{"id":"https://openalex.org/W7166192302","doi":"https://doi.org/10.6084/m9.figshare.32801267","title":"Assembly and sequence analysis of the chloroplast genome of Amorphophallus atroviridis Hett 1994","display_name":"Assembly and sequence analysis of the chloroplast genome of Amorphophallus atroviridis Hett 1994","publication_year":2026,"publication_date":"2026-06-26","ids":{"openalex":"https://openalex.org/W7166192302","doi":"https://doi.org/10.6084/m9.figshare.32801267"},"language":"en","primary_location":{"id":"doi:10.6084/m9.figshare.32801267","doi":"https://doi.org/10.6084/m9.figshare.32801267","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.32801267","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},"volume":null,"type":"dataset","is_traditional":false,"indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.6084/m9.figshare.32801267","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5138112607","display_name":"Haoliang Shi","orcid":"https://orcid.org/0009-0007-4452-0162","observed_orcids":["https://orcid.org/0009-0007-4452-0162"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Haoliang Shi","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5138189878","display_name":"Ying Qi","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ying Qi","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5138162250","display_name":"Penghua Gao","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Penghua Gao","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5137664001","display_name":"M Yang","orcid":"https://orcid.org/0009-0009-3131-9915","observed_orcids":["https://orcid.org/0009-0009-3131-9915"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Min Yang","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5138149525","display_name":"Yongteng Zhao","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yongteng Zhao","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5147714047","display_name":"Jianwei Guo","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jianwei Guo","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5138181031","display_name":"Feiyan Huang","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Feiyan Huang","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5139394268","display_name":"Jiani Liu","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jiani Liu","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5123465880","display_name":"J Zhao","orcid":"https://orcid.org/0000-0001-9303-6528","observed_orcids":["https://orcid.org/0000-0001-9303-6528","https://orcid.org/0000-0002-7711-3762","https://orcid.org/0000-0002-9967-0121","https://orcid.org/0009-0006-0402-2364","https://orcid.org/0009-0006-3921-3304","https://orcid.org/0009-0009-3518-0922"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jianrong Zhao","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5139460899","display_name":"Lifang Li","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Lifang Li","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5139396721","display_name":"Lei Yu","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Lei Yu","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10385","display_name":"Plant Diversity and Evolution","score":0.9589999914169312,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10385","display_name":"Plant Diversity and Evolution","score":0.9589999914169312,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13168","display_name":"Plant Ecology and Taxonomy Studies","score":0.016200000420212746,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.00989999994635582,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/chloroplast-genome","display_name":"chloroplast genome","score":0.9850000143051147},{"id":"https://openalex.org/keywords/plastome-assembly","display_name":"plastome assembly","score":0.7350000143051147},{"id":"https://openalex.org/keywords/inverted-repeats","display_name":"inverted repeats","score":0.6940000057220459},{"id":"https://openalex.org/keywords/genome-annotation","display_name":"genome annotation","score":0.7459999918937683},{"id":"https://openalex.org/keywords/monophyly","display_name":"monophyly","score":0.6759999990463257},{"id":"https://openalex.org/keywords/pacbio-sequencing","display_name":"PacBio long-read sequencing","score":0.39500001072883606}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7670000195503235},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.7562000155448914},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.7432000041007996},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.6309999823570251},{"id":"https://openalex.org/C153957851","wikidata":"https://www.wikidata.org/wiki/Q201448","display_name":"Transfer RNA","level":4,"score":0.608299970626831},{"id":"https://openalex.org/C69305403","wikidata":"https://www.wikidata.org/wiki/Q47263","display_name":"Chloroplast","level":3,"score":0.5709999799728394},{"id":"https://openalex.org/C67905577","wikidata":"https://www.wikidata.org/wiki/Q215980","display_name":"Ribosomal RNA","level":3,"score":0.5349000096321106},{"id":"https://openalex.org/C51603236","wikidata":"https://www.wikidata.org/wiki/Q4852694","display_name":"Inverted repeat","level":4,"score":0.5109999775886536},{"id":"https://openalex.org/C61053724","wikidata":"https://www.wikidata.org/wiki/Q1154615","display_name":"Sequence analysis","level":3,"score":0.4625000059604645},{"id":"https://openalex.org/C186851281","wikidata":"https://www.wikidata.org/wiki/Q5156512","display_name":"Complete sequence","level":4,"score":0.4560999870300293},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.44749999046325684},{"id":"https://openalex.org/C48050816","wikidata":"https://www.wikidata.org/wiki/Q3182853","display_name":"Chloroplast DNA","level":4,"score":0.44359999895095825},{"id":"https://openalex.org/C24432333","wikidata":"https://www.wikidata.org/wiki/Q2068526","display_name":"Whole genome sequencing","level":4,"score":0.4203999936580658},{"id":"https://openalex.org/C90132467","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetics","level":3,"score":0.41769999265670776},{"id":"https://openalex.org/C18949551","wikidata":"https://www.wikidata.org/wiki/Q740578","display_name":"Sequence assembly","level":5,"score":0.39309999346733093},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.3711000084877014},{"id":"https://openalex.org/C23085057","wikidata":"https://www.wikidata.org/wiki/Q5532877","display_name":"Genetic analysis","level":3,"score":0.34880000352859497},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.31060001254081726},{"id":"https://openalex.org/C192953774","wikidata":"https://www.wikidata.org/wiki/Q7307127","display_name":"Reference genome","level":4,"score":0.3084999918937683},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.2962999939918518},{"id":"https://openalex.org/C12326286","wikidata":"https://www.wikidata.org/wiki/Q210958","display_name":"Monophyly","level":5,"score":0.27570000290870667},{"id":"https://openalex.org/C2992072516","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetic relationship","level":4,"score":0.275299996137619},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.2632000148296356},{"id":"https://openalex.org/C199216141","wikidata":"https://www.wikidata.org/wiki/Q4995178","display_name":"Conserved sequence","level":4,"score":0.2522999942302704}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.6084/m9.figshare.32801267","doi":"https://doi.org/10.6084/m9.figshare.32801267","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.32801267","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.32801267.v1","doi":"https://doi.org/10.6084/m9.figshare.32801267.v1","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.32801267.v1","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"doi:10.6084/m9.figshare.32801267","doi":"https://doi.org/10.6084/m9.figshare.32801267","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.32801267","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W7212125239","https://openalex.org/W4404604765","https://openalex.org/W7172009742","https://openalex.org/W7203919477","https://openalex.org/W7213535727","https://openalex.org/W2912605986","https://openalex.org/W2942422240","https://openalex.org/W7167252751","https://openalex.org/W4389388975","https://openalex.org/W7212930240"],"abstract_inverted_index":{"Amorphophallus":[0,18,87],"is":[1,31],"valued":[2],"for":[3,103],"its":[4],"glucomannan-rich":[5],"tubers":[6],"and":[7,36,50,73,106],"ornamental":[8],"inflorescences.":[9],"We":[10],"sequenced":[11],"the":[12,23],"first":[13],"complete":[14],"chloroplast":[15,29],"genome":[16,30],"of":[17,60,80],"atroviridis":[19],"Hett,":[20],"1994":[21],"using":[22],"PacBio":[24],"Revio":[25],"platform.":[26],"The":[27],"assembled":[28],"175,133":[32],"bp":[33,56],"in":[34,110],"length":[35],"contains":[37],"a":[38,44,85,100],"large":[39],"single-copy":[40,46],"region":[41,47],"(94,561":[42],"bp),":[43,49],"small":[45],"(14,862":[48],"two":[51],"inverted":[52],"repeat":[53],"regions":[54],"(32,855":[55],"each).":[57],"A":[58],"total":[59],"128":[61],"genes":[62],"were":[63],"annotated,":[64],"including":[65],"84":[66],"protein-coding":[67],"genes,":[68,72],"36":[69],"transfer":[70],"RNA":[71,76],"8":[74],"ribosomal":[75],"genes.":[77],"Phylogenetic":[78],"analysis":[79],"14":[81],"Araceae":[82],"species":[83],"confirmed":[84],"monophyletic":[86],"clade,":[88],"with":[89],"A.":[90],"atroviridias":[91],"closely":[92],"related":[93],"to":[94],"five":[95],"species.":[96],"This":[97],"study":[98],"provides":[99],"fundamental":[101],"resource":[102],"phylogenetic":[104],"studies":[105],"further":[107],"genetic":[108],"research":[109],"Araceae.":[111]},"counts_by_year":[],"updated_date":"2026-10-29T09:56:32.521200","created_date":"2026-06-27T00:00:00"}
