{"id":"https://openalex.org/W7128948633","doi":"https://doi.org/10.5281/zenodo.18647170","title":"rmuraix/HistoSlice: 0.5.0","display_name":"rmuraix/HistoSlice: 0.5.0","publication_year":2026,"publication_date":"2026-02-15","ids":{"openalex":"https://openalex.org/W7128948633","doi":"https://doi.org/10.5281/zenodo.18647170"},"language":"en","primary_location":{"id":"doi:10.5281/zenodo.18647170","doi":"https://doi.org/10.5281/zenodo.18647170","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.18647170","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Software"},"volume":null,"type":"software","is_traditional":false,"indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.5281/zenodo.18647170","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5000460972","display_name":"Ryota Murai","orcid":"https://orcid.org/0009-0007-0248-9267","observed_orcids":["https://orcid.org/0009-0007-0248-9267"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ryota Murai","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5126046100","display_name":"Jopo","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Jopo","raw_affiliation_strings":["University of Helsinki"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Helsinki","institution_ids":["https://openalex.org/I133731052"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.30880001187324524,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.30880001187324524,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.19529999792575836,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.031300000846385956,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/image-segmentation","display_name":"image segmentation","score":0.503000020980835},{"id":"https://openalex.org/keywords/command-line-interface","display_name":"command-line interface","score":0.8550000190734863},{"id":"https://openalex.org/keywords/metadata","display_name":"metadata","score":0.4779999852180481}],"concepts":[{"id":"https://openalex.org/C19768560","wikidata":"https://www.wikidata.org/wiki/Q320727","display_name":"Dependency (UML)","level":2,"score":0.6086999773979187},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.40380001068115234},{"id":"https://openalex.org/C136886441","wikidata":"https://www.wikidata.org/wiki/Q926129","display_name":"Normalization (sociology)","level":2,"score":0.3578999936580658},{"id":"https://openalex.org/C946207","wikidata":"https://www.wikidata.org/wiki/Q327954","display_name":"Torch","level":3,"score":0.3345000147819519},{"id":"https://openalex.org/C2777267654","wikidata":"https://www.wikidata.org/wiki/Q3519023","display_name":"Test (biology)","level":2,"score":0.28839999437332153},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.218299999833107},{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.1996999979019165},{"id":"https://openalex.org/C162984825","wikidata":"https://www.wikidata.org/wiki/Q339072","display_name":"Database normalization","level":3,"score":0.1973000019788742},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.19429999589920044},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.18850000202655792}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.5281/zenodo.18647170","doi":"https://doi.org/10.5281/zenodo.18647170","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.18647170","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Software"},{"id":"doi:10.5281/zenodo.18647171","doi":"https://doi.org/10.5281/zenodo.18647171","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.18647171","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Software"},{"id":"doi:10.5281/zenodo.18767982","doi":"https://doi.org/10.5281/zenodo.18767982","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.18767982","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Software"}],"best_oa_location":{"id":"doi:10.5281/zenodo.18647170","doi":"https://doi.org/10.5281/zenodo.18647170","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.18647170","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Software"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W7166577973","https://openalex.org/W6969623906","https://openalex.org/W6967267189","https://openalex.org/W6949668901","https://openalex.org/W4399578910"],"abstract_inverted_index":{"What's":[0],"Changed":[1],"Add":[2,16],"comprehensive":[3,17],"CLI":[4],"reference":[5,20],"documentation":[6,21],"with":[7,39],"option":[8],"tables":[9],"and":[10,253],"examples":[11],"by":[12,22,33,43,53,63,73,83,93,103,113,123,133,143,153,163,173,183,193,204,215,225,235,245,256,264,275,285,295],"@Copilot":[13,23,34,44],"in":[14,24,31,35,45,55,65,75,85,95,105,115,125,135,145,155,165,175,185,195,206,217,227,237,247,258,266,277,287,297,306],"https://github.com/rmuraix/HistoSlice/pull/46":[15],"metadata":[18],"field":[19],"https://github.com/rmuraix/HistoSlice/pull/47":[25],"docs:":[26],"fix":[27],"duplicate":[28],"nav":[29],"sections":[30],"mkdocs.yml":[32],"https://github.com/rmuraix/HistoSlice/pull/49":[36],"Replace":[37],"MPire":[38],"standard":[40],"library":[41],"multiprocessing":[42],"https://github.com/rmuraix/HistoSlice/pull/48":[46],"chore(deps):":[47,57,67,77,87,97,107,117,127,137,147,157,167,177,187,197,208,219,229,239,268,279,289],"update":[48,58,68,78,88,98,108,118,128,138,148,158,168,178,188,220,230,240,269,280,290],"actions/upload-artifact":[49,221],"action":[50,60,110,222,232],"to":[51,61,71,81,91,101,111,121,131,141,151,161,171,181,191,202,213,223,233,243,272,283,293],"v5":[52],"@renovate[bot]":[54,64,74,84,94,104,114,124,134,144,154,164,174,184,194,226,236,246,276,286,296],"https://github.com/rmuraix/HistoSlice/pull/44":[56],"actions/download-artifact":[59,231],"v6":[62,112,224],"https://github.com/rmuraix/HistoSlice/pull/43":[66],"dependency":[69,79,89,99,119,129,139,149,159,169,179,189,241,270,281,291],"mkdocs-material":[70,100,150],"v9.6.23":[72],"https://github.com/rmuraix/HistoSlice/pull/50":[76],"ruff":[80,90,120,130,140,160,170,180,190,282],"v0.14.4":[82],"https://github.com/rmuraix/HistoSlice/pull/51":[86],"v0.14.5":[92],"https://github.com/rmuraix/HistoSlice/pull/52":[96],"v9.7.0":[102],"https://github.com/rmuraix/HistoSlice/pull/53":[106],"actions/checkout":[109],"https://github.com/rmuraix/HistoSlice/pull/55":[116],"v0.14.6":[122],"https://github.com/rmuraix/HistoSlice/pull/57":[126],"v0.14.8":[132],"https://github.com/rmuraix/HistoSlice/pull/61":[136],"v0.14.9":[142],"https://github.com/rmuraix/HistoSlice/pull/63":[146],"v9.7.1":[152],"https://github.com/rmuraix/HistoSlice/pull/64":[156],"v0.14.10":[162],"https://github.com/rmuraix/HistoSlice/pull/65":[166],"v0.14.11":[172],"https://github.com/rmuraix/HistoSlice/pull/68":[176],"v0.14.13":[182],"https://github.com/rmuraix/HistoSlice/pull/69":[186],"v0.14.14":[192],"https://github.com/rmuraix/HistoSlice/pull/72":[196],"bump":[198,209],"urllib3":[199],"from":[200,211],"2.5.0":[201],"2.6.3":[203],"@dependabot[bot]":[205,216,301],"https://github.com/rmuraix/HistoSlice/pull/70":[207,307],"fonttools":[210],"4.60.1":[212],"4.60.2":[214],"https://github.com/rmuraix/HistoSlice/pull/71":[218],"https://github.com/rmuraix/HistoSlice/pull/67":[228],"v7":[234],"https://github.com/rmuraix/HistoSlice/pull/66":[238],"pytest":[242],"v9":[244],"https://github.com/rmuraix/HistoSlice/pull/54":[248],"feat!:":[249],"drop":[250],"Pillow,":[251],"openslide":[252],"czi":[254],"backend":[255],"@rmuraix":[257,265],"https://github.com/rmuraix/HistoSlice/pull/76":[259],"chore:":[260],"support":[261],"Python":[262],"3.13":[263],"https://github.com/rmuraix/HistoSlice/pull/77":[267],"pillow":[271],"v12.1.1":[273],"[security]":[274],"https://github.com/rmuraix/HistoSlice/pull/75":[278],"v0.15.0":[284],"https://github.com/rmuraix/HistoSlice/pull/73":[288],"mkdocstrings":[292],"v1":[294],"https://github.com/rmuraix/HistoSlice/pull/58":[298],"New":[299],"Contributors":[300],"made":[302],"their":[303],"first":[304],"contribution":[305],"Full":[308],"Changelog:":[309],"https://github.com/rmuraix/HistoSlice/compare/0.4.0...0.5.0":[310]},"counts_by_year":[],"updated_date":"2026-11-08T12:12:28.789561","created_date":"2026-02-16T00:00:00"}