{"id":"https://openalex.org/W7127064734","doi":"https://doi.org/10.5281/zenodo.18458315","title":"BIOINFORMATICS IN MYCOLOGY: TECHNIQUES FOR ACCURATE FUNGAL IDENTIFICATION","display_name":"BIOINFORMATICS IN MYCOLOGY: TECHNIQUES FOR ACCURATE FUNGAL IDENTIFICATION","publication_year":2025,"publication_date":"2025-02-17","ids":{"openalex":"https://openalex.org/W7127064734","doi":"https://doi.org/10.5281/zenodo.18458315"},"language":"en","primary_location":{"id":"doi:10.5281/zenodo.18458315","doi":"https://doi.org/10.5281/zenodo.18458315","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.18458315","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article-journal"},"volume":null,"type":"article","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.5281/zenodo.18458315","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5124764952","display_name":"Emeka Chukwuemeka Okoro","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I96576516","display_name":"Rivers State University","ror":"https://ror.org/01kr7aq59","country_code":"NG","type":"education","lineage":["https://openalex.org/I96576516"]}],"countries":["NG"],"is_corresponding":false,"raw_author_name":"Okoro, Emeka Chukwuemeka","raw_affiliation_strings":["Department of Microbiology, Rivers State University, Port Harcourt, Rivers State, Nigeria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology, Rivers State University, Port Harcourt, Rivers State, Nigeria","institution_ids":["https://openalex.org/I96576516"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5124863828","display_name":"Chibuzor Ifeanyi Nwankwo","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I96576516","display_name":"Rivers State University","ror":"https://ror.org/01kr7aq59","country_code":"NG","type":"education","lineage":["https://openalex.org/I96576516"]}],"countries":["NG"],"is_corresponding":false,"raw_author_name":"Nwankwo, Chibuzor Ifeanyi","raw_affiliation_strings":["Department of Microbiology, Rivers State University, Port Harcourt, Rivers State, Nigeria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology, Rivers State University, Port Harcourt, Rivers State, Nigeria","institution_ids":["https://openalex.org/I96576516"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I96576516"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.3604608,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.3862000107765198,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.3862000107765198,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10825","display_name":"Plant Pathogens and Fungal Diseases","score":0.35670000314712524,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10497","display_name":"Fungal and yeast genetics research","score":0.10090000182390213,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/fungal-identification","display_name":"fungal identification","score":0.9729999899864197},{"id":"https://openalex.org/keywords/blast","display_name":"BLAST","score":0.9139999747276306},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"sequence alignment","score":0.6660000085830688},{"id":"https://openalex.org/keywords/aspergillus-niger","display_name":"Aspergillus niger","score":0.9240000247955322},{"id":"https://openalex.org/keywords/fungal-genome","display_name":"fungal genome","score":0.6439999938011169},{"id":"https://openalex.org/keywords/fungal-taxonomy","display_name":"fungal taxonomy","score":0.7630000114440918},{"id":"https://openalex.org/keywords/medical-mycology","display_name":"medical mycology","score":0.824999988079071},{"id":"https://openalex.org/keywords/species-identification","display_name":"species identification","score":0.35499998927116394},{"id":"https://openalex.org/keywords/18s-rrna","display_name":"18S rRNA","score":0.8299999833106995}],"concepts":[{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.795799970626831},{"id":"https://openalex.org/C79029880","wikidata":"https://www.wikidata.org/wiki/Q901755","display_name":"GenBank","level":3,"score":0.6205000281333923},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5586000084877014},{"id":"https://openalex.org/C184898388","wikidata":"https://www.wikidata.org/wiki/Q1435712","display_name":"Pairwise comparison","level":2,"score":0.524399995803833},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4309000074863434},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4081999957561493},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.4011000096797943},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.39410001039505005},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3910999894142151},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.37860000133514404},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.3431999981403351},{"id":"https://openalex.org/C61053724","wikidata":"https://www.wikidata.org/wiki/Q1154615","display_name":"Sequence analysis","level":3,"score":0.3379000127315521},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.3301999866962433},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.28519999980926514},{"id":"https://openalex.org/C2779175654","wikidata":"https://www.wikidata.org/wiki/Q335130","display_name":"Aspergillus","level":2,"score":0.2551000118255615}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.5281/zenodo.18458315","doi":"https://doi.org/10.5281/zenodo.18458315","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.18458315","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"},{"id":"doi:10.5281/zenodo.18458316","doi":"https://doi.org/10.5281/zenodo.18458316","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.18458316","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.5281/zenodo.18458315","doi":"https://doi.org/10.5281/zenodo.18458315","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.18458315","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article-journal"},"sustainable_development_goals":[],"sustainable_development_goals_aurora":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"Bioinformatics":[0],"employs":[1],"computational":[2,152],"methods":[3],"to":[4,73,102,156],"address":[5],"complex":[6],"biotechnological":[7],"problems":[8],"and":[9,46,63,113,129,137,147,163],"represents":[10],"a":[11,83],"key":[12],"outcome":[13],"of":[14,42,94,122,134],"molecular-level":[15],"genetic":[16,71],"research.":[17],"This":[18],"paper":[19],"focuses":[20],"on":[21,106],"applying":[22],"the":[23,107,120,158],"Basic":[24],"Local":[25],"Alignment":[26],"Search":[27],"Tool":[28],"(BLAST)":[29],"for":[30,125,144,161],"fungal":[31,85,127,167],"identification.":[32],"BLAST":[33,69],"performs":[34],"sequence":[35,87],"analysis":[36],"through":[37],"pairwise":[38],"or":[39],"multiple":[40],"comparisons":[41],"nucleic":[43],"acids":[44],"(NAs)":[45],"other":[47],"sequences,":[48],"offering":[49],"significant":[50],"bioinformatic":[51,123],"insights.":[52],"Unlike":[53],"conventional":[54],"phenotypic":[55],"methods,":[56],"which":[57],"often":[58],"misidentify":[59],"closely":[60],"related":[61],"species":[62],"pose":[64],"risks":[65],"in":[66,166],"medical":[67],"mycology,":[68],"utilizes":[70],"information":[72],"achieve":[74],"species-specific":[75],"identification":[76,115,128],"with":[77],"greater":[78],"accuracy.":[79],"In":[80],"this":[81],"study,":[82],"complete":[84],"genome":[86],"from":[88],"GenBank":[89],"(used":[90],"here":[91],"illustratively":[92],"instead":[93],"18S":[95],"rRNA)":[96],"was":[97],"analyzed,":[98],"yielding":[99],"hits":[100],"corresponding":[101],"Aspergillus":[103],"niger":[104],"based":[105],"maximum":[108],"score":[109],"(4.093e+05),":[110],"E-value":[111],"(0.0),":[112],"100%":[114],"match.":[116],"The":[117],"results":[118,165],"highlight":[119],"potential":[121],"approaches":[124],"precise":[126],"taxonomy.":[130],"With":[131],"ongoing":[132],"development":[133],"more":[135],"functional":[136],"accurate":[138],"algorithms,":[139],"bioinformatics":[140],"is":[141],"increasingly":[142],"advocated":[143],"rapid,":[145],"reliable,":[146],"cost-effective":[148],"mycological":[149],"analyses.":[150],"Improved":[151],"techniques":[153],"are":[154],"essential":[155],"meet":[157],"growing":[159],"demand":[160],"authentic":[162],"timely":[164],"research":[168]},"counts_by_year":[],"updated_date":"2026-10-07T09:51:55.459714","created_date":"2026-02-03T00:00:00"}
