{"id":"https://openalex.org/W7208837689","doi":"https://doi.org/10.1016/j.ese.2026.100759","title":"Global intI1 abundance quantifies livestock antimicrobial-resistance risk","display_name":"Global intI1 abundance quantifies livestock antimicrobial-resistance risk","publication_year":2026,"publication_date":"2026-09-01","ids":{"openalex":"https://openalex.org/W7208837689","doi":"https://doi.org/10.1016/j.ese.2026.100759","pmid":"https://pubmed.ncbi.nlm.nih.gov/42756860","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/13583708"},"language":"en","primary_location":{"id":"doi:10.1016/j.ese.2026.100759","doi":"https://doi.org/10.1016/j.ese.2026.100759","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.ese.2026.100759","pdf_url":"https://www.sciencedirect.com/science/article/pii/S2666498426001043/pdf","source":{"id":"https://openalex.org/S4210228708","display_name":"Environmental Science and Ecotechnology","issn_l":"2096-9643","issn":["2096-9643","2666-4984"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","jufo-1","norway-1","oarl","poland-20","vabb-shw"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Environmental Science and Ecotechnology","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.sciencedirect.com/science/article/pii/S2666498426001043/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5074793560","display_name":"Chengcheng Yao","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I89652312","display_name":"Northwest A&F University","ror":"https://ror.org/0051rme32","country_code":"CN","type":"education","lineage":["https://openalex.org/I89652312"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chengcheng Yao","raw_affiliation_strings":["College of Natural Resources and Environment, Northwest A&F University, Shaanxi, 712100, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Natural Resources and Environment, Northwest A&F University, Shaanxi, 712100, China","institution_ids":["https://openalex.org/I89652312"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022971440","display_name":"Liusheng Lei","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I89652312","display_name":"Northwest A&F University","ror":"https://ror.org/0051rme32","country_code":"CN","type":"education","lineage":["https://openalex.org/I89652312"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Liusheng Lei","raw_affiliation_strings":["College of Natural Resources and Environment, Northwest A&F University, Shaanxi, 712100, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Natural Resources and Environment, Northwest A&F University, Shaanxi, 712100, China","institution_ids":["https://openalex.org/I89652312"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5139351332","display_name":"Wenyan Wang","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I89652312","display_name":"Northwest A&F University","ror":"https://ror.org/0051rme32","country_code":"CN","type":"education","lineage":["https://openalex.org/I89652312"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wenyan Wang","raw_affiliation_strings":["College of Natural Resources and Environment, Northwest A&F University, Shaanxi, 712100, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Natural Resources and Environment, Northwest A&F University, Shaanxi, 712100, China","institution_ids":["https://openalex.org/I89652312"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5150102100","display_name":"Lan Jiang","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I89652312","display_name":"Northwest A&F University","ror":"https://ror.org/0051rme32","country_code":"CN","type":"education","lineage":["https://openalex.org/I89652312"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lan Jiang","raw_affiliation_strings":["College of Natural Resources and Environment, Northwest A&F University, Shaanxi, 712100, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Natural Resources and Environment, Northwest A&F University, Shaanxi, 712100, China","institution_ids":["https://openalex.org/I89652312"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5139321838","display_name":"Wenshan Yang","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I89652312","display_name":"Northwest A&F University","ror":"https://ror.org/0051rme32","country_code":"CN","type":"education","lineage":["https://openalex.org/I89652312"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wenshan Yang","raw_affiliation_strings":["College of Natural Resources and Environment, Northwest A&F University, Shaanxi, 712100, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Natural Resources and Environment, Northwest A&F University, Shaanxi, 712100, China","institution_ids":["https://openalex.org/I89652312"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073057151","display_name":"Yaqi Sheng","orcid":"https://orcid.org/0000-0002-1711-9177","observed_orcids":["https://orcid.org/0000-0002-1711-9177"]},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yaqi Sheng","raw_affiliation_strings":["College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, 310058, China","State Key Laboratory of Soil Pollution Control and Safety, Zhejiang University, Hangzhou, 310058, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, 310058, China","institution_ids":["https://openalex.org/I76130692"]},{"raw_affiliation_string":"State Key Laboratory of Soil Pollution Control and Safety, Zhejiang University, Hangzhou, 310058, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086848189","display_name":"Zishu Liu","orcid":"https://orcid.org/0000-0001-6820-4593","observed_orcids":["https://orcid.org/0000-0001-6820-4593"]},"institutions":[{"id":"https://openalex.org/I89652312","display_name":"Northwest A&F University","ror":"https://ror.org/0051rme32","country_code":"CN","type":"education","lineage":["https://openalex.org/I89652312"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Zishu Liu","raw_affiliation_strings":["College of Natural Resources and Environment, Northwest A&F University, Shaanxi, 712100, China"],"raw_orcid":"https://orcid.org/0000-0001-6820-4593","affiliations":[{"raw_affiliation_string":"College of Natural Resources and Environment, Northwest A&F University, Shaanxi, 712100, China","institution_ids":["https://openalex.org/I89652312"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101842661","display_name":"Xun Qian","orcid":"https://orcid.org/0000-0003-0102-535X","observed_orcids":["https://orcid.org/0000-0003-0102-535X"]},"institutions":[{"id":"https://openalex.org/I89652312","display_name":"Northwest A&F University","ror":"https://ror.org/0051rme32","country_code":"CN","type":"education","lineage":["https://openalex.org/I89652312"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xun Qian","raw_affiliation_strings":["College of Natural Resources and Environment, Northwest A&F University, Shaanxi, 712100, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Natural Resources and Environment, Northwest A&F University, Shaanxi, 712100, China","institution_ids":["https://openalex.org/I89652312"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5086848189","https://openalex.org/A5101842661"],"corresponding_institution_ids":["https://openalex.org/I89652312"],"apc_list":{"value":2000,"currency":"USD","value_usd":2000},"apc_paid":{"value":2000,"currency":"USD","value_usd":2000},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.58774194,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"33","issue":null,"first_page":"100759","last_page":"100759"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10147","display_name":"Antibiotic Resistance in Bacteria","score":0.8945000171661377,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10147","display_name":"Antibiotic Resistance in Bacteria","score":0.8945000171661377,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10419","display_name":"Pharmaceutical and Antibiotic Environmental Impacts","score":0.06989999860525131,"subfield":{"id":"https://openalex.org/subfields/2310","display_name":"Pollution"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10897","display_name":"Antibiotic Use and Resistance","score":0.031599998474121094,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/antimicrobial-resistance","display_name":"antimicrobial resistance","score":0.7820000052452087},{"id":"https://openalex.org/keywords/class-1-integron","display_name":"class 1 integron","score":0.8389999866485596},{"id":"https://openalex.org/keywords/livestock","display_name":"livestock","score":0.6430000066757202},{"id":"https://openalex.org/keywords/horizontal-gene-transfer","display_name":"horizontal gene transfer","score":0.7850000262260437},{"id":"https://openalex.org/keywords/plasmids","display_name":"plasmids","score":0.8209999799728394},{"id":"https://openalex.org/keywords/transposable-elements","display_name":"transposable elements","score":0.7990000247955322},{"id":"https://openalex.org/keywords/iscr","display_name":"IscR","score":0.6869999766349792},{"id":"https://openalex.org/keywords/one-health-surveillance","display_name":"One Health surveillance","score":0.7210000157356262},{"id":"https://openalex.org/keywords/early-warning-systems","display_name":"early warning systems","score":0.5910000205039978},{"id":"https://openalex.org/keywords/metagenomics","display_name":"metagenomics","score":0.5680000185966492}],"concepts":[{"id":"https://openalex.org/C112964050","wikidata":"https://www.wikidata.org/wiki/Q103459","display_name":"Livestock","level":2,"score":0.7674999833106995},{"id":"https://openalex.org/C77077793","wikidata":"https://www.wikidata.org/wiki/Q336019","display_name":"Abundance (ecology)","level":2,"score":0.5293999910354614},{"id":"https://openalex.org/C2780148112","wikidata":"https://www.wikidata.org/wiki/Q1432581","display_name":"Proxy (statistics)","level":2,"score":0.4943999946117401},{"id":"https://openalex.org/C39432304","wikidata":"https://www.wikidata.org/wiki/Q188847","display_name":"Environmental science","level":0,"score":0.48559999465942383},{"id":"https://openalex.org/C12174686","wikidata":"https://www.wikidata.org/wiki/Q1058438","display_name":"Risk assessment","level":2,"score":0.35670000314712524},{"id":"https://openalex.org/C122325731","wikidata":"https://www.wikidata.org/wiki/Q3738459","display_name":"Relative species abundance","level":3,"score":0.3522999882698059},{"id":"https://openalex.org/C107826830","wikidata":"https://www.wikidata.org/wiki/Q929380","display_name":"Environmental resource management","level":1,"score":0.29899999499320984},{"id":"https://openalex.org/C165064840","wikidata":"https://www.wikidata.org/wiki/Q1321061","display_name":"Matching (statistics)","level":2,"score":0.2953000068664551},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.2913999855518341},{"id":"https://openalex.org/C32896092","wikidata":"https://www.wikidata.org/wiki/Q189447","display_name":"Risk management","level":2,"score":0.29019999504089355},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.2718000113964081},{"id":"https://openalex.org/C118518473","wikidata":"https://www.wikidata.org/wiki/Q11451","display_name":"Agriculture","level":2,"score":0.2687000036239624},{"id":"https://openalex.org/C112930515","wikidata":"https://www.wikidata.org/wiki/Q4389547","display_name":"Risk analysis (engineering)","level":1,"score":0.26759999990463257},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.26600000262260437},{"id":"https://openalex.org/C150903083","wikidata":"https://www.wikidata.org/wiki/Q7108","display_name":"Biotechnology","level":1,"score":0.2630000114440918},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.2540000081062317},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.25270000100135803}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1016/j.ese.2026.100759","doi":"https://doi.org/10.1016/j.ese.2026.100759","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.ese.2026.100759","pdf_url":"https://www.sciencedirect.com/science/article/pii/S2666498426001043/pdf","source":{"id":"https://openalex.org/S4210228708","display_name":"Environmental Science and Ecotechnology","issn_l":"2096-9643","issn":["2096-9643","2666-4984"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","jufo-1","norway-1","oarl","poland-20","vabb-shw"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Environmental Science and Ecotechnology","raw_type":"journal-article"},{"id":"pmid:42756860","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/42756860","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Environmental science and ecotechnology","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:13583708","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC13583708/pdf/main.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Environ Sci Ecotechnol","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:5bfc1cc63fd246a4bb6c4048b9087746","doi":null,"is_oa":false,"landing_page_url":"https://doaj.org/article/5bfc1cc63fd246a4bb6c4048b9087746","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Environmental Science and Ecotechnology, Vol 33, Iss , Pp 100759- (2026)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1016/j.ese.2026.100759","doi":"https://doi.org/10.1016/j.ese.2026.100759","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.ese.2026.100759","pdf_url":"https://www.sciencedirect.com/science/article/pii/S2666498426001043/pdf","source":{"id":"https://openalex.org/S4210228708","display_name":"Environmental Science and Ecotechnology","issn_l":"2096-9643","issn":["2096-9643","2666-4984"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","jufo-1","norway-1","oarl","poland-20","vabb-shw"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Environmental Science and Ecotechnology","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.875,"display_name":"Zero hunger","id":"https://metadata.un.org/sdg/2"},{"score":0.6240000128746033,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G1914710018","display_name":null,"funder_award_id":"2024RS-CXTD-68","funder_id":"https://openalex.org/F4320335802","funder_display_name":"Shaanxi Key Science and Technology Innovation Team Project"},{"id":"https://openalex.org/G4181101859","display_name":null,"funder_award_id":"2025RS-CXTD-032","funder_id":"https://openalex.org/F4320335802","funder_display_name":"Shaanxi Key Science and Technology Innovation Team Project"},{"id":"https://openalex.org/G4354420989","display_name":null,"funder_award_id":"42277412","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4593466736","display_name":null,"funder_award_id":"22193061","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335802","display_name":"Shaanxi Key Science and Technology Innovation Team Project","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W7208837689.pdf","grobid_xml":"https://content.openalex.org/works/W7208837689.grobid-xml"},"referenced_works_count":59,"referenced_works":["https://openalex.org/W999371333","https://openalex.org/W1987621130","https://openalex.org/W1990524884","https://openalex.org/W2003602856","https://openalex.org/W2005232892","https://openalex.org/W2008811033","https://openalex.org/W2027184506","https://openalex.org/W2045204781","https://openalex.org/W2045318821","https://openalex.org/W2050116248","https://openalex.org/W2056941041","https://openalex.org/W2064983847","https://openalex.org/W2100883553","https://openalex.org/W2123505432","https://openalex.org/W2144203006","https://openalex.org/W2162825747","https://openalex.org/W2582227287","https://openalex.org/W2606203739","https://openalex.org/W2606917991","https://openalex.org/W2623330179","https://openalex.org/W2792342164","https://openalex.org/W2809280069","https://openalex.org/W2896537918","https://openalex.org/W2950954328","https://openalex.org/W2986925300","https://openalex.org/W2995945950","https://openalex.org/W3005235420","https://openalex.org/W3009737049","https://openalex.org/W3016171331","https://openalex.org/W3044276482","https://openalex.org/W3157791054","https://openalex.org/W3184970149","https://openalex.org/W3199421355","https://openalex.org/W4206493579","https://openalex.org/W4220927247","https://openalex.org/W4220961986","https://openalex.org/W4235879813","https://openalex.org/W4309191898","https://openalex.org/W4311307349","https://openalex.org/W4313254871","https://openalex.org/W4317871408","https://openalex.org/W4322505820","https://openalex.org/W4387765391","https://openalex.org/W4388410058","https://openalex.org/W4394768600","https://openalex.org/W4402557213","https://openalex.org/W4403395756","https://openalex.org/W4409370201","https://openalex.org/W4410991974","https://openalex.org/W4412687362","https://openalex.org/W4414222406","https://openalex.org/W4414335704","https://openalex.org/W4414614604","https://openalex.org/W7116908491","https://openalex.org/W7116921003","https://openalex.org/W7118129487","https://openalex.org/W7125514762","https://openalex.org/W7125966776","https://openalex.org/W7130337404"],"related_works":["https://openalex.org/W7007954227","https://openalex.org/W3209308655","https://openalex.org/W4411763967","https://openalex.org/W7155746757","https://openalex.org/W4319311110","https://openalex.org/W2759922832","https://openalex.org/W7056050742","https://openalex.org/W2944508720","https://openalex.org/W7166665469","https://openalex.org/W7214722331"],"abstract_inverted_index":{"Livestock":[0],"farming":[1],"environments":[2],"are":[3,129],"major":[4],"reservoirs":[5],"of":[6,65,74],"antimicrobial":[7],"resistance":[8],"(AMR),":[9],"yet":[10],"scalable":[11],"genetic":[12],"indicators":[13],"that":[14,62,104,114,126,188],"quantitatively":[15],"capture":[16,30],"both":[17],"abundance":[18,64,107,153],"and":[19,35,88,96,110,125,139,154,172,196],"dissemination":[20,134],"potential":[21],"remain":[22],"limited.":[23],"Class":[24,81],"1":[25,67,82,106,152,182],"integrons":[26],"(CL1s)":[27],"integrate":[28],"gene":[29],"with":[31,131,157],"horizontal":[32],"transfer":[33],"capacity":[34],"have":[36],"been":[37,54],"proposed":[38],"as":[39,44,69,183],"candidates,":[40],"but":[41],"their":[42,132],"suitability":[43],"a":[45,70,79,184],"direct":[46],"proxy":[47,187],"for":[48],"livestock-associated":[49,75],"AMR":[50,76],"risk":[51,112,156],"has":[52],"not":[53],"rigorously":[55],"tested":[56],"at":[57],"scale.":[58],"Here":[59],"we":[60,102],"show":[61],"the":[63],"intI":[66,105,151,181],"functions":[68],"robust":[71],"quantitative":[72],"indicator":[73],"risk.":[77],"Using":[78],"custom":[80],"Integrase":[83],"Database":[84],"expanded":[85],"by":[86,136],"63.5%":[87],"integrating":[89],"4,017":[90],"livestock":[91,115],"metagenomes,":[92],"9,625":[93],"isolate":[94],"genomes,":[95,101],"approximately":[97],"1.2":[98],"million":[99],"clinical":[100,123],"demonstrate":[103],"tracks":[108],"host-":[109],"geography-dependent":[111],"patterns,":[113],"CL1s":[116],"carry":[117],"compact,":[118],"conserved":[119],"resistance-cassette":[120],"arrays":[121],"matching":[122],"spectra,":[124],"nearly":[127],"all":[128],"plasmid-borne,":[130],"efficient":[133],"facilitated":[135],"Tn402-,":[137],"ISCR-,":[138],"IS110-family":[140],"elements.":[141],"A":[142],"random-forest":[143],"model":[144],"trained":[145],"on":[146],"these":[147],"data":[148],"predicts":[149],"global":[150],"associated":[155],"high":[158],"accuracy":[159],"(":[160],"R":[161],"2":[162],"=":[163],"0.93),":[164],"revealing":[165],"persistent":[166],"hotspots":[167],"across":[168],"Asia,":[169],"sub-Saharan":[170],"Africa,":[171],"South":[173],"America":[174],"over":[175],"two":[176],"decades.":[177],"These":[178],"findings":[179],"establish":[180],"practical,":[185],"single-platform":[186],"can":[189],"be":[190],"incorporated":[191],"into":[192],"One":[193],"Health":[194],"surveillance":[195],"early-warning":[197],"systems.":[198]},"counts_by_year":[],"updated_date":"2026-10-29T09:56:32.521200","created_date":"2026-09-06T00:00:00"}
