{"id":"https://openalex.org/W7204121187","doi":"https://doi.org/10.3389/fmicb.2026.1909810","title":"Genomic insights into Aeromonas infections in diarrheal patients: high diversity, emerging resistance, and potential outbreak in Beijing","display_name":"Genomic insights into Aeromonas infections in diarrheal patients: high diversity, emerging resistance, and potential outbreak in Beijing","publication_year":2026,"publication_date":"2026-08-24","ids":{"openalex":"https://openalex.org/W7204121187","doi":"https://doi.org/10.3389/fmicb.2026.1909810","pmid":"https://pubmed.ncbi.nlm.nih.gov/42707199","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/13547312"},"language":"en","primary_location":{"id":"doi:10.3389/fmicb.2026.1909810","doi":"https://doi.org/10.3389/fmicb.2026.1909810","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fmicb.2026.1909810","pdf_url":"https://www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2026.1909810/pdf","source":{"id":"https://openalex.org/S2484704948","display_name":"Frontiers in Microbiology","issn_l":"1664-302X","issn":["1664-302X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","jufo-1","ki-jl-1","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Microbiology","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2026.1909810/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5159837491","display_name":"Aixia Yan","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Aixia Yan","raw_affiliation_strings":["Shunyi District Center for Disease Control and Prevention"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shunyi District Center for Disease Control and Prevention","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5147911093","display_name":"Yuwei Liu","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yuwei Liu","raw_affiliation_strings":["Shunyi District Center for Disease Control and Prevention"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shunyi District Center for Disease Control and Prevention","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5147988098","display_name":"Shoufei Li","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Shoufei Li","raw_affiliation_strings":["Shunyi District Center for Disease Control and Prevention"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shunyi District Center for Disease Control and Prevention","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5147942301","display_name":"Xinmiao Wu","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Xinmiao Wu","raw_affiliation_strings":["Shunyi District Center for Disease Control and Prevention"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shunyi District Center for Disease Control and Prevention","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5147972869","display_name":"Jie Yang","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jie Yang","raw_affiliation_strings":["Shunyi District Center for Disease Control and Prevention"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shunyi District Center for Disease Control and Prevention","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5148008024","display_name":"Yameng Gao","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yameng Gao","raw_affiliation_strings":["Shunyi District Center for Disease Control and Prevention"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shunyi District Center for Disease Control and Prevention","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5147955884","display_name":"Yu Zhao","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yu Zhao","raw_affiliation_strings":["Shunyi District Center for Disease Control and Prevention"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shunyi District Center for Disease Control and Prevention","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073645680","display_name":"Luotong Wang","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Luotong Wang","raw_affiliation_strings":["Shunyi District Center for Disease Control and Prevention"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shunyi District Center for Disease Control and Prevention","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5123702588","display_name":"Bo Pang","orcid":"https://orcid.org/0000-0001-5330-4647","observed_orcids":["https://orcid.org/0000-0001-5330-4647"]},"institutions":[{"id":"https://openalex.org/I184490438","display_name":"Chinese Center For Disease Control and Prevention","ror":"https://ror.org/04wktzw65","country_code":"CN","type":"government","lineage":["https://openalex.org/I184490438","https://openalex.org/I4210127390","https://openalex.org/I4210151987"]},{"id":"https://openalex.org/I4210146685","display_name":"National Institute for Communicable Disease Control and Prevention","ror":"https://ror.org/04f7g6845","country_code":"CN","type":"government","lineage":["https://openalex.org/I184490438","https://openalex.org/I4210127390","https://openalex.org/I4210146685","https://openalex.org/I4210151987"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Bo Pang","raw_affiliation_strings":["National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention","institution_ids":["https://openalex.org/I184490438","https://openalex.org/I4210146685"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5148036504","display_name":"Ying Li","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Ying Li","raw_affiliation_strings":["Shunyi District Center for Disease Control and Prevention"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shunyi District Center for Disease Control and Prevention","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5123702588","https://openalex.org/A5148036504"],"corresponding_institution_ids":["https://openalex.org/I184490438","https://openalex.org/I4210146685"],"apc_list":{"value":3150,"currency":"CHF","value_usd":3801},"apc_paid":{"value":3150,"currency":"CHF","value_usd":3801},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.54709677,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"17","issue":null,"first_page":"1909810","last_page":"1909810"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10147","display_name":"Antibiotic Resistance in Bacteria","score":0.586899995803833,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10147","display_name":"Antibiotic Resistance in Bacteria","score":0.586899995803833,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10486","display_name":"Salmonella and Campylobacter epidemiology","score":0.2125999927520752,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12824","display_name":"Infections and bacterial resistance","score":0.10220000147819519,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/aeromonas","display_name":"Aeromonas","score":0.9810000061988831},{"id":"https://openalex.org/keywords/aeromonas-veronii","display_name":"Aeromonas veronii","score":0.9399999976158142},{"id":"https://openalex.org/keywords/aeromonas-caviae","display_name":"Aeromonas caviae","score":1.0},{"id":"https://openalex.org/keywords/aeromonas-dhakensis","display_name":"Aeromonas dhakensis","score":0.8379999995231628},{"id":"https://openalex.org/keywords/aeromonas-enteropelogenes","display_name":"Aeromonas enteropelogenes","score":0.9700000286102295},{"id":"https://openalex.org/keywords/colistin-resistance","display_name":"colistin resistance","score":0.7749999761581421},{"id":"https://openalex.org/keywords/multidrug-resistance","display_name":"multidrug resistance","score":0.7900000214576721},{"id":"https://openalex.org/keywords/antimicrobial-resistance-genes","display_name":"antimicrobial resistance genes","score":0.8450000286102295},{"id":"https://openalex.org/keywords/virulence-genes","display_name":"virulence genes","score":0.9240000247955322},{"id":"https://openalex.org/keywords/type-iii-secretion-system","display_name":"type III secretion system","score":0.7730000019073486},{"id":"https://openalex.org/keywords/type-vi-secretion-system","display_name":"type VI secretion system","score":0.9670000076293945},{"id":"https://openalex.org/keywords/rtx-toxins","display_name":"RTX toxins","score":0.8460000157356262},{"id":"https://openalex.org/keywords/coinfection","display_name":"co-infection","score":0.5559999942779541},{"id":"https://openalex.org/keywords/disease-outbreaks","display_name":"outbreak","score":0.3529999852180481},{"id":"https://openalex.org/keywords/beijing","display_name":"Beijing","score":0.35899999737739563}],"concepts":[{"id":"https://openalex.org/C2780313371","wikidata":"https://www.wikidata.org/wiki/Q137647","display_name":"Aeromonas","level":3,"score":0.8252000212669373},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8181999921798706},{"id":"https://openalex.org/C2780915542","wikidata":"https://www.wikidata.org/wiki/Q4688339","display_name":"Aeromonas veronii","level":4,"score":0.7146000266075134},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.66839998960495},{"id":"https://openalex.org/C2777935563","wikidata":"https://www.wikidata.org/wiki/Q16825697","display_name":"Aeromonas caviae","level":4,"score":0.6158000230789185},{"id":"https://openalex.org/C77434933","wikidata":"https://www.wikidata.org/wiki/Q4043440","display_name":"Multilocus sequence typing","level":4,"score":0.5285000205039978},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.48260000348091125},{"id":"https://openalex.org/C94665300","wikidata":"https://www.wikidata.org/wiki/Q63391344","display_name":"Antibiotic resistance","level":3,"score":0.47279998660087585},{"id":"https://openalex.org/C2775876089","wikidata":"https://www.wikidata.org/wiki/Q281082","display_name":"Nalidixic acid","level":4,"score":0.47279998660087585},{"id":"https://openalex.org/C60987743","wikidata":"https://www.wikidata.org/wiki/Q1460232","display_name":"Virulence","level":3,"score":0.4657999873161316},{"id":"https://openalex.org/C2779910956","wikidata":"https://www.wikidata.org/wiki/Q131488","display_name":"Campylobacter","level":3,"score":0.4474000036716461},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.4117000102996826},{"id":"https://openalex.org/C2776986154","wikidata":"https://www.wikidata.org/wiki/Q131029","display_name":"Shigella","level":4,"score":0.41119998693466187},{"id":"https://openalex.org/C2781065037","wikidata":"https://www.wikidata.org/wiki/Q150839","display_name":"Salmonella","level":3,"score":0.3817000091075897},{"id":"https://openalex.org/C2779259085","wikidata":"https://www.wikidata.org/wiki/Q418946","display_name":"Colistin","level":3,"score":0.3709000051021576},{"id":"https://openalex.org/C132533263","wikidata":"https://www.wikidata.org/wiki/Q2347362","display_name":"Mobile genetic elements","level":4,"score":0.37049999833106995},{"id":"https://openalex.org/C2781209916","wikidata":"https://www.wikidata.org/wiki/Q3215756","display_name":"Typing","level":2,"score":0.35409998893737793},{"id":"https://openalex.org/C2776666601","wikidata":"https://www.wikidata.org/wiki/Q3457855","display_name":"Resistome","level":5,"score":0.34459999203681946},{"id":"https://openalex.org/C28245876","wikidata":"https://www.wikidata.org/wiki/Q2396681","display_name":"Multiple Loci VNTR Analysis","level":5,"score":0.3416000008583069},{"id":"https://openalex.org/C2780258820","wikidata":"https://www.wikidata.org/wiki/Q5195454","display_name":"Genomic island","level":4,"score":0.3400000035762787},{"id":"https://openalex.org/C116675565","wikidata":"https://www.wikidata.org/wiki/Q3241045","display_name":"Outbreak","level":2,"score":0.33009999990463257},{"id":"https://openalex.org/C133936738","wikidata":"https://www.wikidata.org/wiki/Q643839","display_name":"Multiple drug resistance","level":3,"score":0.3192000091075897},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.30469998717308044},{"id":"https://openalex.org/C22744801","wikidata":"https://www.wikidata.org/wiki/Q172778","display_name":"Plasmid","level":3,"score":0.2858999967575073},{"id":"https://openalex.org/C2780722889","wikidata":"https://www.wikidata.org/wiki/Q12090","display_name":"Cholera","level":2,"score":0.27140000462532043},{"id":"https://openalex.org/C97669555","wikidata":"https://www.wikidata.org/wiki/Q4118435","display_name":"Molecular epidemiology","level":4,"score":0.2711000144481659},{"id":"https://openalex.org/C114851261","wikidata":"https://www.wikidata.org/wiki/Q12147416","display_name":"Drug resistance","level":2,"score":0.2702000141143799},{"id":"https://openalex.org/C2776422119","wikidata":"https://www.wikidata.org/wiki/Q910922","display_name":"Vibrionaceae","level":3,"score":0.26899999380111694},{"id":"https://openalex.org/C2777368272","wikidata":"https://www.wikidata.org/wiki/Q418073","display_name":"Ribotyping","level":4,"score":0.2615000009536743},{"id":"https://openalex.org/C4937899","wikidata":"https://www.wikidata.org/wiki/Q68541106","display_name":"Antimicrobial","level":2,"score":0.26109999418258667},{"id":"https://openalex.org/C2778368673","wikidata":"https://www.wikidata.org/wiki/Q553220","display_name":"Ertapenem","level":5,"score":0.2524000108242035}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.3389/fmicb.2026.1909810","doi":"https://doi.org/10.3389/fmicb.2026.1909810","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fmicb.2026.1909810","pdf_url":"https://www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2026.1909810/pdf","source":{"id":"https://openalex.org/S2484704948","display_name":"Frontiers in Microbiology","issn_l":"1664-302X","issn":["1664-302X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","jufo-1","ki-jl-1","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Microbiology","raw_type":"journal-article"},{"id":"pmh:oai:pubmedcentral.nih.gov:13547312","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC13547312/","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC13547312/pdf/fmicb-17-1909810.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Front Microbiol","raw_type":"Text"},{"id":"pmid:42707199","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/42707199","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in microbiology","raw_type":"Journal Article"},{"id":"pmh:oai:doaj.org/article:3cb42549f83341da8eea4e0f81700a1f","doi":null,"is_oa":false,"landing_page_url":"https://doaj.org/article/3cb42549f83341da8eea4e0f81700a1f","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Microbiology, Vol 17 (2026)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.3389/fmicb.2026.1909810","doi":"https://doi.org/10.3389/fmicb.2026.1909810","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fmicb.2026.1909810","pdf_url":"https://www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2026.1909810/pdf","source":{"id":"https://openalex.org/S2484704948","display_name":"Frontiers in Microbiology","issn_l":"1664-302X","issn":["1664-302X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","jufo-1","ki-jl-1","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Microbiology","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.9940000176429749}],"study_designs":[{"id":"https://openalex.org/study-designs/observational-study","display_name":"Observational Study"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W7204121187.pdf","grobid_xml":"https://content.openalex.org/works/W7204121187.grobid-xml"},"referenced_works_count":22,"referenced_works":["https://openalex.org/W1977554395","https://openalex.org/W2052558548","https://openalex.org/W2056857102","https://openalex.org/W2085632671","https://openalex.org/W2107231437","https://openalex.org/W2129392320","https://openalex.org/W2146316143","https://openalex.org/W2179036997","https://openalex.org/W2404874210","https://openalex.org/W2810189862","https://openalex.org/W3106900692","https://openalex.org/W4386512155","https://openalex.org/W4386967611","https://openalex.org/W4395678076","https://openalex.org/W4399176197","https://openalex.org/W4401522591","https://openalex.org/W4404549303","https://openalex.org/W4406781516","https://openalex.org/W4410208003","https://openalex.org/W4412933410","https://openalex.org/W4416228433","https://openalex.org/W7126398173"],"related_works":["https://openalex.org/W4406781516","https://openalex.org/W2094477491","https://openalex.org/W7169800482","https://openalex.org/W7126398173","https://openalex.org/W4398248308","https://openalex.org/W4404549303","https://openalex.org/W7222195882","https://openalex.org/W4410657804","https://openalex.org/W7214073242","https://openalex.org/W3106900692"],"abstract_inverted_index":{"Background":[0],"Aeromonas":[1,39,107,116,121,234,311,353],"species":[2,310],"are":[3],"ubiquitous":[4],"aquatic":[5],"bacteria":[6],"that":[7,299,314],"have":[8],"emerged":[9],"as":[10,186],"significant":[11],"foodborne":[12,382],"enteric":[13,129],"pathogens":[14,130],"worldwide,":[15],"yet":[16],"their":[17],"genomic":[18,214,305],"landscape":[19],"in":[20,27,45,110,132,193,238,358],"clinical":[21,317,324,370],"settings":[22],"remains":[23],"poorly":[24],"delineated,":[25],"particularly":[26],"Beijing.":[28,359],"Methods":[29],"To":[30],"address":[31],"this":[32,338],"gap,":[33],"we":[34],"performed":[35],"active":[36],"surveillance":[37,377],"for":[38,142,378],"among":[40,352],"691":[41],"consecutive":[42],"diarrheal":[43,356],"outpatients":[44],"a":[46,242,255,277,291,296,363,368],"Beijing":[47,316],"district":[48],"from":[49,321,355],"January":[50],"to":[51,180,209],"December":[52],"2024.":[53],"Isolates":[54],"were":[55,139,155,191,236,272],"recovered":[56,289],"using":[57],"enrichment":[58],"culture":[59],"coupled":[60],"with":[61,115,127,161,200],"PCR":[62],"screening":[63],"and":[64,94,101,120,148,151,167,175,233,241,254,348,367,380],"identified":[65,192,276],"by":[66,328],"MALDI-TOF":[67],"MS.":[68],"Antimicrobial":[69],"susceptibility":[70],"was":[71,78,108,159],"tested":[72],"against":[73],"17":[74],"agents.":[75],"Whole-genome":[76],"sequencing":[77],"conducted":[79],"on":[80],"all":[81],"isolates,":[82,196],"enabling":[83],"average":[84],"nucleotide":[85],"identity":[86],"(ANI)":[87],"analysis,":[88],"comprehensive":[89],"annotation":[90],"of":[91,113,134,153,195,216,270,281,295,307,362,375],"antimicrobial":[92],"resistance":[93,189],"virulence":[95,350],"genes,":[96,240],"multilocus":[97],"sequence":[98,267],"typing":[99],"(MLST),":[100],"core-genome":[102],"SNP":[103,287],"(cgSNP)-based":[104],"phylogenetics.":[105],"Results":[106],"detected":[109],"3.3%":[111],"(23/691)":[112],"patients,":[114],"veronii":[117,224,284],"(56.52%,":[118],"13/23)":[119],"caviae":[122,232],"(26.09%,":[123],"6/23)":[124],"predominating.":[125],"Co-infections":[126],"other":[128],"occurred":[131],"65.2%":[133],"positive":[135],"cases.":[136],"Resistance":[137],"rates":[138],"notably":[140],"high":[141,341],"ampicillin/ampicillin-sulbactam":[143],"(78.26%),":[144],"nalidixic":[145],"acid":[146],"(56.52%),":[147],"ertapenem":[149],"(21.73%),":[150],"65.21%":[152],"isolates":[154,264,285,354],"multidrug-resistant.":[156],"Genotypic\u2013phenotypic":[157],"concordance":[158],"robust,":[160],"\u03b2":[162],"-lactamase":[163],"genes":[164,208,218],"ampS":[165],"(60.87%)":[166],"blaCEPH-A3":[168],"(47.83%)":[169],"being":[170],"most":[171],"prevalent.":[172],"Strikingly,":[173],"mcr-3.25":[174],"mcr-3.3":[176],",":[177],"which":[178,271],"belong":[179],"the":[181,262,308,315,322,373],"mcr":[182,207],"family":[183],"(originally":[184],"described":[185],"mobile":[187],"colistin":[188,346],"genes),":[190],"8.70%":[194],"exhibiting":[197],"perfect":[198],"correlation":[199],"phenotypic":[201],"resistance.":[202],"Plasmer":[203],"analysis":[204,215,306],"suggested":[205],"both":[206],"be":[210],"chromosomally":[211],"encoded.":[212],"Comparative":[213,304],"virulence-associated":[217],"revealed":[219],"striking":[220],"species-specific":[221,349],"specialization:":[222],"A.":[223,231,244,283],"predominantly":[225],"carried":[226],"complete":[227],"T3SS":[228],"clusters":[229],"(61.5%),":[230],"enteropelogenes":[235],"enriched":[237],"T6SS":[239],"single":[243],"dhakensis":[245],"isolate":[246,318,371],"possessed":[247],"an":[248],"extensive":[249],"arsenal":[250],"including":[251],"T3SS,":[252],"T6SS,":[253],"full":[256],"RTX":[257],"toxin":[258],"cluster.":[259],"MLST":[260],"resolved":[261],"23":[263],"into":[265],"22":[266],"types,":[268],"18":[269],"novel.":[273],"Phylogenetic":[274],"reconstruction":[275],"tight":[278],"monophyletic":[279],"cluster":[280,298,366],"three":[282],"(9\u201327":[286],"differences)":[288],"within":[290],"96-h":[292],"window,":[293],"suggestive":[294],"potential":[297,364],"warrants":[300],"further":[301],"epidemiological":[302],"investigation.":[303],"rare":[309,369],"allosaccharophila":[312],"demonstrated":[313],"S14":[319],"differs":[320],"U.S.":[323],"strain":[325],"ATCC":[326],"35942":[327],"42,099":[329],"SNPs,":[330],"confirming":[331],"its":[332],"distinct":[333],"genetic":[334,342],"lineage.":[335],"Conclusion":[336],"Collectively,":[337],"study":[339],"delineates":[340],"diversity,":[343],"emerging":[344],"chromosomal":[345],"resistance,":[347],"specialization":[351],"patients":[357],"The":[360],"detection":[361],"outbreak":[365],"underscores":[372],"power":[374],"genomics-based":[376],"detecting":[379],"mitigating":[381],"pathogen":[383],"thre":[384],"ats":[385],".":[386]},"counts_by_year":[],"updated_date":"2026-10-29T09:56:32.521200","created_date":"2026-08-25T00:00:00"}
