{"id":"https://openalex.org/W7204209584","doi":"https://doi.org/10.1016/j.bbrep.2026.102723","title":"metaKEGG: A comprehensive algorithm package to visualize multi-omics pathway enrichment","display_name":"metaKEGG: A comprehensive algorithm package to visualize multi-omics pathway enrichment","publication_year":2026,"publication_date":"2026-08-25","ids":{"openalex":"https://openalex.org/W7204209584","doi":"https://doi.org/10.1016/j.bbrep.2026.102723","pmid":"https://pubmed.ncbi.nlm.nih.gov/42698931"},"language":"en","primary_location":{"id":"doi:10.1016/j.bbrep.2026.102723","doi":"https://doi.org/10.1016/j.bbrep.2026.102723","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.bbrep.2026.102723","pdf_url":null,"source":{"id":"https://openalex.org/S2764640729","display_name":"Biochemistry and Biophysics Reports","issn_l":"2405-5808","issn":["2405-5808"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-d","jufo-1","ki-jl-1","norway-1","poland-40"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Biochemistry and Biophysics Reports","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1016/j.bbrep.2026.102723","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5095774023","display_name":"Michail Lazaratos","orcid":"https://orcid.org/0000-0001-7587-6769","observed_orcids":["https://orcid.org/0000-0001-7587-6769"]},"institutions":[{"id":"https://openalex.org/I4210160326","display_name":"German Center for Diabetes Research","ror":"https://ror.org/04qq88z54","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210160326","https://openalex.org/I4405256427"]},{"id":"https://openalex.org/I4210162705","display_name":"German Institute of Human Nutrition","ror":"https://ror.org/05xdczy51","country_code":"DE","type":"facility","lineage":["https://openalex.org/I315704651","https://openalex.org/I4210162705"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Michail Lazaratos","raw_affiliation_strings":["Department of Experimental Diabetology, German Institute of Human Nutrition Potsdam-Rehbruecke, Nuthetal, Germany","German Center for Diabetes Research (DZD e.V.), M\u00fcnchen-Neuherberg, M\u00fcnchen, Germany"],"raw_orcid":"https://orcid.org/0000-0001-7587-6769","affiliations":[{"raw_affiliation_string":"Department of Experimental Diabetology, German Institute of Human Nutrition Potsdam-Rehbruecke, Nuthetal, Germany","institution_ids":["https://openalex.org/I4210162705"]},{"raw_affiliation_string":"German Center for Diabetes Research (DZD e.V.), M\u00fcnchen-Neuherberg, M\u00fcnchen, Germany","institution_ids":["https://openalex.org/I4210160326"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091772309","display_name":"Neele Haacke","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210160326","display_name":"German Center for Diabetes Research","ror":"https://ror.org/04qq88z54","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210160326","https://openalex.org/I4405256427"]},{"id":"https://openalex.org/I4210162705","display_name":"German Institute of Human Nutrition","ror":"https://ror.org/05xdczy51","country_code":"DE","type":"facility","lineage":["https://openalex.org/I315704651","https://openalex.org/I4210162705"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Neele Haacke","raw_affiliation_strings":["Department of Experimental Diabetology, German Institute of Human Nutrition Potsdam-Rehbruecke, Nuthetal, Germany","German Center for Diabetes Research (DZD e.V.), M\u00fcnchen-Neuherberg, M\u00fcnchen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Experimental Diabetology, German Institute of Human Nutrition Potsdam-Rehbruecke, Nuthetal, Germany","institution_ids":["https://openalex.org/I4210162705"]},{"raw_affiliation_string":"German Center for Diabetes Research (DZD e.V.), M\u00fcnchen-Neuherberg, M\u00fcnchen, Germany","institution_ids":["https://openalex.org/I4210160326"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040297710","display_name":"Jasmin Gaugel","orcid":"https://orcid.org/0000-0002-8658-833X","observed_orcids":["https://orcid.org/0000-0002-8658-833X"]},"institutions":[{"id":"https://openalex.org/I4210160326","display_name":"German Center for Diabetes Research","ror":"https://ror.org/04qq88z54","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210160326","https://openalex.org/I4405256427"]},{"id":"https://openalex.org/I4210162705","display_name":"German Institute of Human Nutrition","ror":"https://ror.org/05xdczy51","country_code":"DE","type":"facility","lineage":["https://openalex.org/I315704651","https://openalex.org/I4210162705"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Jasmin Gaugel","raw_affiliation_strings":["Department of Experimental Diabetology, German Institute of Human Nutrition Potsdam-Rehbruecke, Nuthetal, Germany","German Center for Diabetes Research (DZD e.V.), M\u00fcnchen-Neuherberg, M\u00fcnchen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Experimental Diabetology, German Institute of Human Nutrition Potsdam-Rehbruecke, Nuthetal, Germany","institution_ids":["https://openalex.org/I4210162705"]},{"raw_affiliation_string":"German Center for Diabetes Research (DZD e.V.), M\u00fcnchen-Neuherberg, M\u00fcnchen, Germany","institution_ids":["https://openalex.org/I4210160326"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5133763711","display_name":"Miriam Ulz","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210160326","display_name":"German Center for Diabetes Research","ror":"https://ror.org/04qq88z54","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210160326","https://openalex.org/I4405256427"]},{"id":"https://openalex.org/I4210162705","display_name":"German Institute of Human Nutrition","ror":"https://ror.org/05xdczy51","country_code":"DE","type":"facility","lineage":["https://openalex.org/I315704651","https://openalex.org/I4210162705"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Miriam Ulz","raw_affiliation_strings":["Department of Experimental Diabetology, German Institute of Human Nutrition Potsdam-Rehbruecke, Nuthetal, Germany","German Center for Diabetes Research (DZD e.V.), M\u00fcnchen-Neuherberg, M\u00fcnchen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Experimental Diabetology, German Institute of Human Nutrition Potsdam-Rehbruecke, Nuthetal, Germany","institution_ids":["https://openalex.org/I4210162705"]},{"raw_affiliation_string":"German Center for Diabetes Research (DZD e.V.), M\u00fcnchen-Neuherberg, M\u00fcnchen, Germany","institution_ids":["https://openalex.org/I4210160326"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035476171","display_name":"Tim Bleimehl","orcid":"https://orcid.org/0000-0002-2060-3920","observed_orcids":["https://orcid.org/0000-0002-2060-3920"]},"institutions":[{"id":"https://openalex.org/I4210160326","display_name":"German Center for Diabetes Research","ror":"https://ror.org/04qq88z54","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210160326","https://openalex.org/I4405256427"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Tim Bleimehl","raw_affiliation_strings":["German Center for Diabetes Research (DZD e.V.), M\u00fcnchen-Neuherberg, M\u00fcnchen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"German Center for Diabetes Research (DZD e.V.), M\u00fcnchen-Neuherberg, M\u00fcnchen, Germany","institution_ids":["https://openalex.org/I4210160326"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034433869","display_name":"Justus T\u00e4ger","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210160326","display_name":"German Center for Diabetes Research","ror":"https://ror.org/04qq88z54","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210160326","https://openalex.org/I4405256427"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Justus T\u00e4ger","raw_affiliation_strings":["German Center for Diabetes Research (DZD e.V.), M\u00fcnchen-Neuherberg, M\u00fcnchen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"German Center for Diabetes Research (DZD e.V.), M\u00fcnchen-Neuherberg, M\u00fcnchen, Germany","institution_ids":["https://openalex.org/I4210160326"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038987369","display_name":"Annette Sch\u00fcrmann","orcid":"https://orcid.org/0000-0002-4113-4377","observed_orcids":["https://orcid.org/0000-0002-4113-4377"]},"institutions":[{"id":"https://openalex.org/I176453806","display_name":"University of Potsdam","ror":"https://ror.org/03bnmw459","country_code":"DE","type":"education","lineage":["https://openalex.org/I176453806"]},{"id":"https://openalex.org/I4210160326","display_name":"German Center for Diabetes Research","ror":"https://ror.org/04qq88z54","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210160326","https://openalex.org/I4405256427"]},{"id":"https://openalex.org/I4210162705","display_name":"German Institute of Human Nutrition","ror":"https://ror.org/05xdczy51","country_code":"DE","type":"facility","lineage":["https://openalex.org/I315704651","https://openalex.org/I4210162705"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Annette Sch\u00fcrmann","raw_affiliation_strings":["Department of Experimental Diabetology, German Institute of Human Nutrition Potsdam-Rehbruecke, Nuthetal, Germany","German Center for Diabetes Research (DZD e.V.), M\u00fcnchen-Neuherberg, M\u00fcnchen, Germany","Institute of Nutritional Sciences, University of Potsdam, Nuthetal, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Experimental Diabetology, German Institute of Human Nutrition Potsdam-Rehbruecke, Nuthetal, Germany","institution_ids":["https://openalex.org/I4210162705"]},{"raw_affiliation_string":"German Center for Diabetes Research (DZD e.V.), M\u00fcnchen-Neuherberg, M\u00fcnchen, Germany","institution_ids":["https://openalex.org/I4210160326"]},{"raw_affiliation_string":"Institute of Nutritional Sciences, University of Potsdam, Nuthetal, Germany","institution_ids":["https://openalex.org/I176453806"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5133010838","display_name":"Heike Vogel","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210160326","display_name":"German Center for Diabetes Research","ror":"https://ror.org/04qq88z54","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210160326","https://openalex.org/I4405256427"]},{"id":"https://openalex.org/I4210162705","display_name":"German Institute of Human Nutrition","ror":"https://ror.org/05xdczy51","country_code":"DE","type":"facility","lineage":["https://openalex.org/I315704651","https://openalex.org/I4210162705"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Heike Vogel","raw_affiliation_strings":["Department of Experimental Diabetology, German Institute of Human Nutrition Potsdam-Rehbruecke, Nuthetal, Germany","German Center for Diabetes Research (DZD e.V.), M\u00fcnchen-Neuherberg, M\u00fcnchen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Experimental Diabetology, German Institute of Human Nutrition Potsdam-Rehbruecke, Nuthetal, Germany","institution_ids":["https://openalex.org/I4210162705"]},{"raw_affiliation_string":"German Center for Diabetes Research (DZD e.V.), M\u00fcnchen-Neuherberg, M\u00fcnchen, Germany","institution_ids":["https://openalex.org/I4210160326"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5095774023"],"corresponding_institution_ids":["https://openalex.org/I4210160326","https://openalex.org/I4210162705"],"apc_list":{"value":2700,"currency":"USD","value_usd":2700},"apc_paid":{"value":2700,"currency":"USD","value_usd":2700},"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.60348417,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"47","issue":null,"first_page":"102723","last_page":"102723"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pathway-enrichment-analysis","display_name":"pathway enrichment","score":0.7269999980926514},{"id":"https://openalex.org/keywords/multi-omics-integration","display_name":"multi-omics integration","score":0.9309999942779541},{"id":"https://openalex.org/keywords/pathway-visualization","display_name":"pathway visualization","score":0.9399999976158142},{"id":"https://openalex.org/keywords/gene-expression-changes","display_name":"gene expression changes","score":0.8040000200271606},{"id":"https://openalex.org/keywords/epigenetic-information","display_name":"epigenetic information","score":0.7630000114440918},{"id":"https://openalex.org/keywords/dna-methylation","display_name":"DNA methylation","score":0.9259999990463257},{"id":"https://openalex.org/keywords/regulatory-interactions","display_name":"regulatory interactions","score":0.7139999866485596},{"id":"https://openalex.org/keywords/metabolomics","display_name":"metabolomics","score":0.8119999766349792},{"id":"https://openalex.org/keywords/web-application","display_name":"web application","score":0.4690000116825104},{"id":"https://openalex.org/keywords/python","display_name":"Python","score":0.6340000033378601}],"concepts":[{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.7109000086784363},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6991999745368958},{"id":"https://openalex.org/C101468663","wikidata":"https://www.wikidata.org/wiki/Q1620158","display_name":"Modular design","level":2,"score":0.6601999998092651},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6184999942779541},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.5716000199317932},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.5324000120162964},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5019000172615051},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.37529999017715454},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3741999864578247},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.34549999237060547},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.33649998903274536},{"id":"https://openalex.org/C123657996","wikidata":"https://www.wikidata.org/wiki/Q12271","display_name":"Architecture","level":2,"score":0.33399999141693115},{"id":"https://openalex.org/C2984074130","wikidata":"https://www.wikidata.org/wiki/Q73539779","display_name":"R package","level":2,"score":0.32580000162124634},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.32440000772476196},{"id":"https://openalex.org/C118524514","wikidata":"https://www.wikidata.org/wiki/Q173212","display_name":"Computer architecture","level":1,"score":0.32120001316070557},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.3084000051021576},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.30559998750686646},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.30469998717308044},{"id":"https://openalex.org/C35869016","wikidata":"https://www.wikidata.org/wiki/Q846636","display_name":"Software architecture","level":3,"score":0.3025999963283539},{"id":"https://openalex.org/C187191949","wikidata":"https://www.wikidata.org/wiki/Q1138496","display_name":"Profiling (computer programming)","level":2,"score":0.29600000381469727},{"id":"https://openalex.org/C175309249","wikidata":"https://www.wikidata.org/wiki/Q725864","display_name":"Pipeline transport","level":2,"score":0.2840999960899353},{"id":"https://openalex.org/C149635348","wikidata":"https://www.wikidata.org/wiki/Q193040","display_name":"Embedded system","level":1,"score":0.28040000796318054},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.275299996137619},{"id":"https://openalex.org/C41091548","wikidata":"https://www.wikidata.org/wiki/Q26939","display_name":"Epigenetics","level":3,"score":0.2750999927520752},{"id":"https://openalex.org/C79158427","wikidata":"https://www.wikidata.org/wiki/Q485396","display_name":"Analytics","level":2,"score":0.27309998869895935},{"id":"https://openalex.org/C90559484","wikidata":"https://www.wikidata.org/wiki/Q778379","display_name":"Expression (computer science)","level":2,"score":0.26440000534057617},{"id":"https://openalex.org/C116409475","wikidata":"https://www.wikidata.org/wiki/Q1385056","display_name":"External Data Representation","level":2,"score":0.25619998574256897},{"id":"https://openalex.org/C77660652","wikidata":"https://www.wikidata.org/wiki/Q150971","display_name":"Computer graphics","level":2,"score":0.25600001215934753},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.25540000200271606},{"id":"https://openalex.org/C76518257","wikidata":"https://www.wikidata.org/wiki/Q271680","display_name":"Software framework","level":5,"score":0.2517000138759613}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1016/j.bbrep.2026.102723","doi":"https://doi.org/10.1016/j.bbrep.2026.102723","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.bbrep.2026.102723","pdf_url":null,"source":{"id":"https://openalex.org/S2764640729","display_name":"Biochemistry and Biophysics Reports","issn_l":"2405-5808","issn":["2405-5808"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-d","jufo-1","ki-jl-1","norway-1","poland-40"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Biochemistry and Biophysics Reports","raw_type":"journal-article"},{"id":"pmid:42698931","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/42698931","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Biochemistry and biophysics reports","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:13543111","doi":null,"is_oa":true,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/42698931/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Biochem Biophys Rep","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1016/j.bbrep.2026.102723","doi":"https://doi.org/10.1016/j.bbrep.2026.102723","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.bbrep.2026.102723","pdf_url":null,"source":{"id":"https://openalex.org/S2764640729","display_name":"Biochemistry and Biophysics Reports","issn_l":"2405-5808","issn":["2405-5808"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-d","jufo-1","ki-jl-1","norway-1","poland-40"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Biochemistry and Biophysics Reports","raw_type":"journal-article"},"sustainable_development_goals":[],"sustainable_development_goals_aurora":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G1691319351","display_name":null,"funder_award_id":"82DZD03I04","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"},{"id":"https://openalex.org/G3354324101","display_name":null,"funder_award_id":"82DZD00302","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"},{"id":"https://openalex.org/G943618753","display_name":null,"funder_award_id":"82DZD03D03 -","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"}],"funders":[{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"},{"id":"https://openalex.org/F4320322744","display_name":"Brandenburger Staatsministerium f\u00fcr Wissenschaft, Forschung und Kultur","ror":"https://ror.org/02vcjcj30"},{"id":"https://openalex.org/F4320334322","display_name":"HORIZON EUROPE Framework Programme","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":52,"referenced_works":["https://openalex.org/W1990799285","https://openalex.org/W1995434974","https://openalex.org/W2001100563","https://openalex.org/W2002260514","https://openalex.org/W2017199818","https://openalex.org/W2027319259","https://openalex.org/W2042789810","https://openalex.org/W2053835153","https://openalex.org/W2084802447","https://openalex.org/W2087783404","https://openalex.org/W2097795961","https://openalex.org/W2100625056","https://openalex.org/W2103017472","https://openalex.org/W2106248311","https://openalex.org/W2114850508","https://openalex.org/W2115964911","https://openalex.org/W2133465414","https://openalex.org/W2134118500","https://openalex.org/W2141224543","https://openalex.org/W2146737319","https://openalex.org/W2158217645","https://openalex.org/W2159675211","https://openalex.org/W2163137121","https://openalex.org/W2197399058","https://openalex.org/W2222000795","https://openalex.org/W2739492614","https://openalex.org/W2790449849","https://openalex.org/W2808845633","https://openalex.org/W2893229687","https://openalex.org/W2969718750","https://openalex.org/W2991372538","https://openalex.org/W3049485244","https://openalex.org/W3093858607","https://openalex.org/W4220831425","https://openalex.org/W4224257212","https://openalex.org/W4249273120","https://openalex.org/W4285097559","https://openalex.org/W4294216483","https://openalex.org/W4307425304","https://openalex.org/W4387691875","https://openalex.org/W4390975753","https://openalex.org/W4391017353","https://openalex.org/W4394614136","https://openalex.org/W4401895932","https://openalex.org/W4407933732","https://openalex.org/W4409540499","https://openalex.org/W4410293457","https://openalex.org/W4413854877","https://openalex.org/W4415671632","https://openalex.org/W4415862440","https://openalex.org/W4416453988","https://openalex.org/W4417143362"],"related_works":[],"abstract_inverted_index":{"metaKEGG":[0,37,55,134],"is":[1],"a":[2,73,82,122],"comprehensive":[3],"software":[4],"package":[5],"designed":[6],"to":[7,76,93,105,132],"streamline":[8],"the":[9,26,106],"visualization":[10],"and":[11,22,31,59,67,119],"integration":[12,107],"of":[13,46,108],"pathway":[14,84],"enrichment":[15],"results":[16],"from":[17,98],"multi-omics":[18],"data,":[19],"providing":[20],"accessible":[21],"detailed":[23],"insights":[24],"into":[25],"molecular":[27],"mechanisms":[28],"driving":[29],"health":[30],"disease.":[32],"Unlike":[33],"standard":[34],"pipeline":[35],"approaches,":[36],"incorporates":[38],"novel":[39],"concepts":[40],"allowing":[41],"for":[42],"clear,":[43],"granular":[44],"representation":[45],"gene-level":[47],"or":[48],"transcript-level":[49],"expression":[50,101],"changes.":[51],"Beyond":[52],"transcriptomic":[53],"analysis,":[54],"also":[56],"supports":[57],"epigenetic":[58],"regulatory":[60,79],"metadata":[61],"layers,":[62],"such":[63],"as":[64],"methylation":[65],"profiles":[66],"miRNA":[68],"target":[69],"annotations,":[70],"offering":[71],"users":[72],"versatile":[74],"solution":[75],"depict":[77],"complex":[78],"interactions":[80],"within":[81],"single":[83],"map.":[85],"Its":[86,112],"modular":[87],"architecture":[88],"provides":[89],"nine":[90],"analysis":[91],"pipelines":[92],"suit":[94],"various":[95],"experimental":[96],"designs,":[97],"comparing":[99],"gene":[100],"across":[102],"multiple":[103],"conditions":[104],"compound-based":[109],"metabolomics":[110],"data.":[111],"implementation":[113],"in":[114],"Python":[115],"ensures":[116],"easy":[117],"adoption":[118],"reproducibility,":[120],"while":[121],"user-friendly":[123],"web":[124],"app":[125],"allows":[126],"researchers":[127],"with":[128],"limited":[129],"bioinformatics":[130],"expertise":[131],"harness":[133],"'s":[135],"full":[136],"potential.":[137]},"counts_by_year":[],"updated_date":"2026-10-08T09:06:37.294493","created_date":"2026-08-26T00:00:00"}