 75015 Paris, France","institution_ids":["https://openalex.org/I157536573","https://openalex.org/I204730241"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5029808456","display_name":"Laura G\u00f3mez-Valero","orcid":"https://orcid.org/0000-0003-3459-6802","observed_orcids":["https://orcid.org/0000-0003-3459-6802"]},"institutions":[{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Laura Gomez-Valero","raw_affiliation_strings":["Institut Pasteur, Universit\u00e9 de Paris, Unit\u00e9 Biologie des Bact\u00e9ries Intracellulaires, 75015 Paris, France"],"raw_orcid":"https://orcid.org/0000-0003-3459-6802","affiliations":[{"raw_affiliation_string":"Institut Pasteur, Universit\u00e9 de Paris, Unit\u00e9 Biologie des Bact\u00e9ries Intracellulaires, 75015 Paris, France","institution_ids":["https://openalex.org/I157536573","https://openalex.org/I204730241"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5029808456"],"corresponding_institution_ids":["https://openalex.org/I157536573","https://openalex.org/I204730241"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11493","display_name":"Water Treatment and Disinfection","score":0.5327000021934509,"subfield":{"id":"https://openalex.org/subfields/2307","display_name":"Health, Toxicology and Mutagenesis"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11493","display_name":"Water Treatment and Disinfection","score":0.5327000021934509,"subfield":{"id":"https://openalex.org/subfields/2307","display_name":"Health, Toxicology and Mutagenesis"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11916","display_name":"Legionella and Acanthamoeba research","score":0.3337000012397766,"subfield":{"id":"https://openalex.org/subfields/1310","display_name":"Endocrinology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.044599998742341995,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/drinking-water-microbiome","display_name":"drinking water microbiome","score":0.9240000247955322},{"id":"https://openalex.org/keywords/water-treatment","display_name":"water treatment","score":0.7960000038146973},{"id":"https://openalex.org/keywords/opportunistic-bacterial-pathogens","display_name":"opportunistic bacteria","score":0.9599999785423279},{"id":"https://openalex.org/keywords/legionella","display_name":"Legionella","score":0.9800000190734863},{"id":"https://openalex.org/keywords/pseudomonas","display_name":"Pseudomonas","score":0.9470000267028809},{"id":"https://openalex.org/keywords/nontuberculous-mycobacteria","display_name":"nontuberculous mycobacteria","score":0.9490000009536743},{"id":"https://openalex.org/keywords/legionella-pneumophila","display_name":"Legionella pneumophila","score":0.8830000162124634},{"id":"https://openalex.org/keywords/pseudomonas-aeruginosa","display_name":"Pseudomonas aeruginosa","score":0.9700000286102295},{"id":"https://openalex.org/keywords/groundwater","display_name":"groundwater","score":0.5619999766349792},{"id":"https://openalex.org/keywords/river-water","display_name":"river water","score":0.996999979019165},{"id":"https://openalex.org/keywords/microbial-community-diversity","display_name":"microbial community diversity","score":0.6290000081062317},{"id":"https://openalex.org/keywords/waterborne-pathogens","display_name":"waterborne pathogens","score":0.4790000021457672},{"id":"https://openalex.org/keywords/seasonal-variation","display_name":"seasonal variation","score":0.4050000011920929}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6800000071525574},{"id":"https://openalex.org/C2776114971","wikidata":"https://www.wikidata.org/wiki/Q2006636","display_name":"Waterborne diseases","level":3,"score":0.6456000208854675},{"id":"https://openalex.org/C190960625","wikidata":"https://www.wikidata.org/wiki/Q1058719","display_name":"Water treatment","level":2,"score":0.578000009059906},{"id":"https://openalex.org/C2779164008","wikidata":"https://www.wikidata.org/wiki/Q158013","display_name":"Legionella","level":3,"score":0.5573999881744385},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.4341000020503998},{"id":"https://openalex.org/C143121216","wikidata":"https://www.wikidata.org/wiki/Q1330402","display_name":"Microbiome","level":2,"score":0.4318999946117401},{"id":"https://openalex.org/C2776118409","wikidata":"https://www.wikidata.org/wiki/Q147885","display_name":"Legionella pneumophila","level":3,"score":0.42340001463890076},{"id":"https://openalex.org/C2781463711","wikidata":"https://www.wikidata.org/wiki/Q131143","display_name":"Pseudomonas","level":3,"score":0.4180999994277954},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.40869998931884766},{"id":"https://openalex.org/C2777637488","wikidata":"https://www.wikidata.org/wiki/Q31856","display_name":"Pseudomonas aeruginosa","level":3,"score":0.4072999954223633},{"id":"https://openalex.org/C175605896","wikidata":"https://www.wikidata.org/wiki/Q39833","display_name":"Microorganism","level":3,"score":0.3785000145435333},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.37229999899864197},{"id":"https://openalex.org/C81407943","wikidata":"https://www.wikidata.org/wiki/Q17149178","display_name":"Microbial population biology","level":3,"score":0.35989999771118164},{"id":"https://openalex.org/C69562835","wikidata":"https://www.wikidata.org/wiki/Q3054637","display_name":"Microbial ecology","level":3,"score":0.34139999747276306},{"id":"https://openalex.org/C2991804310","wikidata":"https://www.wikidata.org/wiki/Q1061108","display_name":"Water source","level":2,"score":0.33219999074935913},{"id":"https://openalex.org/C122325731","wikidata":"https://www.wikidata.org/wiki/Q3738459","display_name":"Relative species abundance","level":3,"score":0.32749998569488525},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.32739999890327454},{"id":"https://openalex.org/C90195498","wikidata":"https://www.wikidata.org/wiki/Q183129","display_name":"Water pollution","level":2,"score":0.31779998540878296},{"id":"https://openalex.org/C111687972","wikidata":"https://www.wikidata.org/wiki/Q832131","display_name":"Raw water","level":2,"score":0.3154999911785126},{"id":"https://openalex.org/C2780797713","wikidata":"https://www.wikidata.org/wiki/Q625376","display_name":"Water quality","level":2,"score":0.30869999527931213},{"id":"https://openalex.org/C76177295","wikidata":"https://www.wikidata.org/wiki/Q161598","display_name":"Groundwater","level":2,"score":0.29249998927116394},{"id":"https://openalex.org/C130217890","wikidata":"https://www.wikidata.org/wiki/Q47041","display_name":"Biodiversity","level":2,"score":0.2849999964237213},{"id":"https://openalex.org/C2778883795","wikidata":"https://www.wikidata.org/wiki/Q804517","display_name":"Pathogenic bacteria","level":3,"score":0.2784999907016754},{"id":"https://openalex.org/C8625798","wikidata":"https://www.wikidata.org/wiki/Q752112","display_name":"Surface water","level":2,"score":0.2752000093460083},{"id":"https://openalex.org/C174160445","wikidata":"https://www.wikidata.org/wiki/Q27980903","display_name":"Phylotype","level":4,"score":0.2728999853134155},{"id":"https://openalex.org/C112570922","wikidata":"https://www.wikidata.org/wiki/Q60528603","display_name":"Contamination","level":2,"score":0.2646999955177307},{"id":"https://openalex.org/C175327387","wikidata":"https://www.wikidata.org/wiki/Q3289906","display_name":"Aquatic ecosystem","level":2,"score":0.26019999384880066},{"id":"https://openalex.org/C24527192","wikidata":"https://www.wikidata.org/wiki/Q17149729","display_name":"Human pathogen","level":3,"score":0.2556000053882599},{"id":"https://openalex.org/C58123911","wikidata":"https://www.wikidata.org/wiki/Q467410","display_name":"Biofilm","level":3,"score":0.25450000166893005}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.64898/2026.09.16.751965","doi":"https://doi.org/10.64898/2026.09.16.751965","is_oa":true,"landing_page_url":"https://doi.org/10.64898/2026.09.16.751965","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2026/09/18/2026.09.16.751965.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"}],"best_oa_location":{"id":"doi:10.64898/2026.09.16.751965","doi":"https://doi.org/10.64898/2026.09.16.751965","is_oa":true,"landing_page_url":"https://doi.org/10.64898/2026.09.16.751965","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2026/09/18/2026.09.16.751965.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},"sustainable_development_goals":[{"display_name":"Clean water and sanitation","score":1.0,"id":"https://metadata.un.org/sdg/6"},{"display_name":"Good health and well-being","score":0.8048999905586243,"id":"https://metadata.un.org/sdg/3"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G1418548345","display_name":null,"funder_award_id":"ANR-10-LABX-62-IBEID","funder_id":"https://openalex.org/F4320321589","funder_display_name":"Fondation pour la Recherche M\u00e9dicale"},{"id":"https://openalex.org/G1979782309","display_name":null,"funder_award_id":"10-LABX-62-IBEID","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G282427092","display_name":null,"funder_award_id":"ANR\u201010\u2010LABX\u201062\u2010IBEID","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G3256177976","display_name":null,"funder_award_id":"LABX-62-IBEID","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G3375804402","display_name":null,"funder_award_id":"PI23/01036","funder_id":"https://openalex.org/F4320313831","funder_display_name":"Comunidad de Madrid"},{"id":"https://openalex.org/G3442306288","display_name":null,"funder_award_id":"ANR-10-LABX-62-IBEID","funder_id":"https://openalex.org/F4320322892","funder_display_name":"Centre National de la Recherche Scientifique"},{"id":"https://openalex.org/G4844375865","display_name":null,"funder_award_id":"EQU202503020066","funder_id":"https://openalex.org/F4320321589","funder_display_name":"Fondation pour la Recherche M\u00e9dicale"},{"id":"https://openalex.org/G486969537","display_name":"From the source to the user end: deciphering the impact of microbiome and water parameters on opportunistic waterborne pathogens","funder_award_id":"ANR-23-CE35-0016","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G6078429397","display_name":null,"funder_award_id":"2023\u2010T1/SAL\u2010GL28953","funder_id":"https://openalex.org/F4320313831","funder_display_name":"Comunidad de Madrid"},{"id":"https://openalex.org/G7080048889","display_name":null,"funder_award_id":"ANR-23","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G7240651115","display_name":null,"funder_award_id":"ANR-10","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G7376787254","display_name":null,"funder_award_id":"ANR-10-LABX","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G7838947372","display_name":null,"funder_award_id":"ANR-10-LABX-62-IBEID","funder_id":"https://openalex.org/F4320320893","funder_display_name":"Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale"},{"id":"https://openalex.org/G7839788094","display_name":null,"funder_award_id":"10-LABX-62-IBEID","funder_id":"https://openalex.org/F4320322892","funder_display_name":"Centre National de la Recherche Scientifique"},{"id":"https://openalex.org/G8172803556","display_name":null,"funder_award_id":"ANR-10-LABX-62","funder_id":"https://openalex.org/F4320322892","funder_display_name":"Centre National de la Recherche Scientifique"},{"id":"https://openalex.org/G8528475877","display_name":"El microbioma respiratorio, oral e intestinal en las neumon\u00edas intrahospitalarias (MICRO-MUSKETEERS)","funder_award_id":"PI23/01036","funder_id":"https://openalex.org/F4320334923","funder_display_name":"Instituto de Salud Carlos III"},{"id":"https://openalex.org/G8670608220","display_name":null,"funder_award_id":"ANR-10-LABX-62","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320313831","display_name":"Comunidad de Madrid","ror":null},{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320320893","display_name":"Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale","ror":"https://ror.org/02vjkv261"},{"id":"https://openalex.org/F4320321589","display_name":"Fondation pour la Recherche M\u00e9dicale","ror":"https://ror.org/04w6kn183"},{"id":"https://openalex.org/F4320322892","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73"},{"id":"https://openalex.org/F4320330232","display_name":"Sorbonne Universit\u00e9","ror":null},{"id":"https://openalex.org/F4320334923","display_name":"Instituto de Salud Carlos III","ror":"https://ror.org/00ca2c886"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W7213672273.pdf","grobid_xml":"https://content.openalex.org/works/W7213672273.grobid-xml"},"referenced_works_count":56,"referenced_works":["https://openalex.org/W1952026831","https://openalex.org/W1966324749","https://openalex.org/W1972625253","https://openalex.org/W2013869704","https://openalex.org/W2032433726","https://openalex.org/W2072136731","https://openalex.org/W2091627137","https://openalex.org/W2102157182","https://openalex.org/W2103210653","https://openalex.org/W2114392707","https://openalex.org/W2131427475","https://openalex.org/W2140472941","https://openalex.org/W2142678478","https://openalex.org/W2170614562","https://openalex.org/W2518524041","https://openalex.org/W2564930944","https://openalex.org/W2592292910","https://openalex.org/W2758913549","https://openalex.org/W2771507432","https://openalex.org/W2774202347","https://openalex.org/W2776841116","https://openalex.org/W2888614866","https://openalex.org/W2891719035","https://openalex.org/W2895908741","https://openalex.org/W2925960912","https://openalex.org/W2970353876","https://openalex.org/W3009543471","https://openalex.org/W3012626598","https://openalex.org/W3094077816","https://openalex.org/W3116770058","https://openalex.org/W3119511132","https://openalex.org/W3164350240","https://openalex.org/W3194748990","https://openalex.org/W3209178480","https://openalex.org/W3211805452","https://openalex.org/W4200346078","https://openalex.org/W4205432816","https://openalex.org/W4224228571","https://openalex.org/W4225783834","https://openalex.org/W4310923015","https://openalex.org/W4321746750","https://openalex.org/W4382403081","https://openalex.org/W4385406869","https://openalex.org/W4385949371","https://openalex.org/W4390611907","https://openalex.org/W4391305590","https://openalex.org/W4394785938","https://openalex.org/W4396620229","https://openalex.org/W4401393733","https://openalex.org/W4404199592","https://openalex.org/W4410775010","https://openalex.org/W4411836970","https://openalex.org/W4414443830","https://openalex.org/W4415469270","https://openalex.org/W4415477701","https://openalex.org/W6967726778"],"related_works":["https://openalex.org/W2904400637","https://openalex.org/W2892518143","https://openalex.org/W2616322335","https://openalex.org/W4205432816","https://openalex.org/W4389154587","https://openalex.org/W4223959914","https://openalex.org/W2774202347","https://openalex.org/W2617529814","https://openalex.org/W3183491747","https://openalex.org/W2897529595"],"abstract_inverted_index":{"Abstract":[0],"Controlling":[1],"pathogenic":[2,176],"microorganisms":[3],"during":[4],"water":[5,19,27,43,103,106,120,147,222,234],"treatment":[6,22,107,111,152,226],"processes":[7,23,153,227],"is":[8],"a":[9,45,65,85,113,164],"major":[10],"public":[11],"health":[12],"concern.":[13],"However,":[14],"the":[15,25,39,129,160,198,202,229,232,237],"impact":[16],"of":[17,41,132,156,170,197,206,231],"different":[18],"sources":[20],"and":[21,29,47,50,67,73,81,104,137,166,179,204,225],"on":[24,116],"drinking":[26,233],"microbiome":[28],"opportunistic":[30,213,244],"bacterial":[31,127,245],"pathogens":[32,246],"remains":[33],"poorly":[34],"understood.":[35],"Here,":[36],"we":[37],"report":[38],"analyses":[40,162],"two":[42],"systems:":[44],"river":[46,102],"groundwater":[48,95],"source,":[49],"their":[51,188,248],"corresponding":[52],"treated":[53],"waters,":[54],"sampled":[55],"bi-weekly":[56],"for":[57,79,242],"6":[58],"months.":[59],"Microbial":[60],"communities":[61,93],"were":[62,96,182],"analysed":[63],"through":[64],"metabarcoding":[66],"dPCR":[68],"workflow":[69],"coupling":[70],"universal":[71],"prokaryotic":[72],"eukaryotic":[74,199,207],"primers":[75,78],"with":[76,210],"genus-targeting":[77,161],"Legionella":[80,133,171],"Pseudomonas":[82,135,177],"to":[83,190,192],"achieve":[84],"deep":[86],"taxonomic":[87,239],"resolution.":[88],"We":[89],"show":[90],"that":[91,105,150],"microbial":[92],"in":[94,101,184],"more":[97],"diverse":[98,193],"than":[99,119],"those":[100],"affected":[108],"\u03b1-diversity.":[109],"Water":[110],"had":[112],"stronger":[114],"influence":[115,228],"community":[117],"composition":[118,230],"system":[121],"or":[122,143],"seasonal":[123],"variation.":[124],"Despite":[125],"lower":[126],"loads,":[128],"relative":[130],"abundance":[131],",":[134,136,175],"non-tuberculous":[138],"Mycobacteria":[139],"(NTM)":[140],"remained":[141],"stable":[142],"even":[144],"increased":[145],"after":[146],"treatment,":[148],"suggesting":[149],"conventional":[151],"promote":[154],"enrichment":[155],"specific":[157],"taxa.":[158],"Excitingly,":[159],"revealed":[163],"remarkable":[165],"previously":[167],"uncharacterized":[168],"diversity":[169],"species.":[172],"L.":[173],"pneumophila":[174],"clades":[178],"P.":[180],"aeruginosa":[181],"detected":[183],"all":[185],"environments,":[186],"emphasizing":[187],"ability":[189],"adapt":[191],"ecological":[194,249],"conditions.":[195],"Analysis":[196],"fraction":[200],"emphasized":[201],"persistence":[203],"emergence":[205],"hosts":[208],"associated":[209],"these":[211],"waterborne":[212,243],"pathogens.":[214],"Our":[215],"findings":[216],"offer":[217],"important":[218],"insights":[219],"into":[220],"how":[221],"source":[223],"characteristics":[224],"microbiome,":[235],"while":[236],"high":[238],"resolution":[240],"achieved":[241],"underscores":[247],"adaptability.":[250]},"counts_by_year":[{"year":2026,"cited_by_count":1}],"updated_date":"2026-11-09T13:22:03.289127","created_date":"2026-09-20T00:00:00"}