{"id":"https://openalex.org/W7204076996","doi":"https://doi.org/10.6084/m9.figshare.33320163","title":"Related files for \u201cGenomic Origin Tracing of SARS-CoV-2: Lessons from Taiwan\u2019s Third Outbreak and Its Cryptic Transmission\u201d","display_name":"Related files for \u201cGenomic Origin Tracing of SARS-CoV-2: Lessons from Taiwan\u2019s Third Outbreak and Its Cryptic Transmission\u201d","publication_year":2026,"publication_date":"2026-08-24","ids":{"openalex":"https://openalex.org/W7204076996","doi":"https://doi.org/10.6084/m9.figshare.33320163"},"language":null,"primary_location":{"id":"doi:10.6084/m9.figshare.33320163","doi":"https://doi.org/10.6084/m9.figshare.33320163","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.33320163","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},"volume":null,"type":"dataset","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.6084/m9.figshare.33320163","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053523433","display_name":"Jui\u2010Hung Tai","orcid":"https://orcid.org/0000-0003-4283-3118","observed_orcids":["https://orcid.org/0000-0003-4283-3118"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jui-Hung Tai","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052724908","display_name":"Yu Ken Low","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yu Ken Low","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069024807","display_name":"Selina Cai-Ling Wang","orcid":"https://orcid.org/0009-0003-6217-9608","observed_orcids":["https://orcid.org/0009-0003-6217-9608"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Selina Cai-Ling Wang","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068053666","display_name":"Tzi\u2010Yuan Wang","orcid":"https://orcid.org/0000-0002-1562-0144","observed_orcids":["https://orcid.org/0000-0002-1562-0144"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tzi\u2010Yuan Wang","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5147944160","display_name":"Jann-Tay Wang","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jann-Tay Wang","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5147953801","display_name":"Yu-Shu Liu","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yu-Shu Liu","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084064111","display_name":"Charles S. P. Foster","orcid":"https://orcid.org/0000-0002-6700-3746","observed_orcids":["https://orcid.org/0000-0002-6700-3746"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Charles S.P. Foster","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063456676","display_name":"Sebastiaan J. van Hal","orcid":"https://orcid.org/0000-0001-5852-4155","observed_orcids":["https://orcid.org/0000-0001-5852-4155"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sebastiaan J Van Hal","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5147954950","display_name":"Ya-Yun Lai","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ya-Yun Lai","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5136311561","display_name":"Shiou-Hwei Yeh","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Shiou-Hwei Yeh","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025368461","display_name":"Sui\u2010Yuan Chang","orcid":"https://orcid.org/0000-0002-6009-6724","observed_orcids":["https://orcid.org/0000-0002-6009-6724"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sui-yuan Chang","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5010425480","display_name":"Hurng\u2010Yi Wang","orcid":"https://orcid.org/0000-0003-1708-8734","observed_orcids":["https://orcid.org/0000-0003-1708-8734"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hurng-Yi Wang","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0003-1708-8734","affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.9810000061988831,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.9810000061988831,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10410","display_name":"COVID-19 epidemiological studies","score":0.006500000134110451,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11754","display_name":"SARS-CoV-2 detection and testing","score":0.0032999999821186066,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sars-cov-2","display_name":"SARS-CoV-2","score":1.0},{"id":"https://openalex.org/keywords/cryptic-transmission","display_name":"cryptic transmission","score":0.8299999833106995},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"phylogenetic tree","score":0.640999972820282},{"id":"https://openalex.org/keywords/time-to-the-most-recent-common-ancestor","display_name":"time to most recent common ancestor","score":0.8009999990463257},{"id":"https://openalex.org/keywords/sars-cov-2-transmission","display_name":"SARS-CoV-2 transmission","score":0.5770000219345093}],"concepts":[{"id":"https://openalex.org/C138673069","wikidata":"https://www.wikidata.org/wiki/Q322229","display_name":"Tracing","level":2,"score":0.5313000082969666},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.49230000376701355},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.438400000333786},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.4381999969482422},{"id":"https://openalex.org/C116675565","wikidata":"https://www.wikidata.org/wiki/Q3241045","display_name":"Outbreak","level":2,"score":0.41100001335144043},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.38519999384880066},{"id":"https://openalex.org/C8797682","wikidata":"https://www.wikidata.org/wiki/Q2115","display_name":"XML","level":2,"score":0.36489999294281006},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.3598000109195709},{"id":"https://openalex.org/C171730128","wikidata":"https://www.wikidata.org/wiki/Q5227290","display_name":"Data file","level":2,"score":0.35510000586509705},{"id":"https://openalex.org/C97250363","wikidata":"https://www.wikidata.org/wiki/Q235557","display_name":"File format","level":2,"score":0.3043000102043152},{"id":"https://openalex.org/C53553401","wikidata":"https://www.wikidata.org/wiki/Q47307","display_name":"Genealogy","level":1,"score":0.298799991607666},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.2888999879360199},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.26489999890327454},{"id":"https://openalex.org/C58640448","wikidata":"https://www.wikidata.org/wiki/Q42515","display_name":"Cartography","level":1,"score":0.26330000162124634},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2535000145435333}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.6084/m9.figshare.33320163","doi":"https://doi.org/10.6084/m9.figshare.33320163","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.33320163","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.33320163.v1","doi":"https://doi.org/10.6084/m9.figshare.33320163.v1","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.33320163.v1","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.33320163.v2","doi":"https://doi.org/10.6084/m9.figshare.33320163.v2","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.33320163.v2","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"doi:10.6084/m9.figshare.33320163","doi":"https://doi.org/10.6084/m9.figshare.33320163","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.33320163","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},"sustainable_development_goals":[],"sustainable_development_goals_aurora":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"Files":[0],"related":[1],"to":[2],"\"Genomic":[3],"Origin":[4],"Tracing":[5],"of":[6,52,57,86,100],"SARS-CoV-2:":[7],"Lessons":[8],"from":[9,76,96],"Taiwan\u2019s":[10],"Third":[11],"Outbreak":[12],"and":[13,25,28,35,68,90],"Its":[14],"Cryptic":[15],"Transmission\".":[16],"These":[17],"files":[18,31,75],"include":[19],"the":[20,77,97],"sequence":[21],"alignment,":[22],"TMRCA":[23,65,78,84,98],"XML":[24],"log":[26,74],"files,":[27],"phylogenetic":[29],"tree":[30,51,56],"for":[32,46,64,83],"Figure":[33,37,47,53,59],"1":[34],"Supplementary":[36,58],"3":[38,60],"in":[39],"Newick":[40],"format.":[41],"[all_Taiwan_alpha_sort.fas]:":[42],"Alignment":[43],"fasta":[44],"file":[45,63,82,95],"S3.":[48],"[Figure_1_tree.nwk]:":[49],"Phylogenetic":[50,55],"1[Figure_S3_tree.nwk]:":[54],"[beast_TIII_TMRCA_100m.xml]:":[61],"xml":[62,81],"analysis":[66,85,99],"(beauti":[67,89],"beast":[69,91],"v2.7.5)":[70,92],"[beast_TIII_TMRCA_100m.run1-3.log]:":[71],"Three":[72],"independent":[73],"analysis.":[79],"[beast_TIII_TMRCA_downSampling_100m.xml]:":[80],"downsampling":[87,101],"dataset":[88],"[beast_TIII_TMRCA_downSampling_100m.log]:":[93],"Log":[94],"dataset.":[102]},"counts_by_year":[],"updated_date":"2026-10-12T09:40:04.860316","created_date":"2026-08-25T00:00:00"}
