{"id":"https://openalex.org/W6926537209","doi":"https://doi.org/10.25378/janelia.5520049","title":"MouseLight Neuron AA0002","display_name":"MouseLight Neuron AA0002","publication_year":2017,"publication_date":"2017-01-01","ids":{"openalex":"https://openalex.org/W6926537209","doi":"https://doi.org/10.25378/janelia.5520049"},"language":"en","primary_location":{"id":"pmh:oai:figshare.com:article/5520049","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/MouseLight_Neuron_AA0002/5520049","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"volume":null,"type":"dataset","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://figshare.com/articles/dataset/MouseLight_Neuron_AA0002/5520049","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5036815034","display_name":"Jayaram V. Chandrashekar","orcid":"https://orcid.org/0000-0001-6412-0114","observed_orcids":["https://orcid.org/0000-0001-6412-0114"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Chandrashekar, Jayaram","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":null,"display_name":"MouseLight Project Team","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"MouseLight Project Team","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":true,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.6362000107765198,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.6362000107765198,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10077","display_name":"Neuroscience and Neuropharmacology Research","score":0.0917000025510788,"subfield":{"id":"https://openalex.org/subfields/2804","display_name":"Cellular and Molecular Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11601","display_name":"Neuroscience and Neural Engineering","score":0.03849999979138374,"subfield":{"id":"https://openalex.org/subfields/2804","display_name":"Cellular and Molecular Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/neuron-reconstruction","display_name":"neuron reconstruction","score":0.5289999842643738},{"id":"https://openalex.org/keywords/mouse-brain","display_name":"mouse brain","score":0.7689999938011169},{"id":"https://openalex.org/keywords/neuronal-tracing","display_name":"neural tracing","score":0.6489999890327454},{"id":"https://openalex.org/keywords/axonal-projections","display_name":"axonal projections","score":0.5730000138282776},{"id":"https://openalex.org/keywords/dendritic-branching","display_name":"dendritic branching","score":0.5699999928474426},{"id":"https://openalex.org/keywords/whole-brain-neuron-mapping","display_name":"whole-brain neuron mapping","score":0.5649999976158142},{"id":"https://openalex.org/keywords/two-photon-microscopy","display_name":"two-photon microscopy","score":0.75},{"id":"https://openalex.org/keywords/3d-neuron-visualization","display_name":"3D neuron visualization","score":0.5740000009536743},{"id":"https://openalex.org/keywords/neuronbrowser","display_name":"NeuronBrowser","score":0.640999972820282}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6729999780654907},{"id":"https://openalex.org/C138673069","wikidata":"https://www.wikidata.org/wiki/Q322229","display_name":"Tracing","level":2,"score":0.5899999737739563},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.535099983215332},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.508899986743927},{"id":"https://openalex.org/C2778794669","wikidata":"https://www.wikidata.org/wiki/Q43054","display_name":"Neuron","level":2,"score":0.5047000050544739},{"id":"https://openalex.org/C199683683","wikidata":"https://www.wikidata.org/wiki/Q8799","display_name":"Terabyte","level":2,"score":0.46470001339912415},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4226999878883362},{"id":"https://openalex.org/C75291252","wikidata":"https://www.wikidata.org/wiki/Q1315756","display_name":"TRACE (psycholinguistics)","level":2,"score":0.4077000021934509},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.385699987411499},{"id":"https://openalex.org/C2777735758","wikidata":"https://www.wikidata.org/wiki/Q817765","display_name":"Path (computing)","level":2,"score":0.3799999952316284},{"id":"https://openalex.org/C198082294","wikidata":"https://www.wikidata.org/wiki/Q3399648","display_name":"Position (finance)","level":2,"score":0.3682999908924103},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.35989999771118164},{"id":"https://openalex.org/C2780196419","wikidata":"https://www.wikidata.org/wiki/Q1762173","display_name":"Nerve net","level":2,"score":0.3375999927520752},{"id":"https://openalex.org/C58489278","wikidata":"https://www.wikidata.org/wiki/Q1172284","display_name":"Data set","level":2,"score":0.335099995136261},{"id":"https://openalex.org/C2779097318","wikidata":"https://www.wikidata.org/wiki/Q2993446","display_name":"Connectomics","level":4,"score":0.3296999931335449},{"id":"https://openalex.org/C206175624","wikidata":"https://www.wikidata.org/wiki/Q595731","display_name":"Branching (polymer chemistry)","level":2,"score":0.3075999915599823},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3057999908924103},{"id":"https://openalex.org/C77637269","wikidata":"https://www.wikidata.org/wiki/Q7002051","display_name":"Neural coding","level":2,"score":0.2996000051498413},{"id":"https://openalex.org/C545706735","wikidata":"https://www.wikidata.org/wiki/Q9404","display_name":"Nervous system","level":2,"score":0.2939000129699707},{"id":"https://openalex.org/C2984127161","wikidata":"https://www.wikidata.org/wiki/Q969316","display_name":"Neural activity","level":2,"score":0.2930000126361847},{"id":"https://openalex.org/C205427263","wikidata":"https://www.wikidata.org/wiki/Q1931480","display_name":"Neuroinformatics","level":2,"score":0.28290000557899475},{"id":"https://openalex.org/C118403218","wikidata":"https://www.wikidata.org/wiki/Q43283","display_name":"Biological neural network","level":2,"score":0.2750000059604645},{"id":"https://openalex.org/C50231774","wikidata":"https://www.wikidata.org/wiki/Q639842","display_name":"Brain mapping","level":2,"score":0.26570001244544983},{"id":"https://openalex.org/C12713177","wikidata":"https://www.wikidata.org/wiki/Q1900281","display_name":"Perspective (graphical)","level":2,"score":0.26249998807907104},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.25609999895095825},{"id":"https://openalex.org/C35304755","wikidata":"https://www.wikidata.org/wiki/Q255362","display_name":"Wiring diagram","level":2,"score":0.2526000142097473},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.251800000667572}],"mesh":[],"locations_count":4,"locations":[{"id":"pmh:oai:figshare.com:article/5520049","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/MouseLight_Neuron_AA0002/5520049","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"doi:10.25378/janelia.5520049","doi":"https://doi.org/10.25378/janelia.5520049","is_oa":true,"landing_page_url":"https://doi.org/10.25378/janelia.5520049","pdf_url":null,"source":{"id":"https://openalex.org/S7407051657","display_name":"Janelia Research Repository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1344073410","host_organization_name":"Howard Hughes Medical Institute","host_organization_lineage":["https://openalex.org/I1344073410"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},{"id":"doi:10.25378/janelia.5520049.v1","doi":"https://doi.org/10.25378/janelia.5520049.v1","is_oa":true,"landing_page_url":"https://doi.org/10.25378/janelia.5520049.v1","pdf_url":null,"source":{"id":"https://openalex.org/S7407051657","display_name":"Janelia Research Repository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1344073410","host_organization_name":"Howard Hughes Medical Institute","host_organization_lineage":["https://openalex.org/I1344073410"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},{"id":"doi:10.25378/janelia.5520049.v2","doi":"https://doi.org/10.25378/janelia.5520049.v2","is_oa":true,"landing_page_url":"https://doi.org/10.25378/janelia.5520049.v2","pdf_url":null,"source":{"id":"https://openalex.org/S7407051657","display_name":"Janelia Research Repository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1344073410","host_organization_name":"Howard Hughes Medical Institute","host_organization_lineage":["https://openalex.org/I1344073410"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"pmh:oai:figshare.com:article/5520049","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/MouseLight_Neuron_AA0002/5520049","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"sustainable_development_goals":[],"sustainable_development_goals_aurora":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W6964062064","https://openalex.org/W6889095779","https://openalex.org/W6889091069"],"abstract_inverted_index":{"A":[0],"vast":[1],"neural":[2,73],"tracing":[3],"effort":[4],"by":[5,22],"a":[6,23,143,150],"team":[7],"of":[8,15,25,82,95,99,114,161],"Janelia":[9,185],"scientists":[10],"has":[11],"upped":[12],"the":[13,19,33,39,78,91,100,105,112,121,172,178],"number":[14],"fully-traced":[16],"neurons":[17,43,103,116,125,146,166],"in":[18,35,75,77,104,120,128,139,177],"mouse":[20,40,83,106],"brain":[21,84,136,155],"factor":[24],"10.":[26],"Researchers":[27,175],"can":[28,55,67,168],"now":[29,53],"download":[30],"and":[31,69,93,142,152],"browse":[32],"data":[34,181],"three":[36],"dimensions.":[37],"Inside":[38],"brain,":[41],"individual":[42,115],"zigzag":[44],"across":[45],"hemispheres,":[46],"embroider":[47],"branching":[48],"patterns":[49],"and,":[50],"researchers":[51],"have":[52],"discovered,":[54],"even":[56],"spool":[57],"out":[58,119],"spindly":[59],"fibers":[60],"up":[61],"to":[62,110,186],"45":[63],"centimeters":[64],"long.":[65],"Scientists":[66],"see":[68],"explore":[70],"these":[71],"wandering":[72],"traces":[74],"3-D":[76],"most":[79],"detailed":[80],"map":[81,89],"wiring":[85],"yet":[86],"created.":[87],"The":[88,123,135],"reconstructs":[90],"shape":[92],"position":[94],"more":[96],"than":[97],"300":[98],"70":[101],"million":[102],"brain.":[107],"Previous":[108],"efforts":[109],"trace":[111],"path":[113],"had":[117],"topped":[118],"dozens.":[122],"selectively-labeled":[124],"were":[126],"mapped":[127,165],"an":[129],"iterative":[130],"process":[131],"with":[132],"two-photon":[133],"microscopy.":[134],"is":[137],"sliced":[138],"200-micron":[140],"sections":[141],"few":[144],"dozen":[145],"are":[147],"labeled":[148],"at":[149],"time":[151],"imaged.":[153],"Each":[154],"imaged":[156],"yields":[157],"about":[158],"50":[159],"terabytes":[160],"data,":[162],"each":[163],"containing":[164],"which":[167],"be":[169],"browsed":[170],"via":[171,190],"NeuronBrowser":[173],"application.":[174],"interested":[176],"complete":[179],"raw":[180],"set":[182],"should":[183],"contact":[184],"discuss":[187],"obtaining":[188],"it":[189],"hardware":[191],"transfer.":[192]},"counts_by_year":[],"updated_date":"2026-10-14T16:39:01.820549","created_date":"2025-10-10T00:00:00"}