{"id":"https://openalex.org/W7129015244","doi":"https://doi.org/10.48723/g2m1-jm64","title":"Data from immunocompromised individuals vaccinated with SARS-CoV2 vaccines: antibody titers, B cell receptor repertoire sequencing, and B cell immunophenotyping","display_name":"Data from immunocompromised individuals vaccinated with SARS-CoV2 vaccines: antibody titers, B cell receptor repertoire sequencing, and B cell immunophenotyping","publication_year":2026,"publication_date":"2026-02-16","ids":{"openalex":"https://openalex.org/W7129015244","doi":"https://doi.org/10.48723/g2m1-jm64"},"language":"en","primary_location":{"id":"doi:10.48723/bbag-t656","doi":"https://doi.org/10.48723/bbag-t656","is_oa":true,"landing_page_url":"https://doi.org/10.48723/bbag-t656","pdf_url":null,"source":{"id":"https://openalex.org/S7407053273","display_name":"Karolinska Institutet / DORIS repository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},"volume":null,"type":"dataset","is_traditional":false,"indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.48723/bbag-t656","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5033560948","display_name":"Fredrika Hellgren","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Hellgren, Fredrika","raw_affiliation_strings":["Department of Medicine, Solna [K2], Karolinska Institutet"],"raw_orcid":"https://orcid.org/0009-0009-5491-6034","affiliations":[{"raw_affiliation_string":"Department of Medicine, Solna [K2], Karolinska Institutet","institution_ids":["https://openalex.org/I28166907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005542278","display_name":"Rodrigo Arcoverde Cerveira","orcid":"https://orcid.org/0000-0002-1145-2534","observed_orcids":["https://orcid.org/0000-0002-1145-2534"]},"institutions":[{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Arcoverde Cerveira da Silva, Rodrigo","raw_affiliation_strings":["Department of Medicine, Solna [K2], Karolinska Institutet"],"raw_orcid":"https://orcid.org/0000-0002-1145-2534","affiliations":[{"raw_affiliation_string":"Department of Medicine, Solna [K2], Karolinska Institutet","institution_ids":["https://openalex.org/I28166907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060575051","display_name":"Karin Lor\u00e9","orcid":"https://orcid.org/0000-0001-7679-9494","observed_orcids":["https://orcid.org/0000-0001-7679-9494"]},"institutions":[{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Lore, Karin","raw_affiliation_strings":["Department of Medicine, Solna [K2], Karolinska Institutet"],"raw_orcid":"https://orcid.org/0000-0001-7679-9494","affiliations":[{"raw_affiliation_string":"Department of Medicine, Solna [K2], Karolinska Institutet","institution_ids":["https://openalex.org/I28166907"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5126152203","display_name":"Karolinska Institutet","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Karolinska Institutet","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10031","display_name":"T-cell and B-cell Immunology","score":0.0012000000569969416,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.0005000000237487257,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/covid-19-vaccines","display_name":"COVID-19 vaccines","score":0.902999997138977},{"id":"https://openalex.org/keywords/immunocompromised-patients","display_name":"immunocompromised patients","score":0.9079999923706055},{"id":"https://openalex.org/keywords/b-cell-repertoire","display_name":"B cell receptor repertoire","score":0.953000009059906},{"id":"https://openalex.org/keywords/antigen-specific-b-cells","display_name":"antigen-specific B cells","score":0.722000002861023},{"id":"https://openalex.org/keywords/spike-protein","display_name":"spike protein","score":0.5929999947547913},{"id":"https://openalex.org/keywords/antibody-titers","display_name":"antibody titers","score":0.8349999785423279},{"id":"https://openalex.org/keywords/b-cell-immunophenotyping","display_name":"B cell immunophenotyping","score":0.9369999766349792},{"id":"https://openalex.org/keywords/igg","display_name":"IgG","score":0.6639999747276306},{"id":"https://openalex.org/keywords/igm","display_name":"IgM","score":0.9980000257492065},{"id":"https://openalex.org/keywords/v-d-j-recombination","display_name":"V(D)J recombination","score":0.6520000100135803}],"concepts":[{"id":"https://openalex.org/C2778473898","wikidata":"https://www.wikidata.org/wiki/Q2145110","display_name":"Repertoire","level":2,"score":0.7476999759674072},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.708299994468689},{"id":"https://openalex.org/C43907098","wikidata":"https://www.wikidata.org/wiki/Q903924","display_name":"breakpoint cluster region","level":3,"score":0.6097000241279602},{"id":"https://openalex.org/C157695867","wikidata":"https://www.wikidata.org/wiki/Q1100474","display_name":"B-cell receptor","level":4,"score":0.6010000109672546},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5501000285148621},{"id":"https://openalex.org/C2778453870","wikidata":"https://www.wikidata.org/wiki/Q188930","display_name":"B cell","level":3,"score":0.5404000282287598},{"id":"https://openalex.org/C76818968","wikidata":"https://www.wikidata.org/wiki/Q181940","display_name":"Sanger sequencing","level":4,"score":0.5327000021934509},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.49709999561309814},{"id":"https://openalex.org/C111696304","wikidata":"https://www.wikidata.org/wiki/Q2303697","display_name":"Sorting","level":2,"score":0.47920000553131104},{"id":"https://openalex.org/C196166836","wikidata":"https://www.wikidata.org/wiki/Q902926","display_name":"Immunophenotyping","level":3,"score":0.4311000108718872},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.42879998683929443},{"id":"https://openalex.org/C159654299","wikidata":"https://www.wikidata.org/wiki/Q79460","display_name":"Antibody","level":2,"score":0.41780000925064087},{"id":"https://openalex.org/C154504017","wikidata":"https://www.wikidata.org/wiki/Q853614","display_name":"Identifier","level":2,"score":0.38839998841285706},{"id":"https://openalex.org/C2910693471","wikidata":"https://www.wikidata.org/wiki/Q79460","display_name":"Antibody Repertoire","level":3,"score":0.3723999857902527},{"id":"https://openalex.org/C2778630268","wikidata":"https://www.wikidata.org/wiki/Q17113277","display_name":"Cell sorting","level":3,"score":0.34279999136924744},{"id":"https://openalex.org/C170493617","wikidata":"https://www.wikidata.org/wiki/Q208467","display_name":"Receptor","level":2,"score":0.3319000005722046},{"id":"https://openalex.org/C2776235265","wikidata":"https://www.wikidata.org/wiki/Q18392052","display_name":"Fragment (logic)","level":2,"score":0.3301999866962433},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.30390000343322754},{"id":"https://openalex.org/C81089528","wikidata":"https://www.wikidata.org/wiki/Q5134986","display_name":"clone (Java method)","level":3,"score":0.2939000129699707},{"id":"https://openalex.org/C96007430","wikidata":"https://www.wikidata.org/wiki/Q3776943","display_name":"Immunoglobulin heavy chain","level":3,"score":0.29350000619888306},{"id":"https://openalex.org/C49105822","wikidata":"https://www.wikidata.org/wiki/Q176996","display_name":"Polymerase chain reaction","level":3,"score":0.2921000123023987},{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.29170000553131104},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.2782999873161316},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.27720001339912415},{"id":"https://openalex.org/C198531522","wikidata":"https://www.wikidata.org/wiki/Q485146","display_name":"Sample (material)","level":2,"score":0.2745000123977661},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.27379998564720154},{"id":"https://openalex.org/C132917006","wikidata":"https://www.wikidata.org/wiki/Q5250436","display_name":"Deep sequencing","level":4,"score":0.271699994802475},{"id":"https://openalex.org/C200180986","wikidata":"https://www.wikidata.org/wiki/Q3269473","display_name":"Naive B cell","level":5,"score":0.2696000039577484},{"id":"https://openalex.org/C61053724","wikidata":"https://www.wikidata.org/wiki/Q1154615","display_name":"Sequence analysis","level":3,"score":0.2662000060081482},{"id":"https://openalex.org/C19317047","wikidata":"https://www.wikidata.org/wiki/Q412037","display_name":"T-cell receptor","level":4,"score":0.2558000087738037}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.48723/bbag-t656","doi":"https://doi.org/10.48723/bbag-t656","is_oa":true,"landing_page_url":"https://doi.org/10.48723/bbag-t656","pdf_url":null,"source":{"id":"https://openalex.org/S7407053273","display_name":"Karolinska Institutet / DORIS repository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},{"id":"doi:10.48723/g2m1-jm64","doi":"https://doi.org/10.48723/g2m1-jm64","is_oa":true,"landing_page_url":"https://doi.org/10.48723/g2m1-jm64","pdf_url":null,"source":{"id":"https://openalex.org/S7407053273","display_name":"Karolinska Institutet / DORIS repository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"doi:10.48723/bbag-t656","doi":"https://doi.org/10.48723/bbag-t656","is_oa":true,"landing_page_url":"https://doi.org/10.48723/bbag-t656","pdf_url":null,"source":{"id":"https://openalex.org/S7407053273","display_name":"Karolinska Institutet / DORIS repository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},"sustainable_development_goals":[{"score":0.8560000061988831,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G3470132804","display_name":null,"funder_award_id":"2021-0017","funder_id":"https://openalex.org/F4320322327","funder_display_name":"Knut och Alice Wallenbergs Stiftelse"},{"id":"https://openalex.org/G4255327724","display_name":null,"funder_award_id":"21 1728 Pj","funder_id":"https://openalex.org/F4320321491","funder_display_name":"Cancerfonden"},{"id":"https://openalex.org/G5634336632","display_name":null,"funder_award_id":"2021-04779_VR","funder_id":"https://openalex.org/F4320322581","funder_display_name":"Vetenskapsr\u00e5det"}],"funders":[{"id":"https://openalex.org/F4320321491","display_name":"Cancerfonden","ror":"https://ror.org/0527jb766"},{"id":"https://openalex.org/F4320322327","display_name":"Knut och Alice Wallenbergs Stiftelse","ror":"https://ror.org/004hzzk67"},{"id":"https://openalex.org/F4320322581","display_name":"Vetenskapsr\u00e5det","ror":"https://ror.org/03zttf063"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4394022343","https://openalex.org/W7119708984","https://openalex.org/W4394050532","https://openalex.org/W4288429849","https://openalex.org/W3200553030","https://openalex.org/W7083291021","https://openalex.org/W4393604446","https://openalex.org/W7141509870","https://openalex.org/W7202295426","https://openalex.org/W7168277859"],"abstract_inverted_index":{"The":[0,115],"dataset":[1,119],"contains":[2],"B":[3,21],"cell":[4],"receptor":[5],"(BCR)":[6],"sequencing":[7,33,50],"data.":[8],"Two":[9],"types":[10],"of":[11,117],"data":[12],"are":[13,37,65,109,113],"included:":[14],"Antigen-specific":[15],"BCR":[16,48],"sequences":[17,64],"obtained":[18],"by":[19,29],"sorting":[20,95],"cells":[22],"(CD19+,":[23],"CD20+,":[24],"IgG+,":[25],"IgM-,":[26],"Spike+)":[27],"followed":[28],"PCR":[30],"and":[31,41,53,61,77,86,94],"Sanger":[32],"for":[34,51],"SARS-CoV-2.":[35],"Sequences":[36],"provided":[38,66],"per":[39,59],"individual":[40,60],"also":[42],"as":[43,67],"a":[44],"combined":[45],"dataset.":[46],"Bulk":[47],"repertoire":[49],"IgM":[52],"IgG,":[54],"with":[55],"one":[56],"FASTQ":[57,68],"file":[58],"sample.":[62],"All":[63],"or":[69],"FASTA":[70],"files.":[71],"Users":[72],"will":[73],"need":[74],"to":[75],"realign":[76],"re-annotate":[78],"VDJ":[79],"segments":[80],"using":[81],"their":[82],"preferred":[83],"reference":[84],"database":[85],"software.":[87],"More":[88],"details":[89],"on":[90],"the":[91,101,118],"experimental":[92],"design":[93],"strategy":[96],"can":[97],"be":[98],"found":[99],"in":[100],"published":[102],"paper:":[103],"DOI":[104],"10.1002/cti2.70077":[105],"No":[106],"direct":[107],"identifiers":[108],"included;":[110],"sample":[111],"IDs":[112],"pseudonymized.":[114],"size":[116],"is":[120],"approximately":[121],"30":[122],"GB.":[123]},"counts_by_year":[],"updated_date":"2026-10-12T09:40:04.860316","created_date":"2026-02-17T00:00:00"}
