{"id":"https://openalex.org/W7140180716","doi":"https://doi.org/10.1016/j.pscychresns.2026.112201","title":"Comparison of automated subcortical segmentation methods: VolBrain vs. 3D Slicer in brain volumetry","display_name":"Comparison of automated subcortical segmentation methods: VolBrain vs. 3D Slicer in brain volumetry","publication_year":2026,"publication_date":"2026-03-24","ids":{"openalex":"https://openalex.org/W7140180716","doi":"https://doi.org/10.1016/j.pscychresns.2026.112201","pmid":"https://pubmed.ncbi.nlm.nih.gov/41905291"},"language":"en","primary_location":{"id":"doi:10.1016/j.pscychresns.2026.112201","doi":"https://doi.org/10.1016/j.pscychresns.2026.112201","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.pscychresns.2026.112201","pdf_url":null,"source":{"id":"https://openalex.org/S4210222969","display_name":"Psychiatry Research Neuroimaging","issn_l":"0925-4927","issn":["0925-4927","1872-7506"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Psychiatry Research: Neuroimaging","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5077891242","display_name":"Niyazi Acer","orcid":"https://orcid.org/0000-0002-4155-7759","observed_orcids":["https://orcid.org/0000-0002-4155-7759"]},"institutions":[{"id":"https://openalex.org/I4210135744","display_name":"Sanko University","ror":"https://ror.org/04a94ee43","country_code":"TR","type":"education","lineage":["https://openalex.org/I4210135744"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Niyazi Acer","raw_affiliation_strings":["Department of Anatomy, Faculty of Medicine, Sanko University, Gaziantep, Turkey"],"raw_orcid":"https://orcid.org/0000-0002-4155-7759","affiliations":[{"raw_affiliation_string":"Department of Anatomy, Faculty of Medicine, Sanko University, Gaziantep, Turkey","institution_ids":["https://openalex.org/I4210135744"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074908950","display_name":"\u00d6zg\u00fcr PALANCI","orcid":"https://orcid.org/0000-0003-0396-7455","observed_orcids":["https://orcid.org/0000-0003-0396-7455"]},"institutions":[{"id":"https://openalex.org/I143914637","display_name":"G\u00fcm\u00fc\u015fhane University","ror":"https://ror.org/00r9t7n55","country_code":"TR","type":"education","lineage":["https://openalex.org/I143914637"]},{"id":"https://openalex.org/I162720556","display_name":"Karadeniz Technical University","ror":"https://ror.org/03z8fyr40","country_code":"TR","type":"education","lineage":["https://openalex.org/I162720556"]}],"countries":["TR"],"is_corresponding":true,"raw_author_name":"Ozg\u00fcr Palanc\u0131","raw_affiliation_strings":["Department of Anatomy, Faculty of Medicine, Karadeniz Technical University, Trabzon, Turkey; Department of Nursing, Faculty of Health Sciences, G\u00fcm\u00fc\u015fhane University, G\u00fcm\u00fc\u015fhane, Turkey. Electronic address: opalanci@gumushane.edu.tr"],"raw_orcid":"https://orcid.org/0000-0003-0396-7455","affiliations":[{"raw_affiliation_string":"Department of Anatomy, Faculty of Medicine, Karadeniz Technical University, Trabzon, Turkey; Department of Nursing, Faculty of Health Sciences, G\u00fcm\u00fc\u015fhane University, G\u00fcm\u00fc\u015fhane, Turkey. Electronic address: opalanci@gumushane.edu.tr","institution_ids":["https://openalex.org/I143914637","https://openalex.org/I162720556"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031544079","display_name":"Funda \u0130pekten","orcid":"https://orcid.org/0000-0002-6916-9563","observed_orcids":["https://orcid.org/0000-0002-6916-9563"]},"institutions":[{"id":"https://openalex.org/I198587356","display_name":"Ad\u0131yaman University","ror":"https://ror.org/02s4gkg68","country_code":"TR","type":"education","lineage":["https://openalex.org/I198587356"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Funda Ipekten","raw_affiliation_strings":["Department of Biostatistics and Medical Informatics, Faculty of Medicine, Adiyaman University, Adiyaman, Turkey"],"raw_orcid":"https://orcid.org/0000-0002-6916-9563","affiliations":[{"raw_affiliation_string":"Department of Biostatistics and Medical Informatics, Faculty of Medicine, Adiyaman University, Adiyaman, Turkey","institution_ids":["https://openalex.org/I198587356"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5146585750","display_name":"Furkan Mert Erdo\u011fan","orcid":"https://orcid.org/0009-0004-7432-5438","observed_orcids":["https://orcid.org/0009-0004-7432-5438"]},"institutions":[{"id":"https://openalex.org/I12387023","display_name":"Trakya University","ror":"https://ror.org/00xa0xn82","country_code":"TR","type":"education","lineage":["https://openalex.org/I12387023"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Furkan Mert Erdo\u011fan","raw_affiliation_strings":["Department of Anatomy, Faculty of Medicine, Trakya University, Edirne, T\u00fcrkiye"],"raw_orcid":"https://orcid.org/0009-0004-7432-5438","affiliations":[{"raw_affiliation_string":"Department of Anatomy, Faculty of Medicine, Trakya University, Edirne, T\u00fcrkiye","institution_ids":["https://openalex.org/I12387023"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058017743","display_name":"Burhan Yarar","orcid":"https://orcid.org/0000-0003-2569-3352","observed_orcids":["https://orcid.org/0000-0003-2569-3352"]},"institutions":[{"id":"https://openalex.org/I64134780","display_name":"Atat\u00fcrk University","ror":"https://ror.org/03je5c526","country_code":"TR","type":"education","lineage":["https://openalex.org/I64134780"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Burhan Yarar","raw_affiliation_strings":["Department of Anatomy, Faculty of Medicine, Atat\u00fcrk University, Erzurum, Turkey"],"raw_orcid":"https://orcid.org/0000-0003-2569-3352","affiliations":[{"raw_affiliation_string":"Department of Anatomy, Faculty of Medicine, Atat\u00fcrk University, Erzurum, Turkey","institution_ids":["https://openalex.org/I64134780"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5053982534","display_name":"Ali Faruk \u00d6zya\u015far","orcid":"https://orcid.org/0000-0002-5396-9486","observed_orcids":["https://orcid.org/0000-0002-5396-9486"]},"institutions":[{"id":"https://openalex.org/I162720556","display_name":"Karadeniz Technical University","ror":"https://ror.org/03z8fyr40","country_code":"TR","type":"education","lineage":["https://openalex.org/I162720556"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Ali Faruk Ozya\u015far","raw_affiliation_strings":["Department of Anatomy, Faculty of Medicine, Karadeniz Technical University, Trabzon, Turkey"],"raw_orcid":"https://orcid.org/0000-0002-5396-9486","affiliations":[{"raw_affiliation_string":"Department of Anatomy, Faculty of Medicine, Karadeniz Technical University, Trabzon, Turkey","institution_ids":["https://openalex.org/I162720556"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5074908950"],"corresponding_institution_ids":["https://openalex.org/I143914637","https://openalex.org/I162720556"],"apc_list":{"value":3110,"currency":"USD","value_usd":3110},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.15370463,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"359","issue":null,"first_page":"112201","last_page":"112201"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10378","display_name":"Advanced MRI Techniques and Applications","score":0.000699999975040555,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12702","display_name":"Brain Tumor Detection and Classification","score":0.0005000000237487257,"subfield":{"id":"https://openalex.org/subfields/2808","display_name":"Neurology"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/automatic-segmentation","display_name":"automatic segmentation","score":0.7839999794960022},{"id":"https://openalex.org/keywords/volbrain","display_name":"volBrain","score":0.9789999723434448},{"id":"https://openalex.org/keywords/3d-slicer","display_name":"3D Slicer","score":0.9980000257492065},{"id":"https://openalex.org/keywords/caudate-nucleus","display_name":"caudate nucleus","score":0.824999988079071},{"id":"https://openalex.org/keywords/thalamus","display_name":"thalamus","score":0.9919999837875366},{"id":"https://openalex.org/keywords/hippocampus","display_name":"hippocampus","score":0.9980000257492065},{"id":"https://openalex.org/keywords/amygdala","display_name":"amygdala","score":0.9990000128746033},{"id":"https://openalex.org/keywords/globus-pallidus","display_name":"globus pallidus","score":0.9959999918937683},{"id":"https://openalex.org/keywords/nucleus-accumbens","display_name":"nucleus accumbens","score":0.9990000128746033},{"id":"https://openalex.org/keywords/method-agreement","display_name":"measurement agreement","score":0.6019999980926514}],"concepts":[{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.5455999970436096},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5074999928474426},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.4456999897956848},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.4032000005245209},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.40070000290870667},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3785000145435333},{"id":"https://openalex.org/C58693492","wikidata":"https://www.wikidata.org/wiki/Q551875","display_name":"Neuroimaging","level":2,"score":0.35199999809265137},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.34299999475479126},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.3366999924182892},{"id":"https://openalex.org/C50231774","wikidata":"https://www.wikidata.org/wiki/Q639842","display_name":"Brain mapping","level":2,"score":0.3255999982357025},{"id":"https://openalex.org/C103378370","wikidata":"https://www.wikidata.org/wiki/Q948647","display_name":"Neuroanatomy","level":2,"score":0.26460000872612}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009929","descriptor_name":"Organ Size","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059906","descriptor_name":"Neuroimaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1016/j.pscychresns.2026.112201","doi":"https://doi.org/10.1016/j.pscychresns.2026.112201","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.pscychresns.2026.112201","pdf_url":null,"source":{"id":"https://openalex.org/S4210222969","display_name":"Psychiatry Research Neuroimaging","issn_l":"0925-4927","issn":["0925-4927","1872-7506"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Psychiatry Research: Neuroimaging","raw_type":"journal-article"},{"id":"pmid:41905291","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41905291","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Psychiatry research. Neuroimaging","raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.5683000087738037}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W1909740415","https://openalex.org/W2019587683","https://openalex.org/W2026616100","https://openalex.org/W2054422278","https://openalex.org/W2127890285","https://openalex.org/W2142903958","https://openalex.org/W2327037637","https://openalex.org/W2476839077","https://openalex.org/W2903790239","https://openalex.org/W2909941834","https://openalex.org/W2943132664","https://openalex.org/W2949863098","https://openalex.org/W2983483640","https://openalex.org/W3138526177","https://openalex.org/W3146588434","https://openalex.org/W4283825977","https://openalex.org/W4294842910","https://openalex.org/W4360802582","https://openalex.org/W4385497030","https://openalex.org/W4388975621","https://openalex.org/W4408522847"],"related_works":["https://openalex.org/W4283825977","https://openalex.org/W2794245079","https://openalex.org/W7223206711","https://openalex.org/W2027794380","https://openalex.org/W3146588434","https://openalex.org/W2766214860","https://openalex.org/W2593009668","https://openalex.org/W4404772140","https://openalex.org/W3136361626","https://openalex.org/W1987565821"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-10-31T12:09:11.096373","created_date":"2026-03-25T00:00:00"}