{"id":"https://openalex.org/W65949560","doi":"https://doi.org/10.1385/1-59745-130-4:459","title":"Tomato (Lycopersicum esculentum)","display_name":"Tomato (Lycopersicum esculentum)","publication_year":2006,"publication_date":"2006-09-20","ids":{"openalex":"https://openalex.org/W65949560","doi":"https://doi.org/10.1385/1-59745-130-4:459","mag":"65949560","pmid":"https://pubmed.ncbi.nlm.nih.gov/16988368"},"language":"en","primary_location":{"id":"doi:10.1385/1-59745-130-4:459","doi":"https://doi.org/10.1385/1-59745-130-4:459","is_oa":false,"landing_page_url":"https://doi.org/10.1385/1-59745-130-4:459","pdf_url":null,"source":{"id":"https://openalex.org/S4306463399","display_name":"Humana Press eBooks","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/P4310315801","host_organization_name":"Humana Press","host_organization_lineage":["https://openalex.org/P4310315801","https://openalex.org/P4310319900"],"host_organization_lineage_names":["Humana Press","Springer Science+Business Media"],"type":"ebook platform"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Agrobacterium Protocols","raw_type":"book-chapter"},"volume":{"id":"https://openalex.org/W4211160565","display_name":"Agrobacterium Protocols"},"type":"book-chapter","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079543412","display_name":"Joyce M. Van Eck","orcid":"https://orcid.org/0000-0002-8005-365X","observed_orcids":["https://orcid.org/0000-0002-8005-365X"]},"institutions":[{"id":"https://openalex.org/I4405258788","display_name":"Boyce Thompson Institute","ror":"https://ror.org/016tr2327","country_code":"US","type":"facility","lineage":["https://openalex.org/I4405258788"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joyce Van Eck","raw_affiliation_strings":["The Boyce Thompson Institute for Plant Research, Inc., Ithaca, NY, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Boyce Thompson Institute for Plant Research, Inc., Ithaca, NY, USA","institution_ids":["https://openalex.org/I4405258788"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057615658","display_name":"Dwayne D. Kirk","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dwayne D. Kirk","raw_affiliation_strings":["University of Arizona"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Arizona","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5028062856","display_name":"Amanda Maree Walmsley","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Amanda M. Walmsley","raw_affiliation_strings":["University of Arizona"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Arizona","institution_ids":["https://openalex.org/I138006243"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":3.3395,"has_fulltext":false,"cited_by_count":94,"citation_normalized_percentile":{"value":0.91220015,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"343","issue":null,"first_page":"459","last_page":"474"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10240","display_name":"Plant tissue culture and regeneration","score":0.7139000296592712,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10240","display_name":"Plant tissue culture and regeneration","score":0.7139000296592712,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12856","display_name":"Transgenic Plants and Applications","score":0.28130000829696655,"subfield":{"id":"https://openalex.org/subfields/1305","display_name":"Biotechnology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11426","display_name":"Genetically Modified Organisms Research","score":0.0026000000070780516,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/tomato","display_name":"tomato","score":0.996999979019165},{"id":"https://openalex.org/keywords/agrobacterium-mediated-transformation","display_name":"Agrobacterium-mediated transformation","score":0.984000027179718},{"id":"https://openalex.org/keywords/cotyledon-explants","display_name":"cotyledon explants","score":0.9539999961853027},{"id":"https://openalex.org/keywords/transgenic-tomato","display_name":"transgenic tomato","score":0.550000011920929},{"id":"https://openalex.org/keywords/nuclear-transformation","display_name":"nuclear transformation","score":0.6140000224113464},{"id":"https://openalex.org/keywords/selectable-marker","display_name":"selectable marker","score":0.5559999942779541}],"concepts":[{"id":"https://openalex.org/C42411736","wikidata":"https://www.wikidata.org/wiki/Q1550327","display_name":"Selectable marker","level":4,"score":0.7283942699432373},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6321743726730347},{"id":"https://openalex.org/C137580998","wikidata":"https://www.wikidata.org/wiki/Q235352","display_name":"Crop","level":2,"score":0.6123512983322144},{"id":"https://openalex.org/C144027150","wikidata":"https://www.wikidata.org/wiki/Q48803","display_name":"Horticulture","level":1,"score":0.6008540987968445},{"id":"https://openalex.org/C197321923","wikidata":"https://www.wikidata.org/wiki/Q4886","display_name":"Cultivar","level":2,"score":0.5697771310806274},{"id":"https://openalex.org/C2777680332","wikidata":"https://www.wikidata.org/wiki/Q544652","display_name":"Lycopersicon","level":2,"score":0.5577839016914368},{"id":"https://openalex.org/C122172344","wikidata":"https://www.wikidata.org/wiki/Q1503477","display_name":"Genetically modified crops","level":4,"score":0.5560375452041626},{"id":"https://openalex.org/C157890192","wikidata":"https://www.wikidata.org/wiki/Q2561978","display_name":"Explant culture","level":3,"score":0.5489091873168945},{"id":"https://openalex.org/C102230213","wikidata":"https://www.wikidata.org/wiki/Q430117","display_name":"Transgene","level":3,"score":0.5026454925537109},{"id":"https://openalex.org/C37675176","wikidata":"https://www.wikidata.org/wiki/Q5532938","display_name":"Genetically modified tomato","level":5,"score":0.47831347584724426},{"id":"https://openalex.org/C204241405","wikidata":"https://www.wikidata.org/wiki/Q461499","display_name":"Transformation (genetics)","level":3,"score":0.46524322032928467},{"id":"https://openalex.org/C2779656422","wikidata":"https://www.wikidata.org/wiki/Q2700446","display_name":"Agrobacterium","level":4,"score":0.4105949401855469},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.376578152179718},{"id":"https://openalex.org/C150903083","wikidata":"https://www.wikidata.org/wiki/Q7108","display_name":"Biotechnology","level":1,"score":0.34644782543182373},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2812272608280182},{"id":"https://openalex.org/C6557445","wikidata":"https://www.wikidata.org/wiki/Q173113","display_name":"Agronomy","level":1,"score":0.27095019817352295},{"id":"https://openalex.org/C202751555","wikidata":"https://www.wikidata.org/wiki/Q221681","display_name":"In vitro","level":2,"score":0.0677739679813385},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.06131061911582947}],"mesh":[{"descriptor_ui":"D005819","descriptor_name":"Genetic Markers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016960","descriptor_name":"Agrobacterium tumefaciens","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D018014","descriptor_name":"Gene Transfer Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018548","descriptor_name":"Cotyledon","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D018548","descriptor_name":"Cotyledon","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D018551","descriptor_name":"Solanum lycopersicum","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D018551","descriptor_name":"Solanum lycopersicum","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D018551","descriptor_name":"Solanum lycopersicum","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D018551","descriptor_name":"Solanum lycopersicum","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D030821","descriptor_name":"Plants, Genetically Modified","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D030821","descriptor_name":"Plants, Genetically Modified","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D030821","descriptor_name":"Plants, Genetically Modified","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D030821","descriptor_name":"Plants, Genetically Modified","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1385/1-59745-130-4:459","doi":"https://doi.org/10.1385/1-59745-130-4:459","is_oa":false,"landing_page_url":"https://doi.org/10.1385/1-59745-130-4:459","pdf_url":null,"source":{"id":"https://openalex.org/S4306463399","display_name":"Humana Press eBooks","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/P4310315801","host_organization_name":"Humana Press","host_organization_lineage":["https://openalex.org/P4310315801","https://openalex.org/P4310319900"],"host_organization_lineage_names":["Humana Press","Springer Science+Business Media"],"type":"ebook platform"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Agrobacterium Protocols","raw_type":"book-chapter"},{"id":"pmid:16988368","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16988368","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Methods in molecular biology (Clifton, N.J.)","raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger","score":0.958299994468689}],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W63235121","https://openalex.org/W250739418","https://openalex.org/W612898390","https://openalex.org/W1204909788","https://openalex.org/W1553206412","https://openalex.org/W1993586413","https://openalex.org/W2025104339","https://openalex.org/W2034432330","https://openalex.org/W2052623167","https://openalex.org/W2056318351","https://openalex.org/W2059087130","https://openalex.org/W2059426511","https://openalex.org/W2082812076","https://openalex.org/W2114587202","https://openalex.org/W2132523913","https://openalex.org/W2136597148","https://openalex.org/W2267567042"],"related_works":["https://openalex.org/W75898314","https://openalex.org/W2358528976","https://openalex.org/W2911755154","https://openalex.org/W630015876","https://openalex.org/W214943664","https://openalex.org/W7125879736","https://openalex.org/W2417180561","https://openalex.org/W1817067","https://openalex.org/W2807555444","https://openalex.org/W7163538553"],"abstract_inverted_index":{"Tomato":[0],"(Lycopersicum":[1],"esculentum)":[2],"is":[3,28,44,56,60,88],"an":[4],"important":[5],"fruit":[6,49],"crop":[7],"in":[8,21],"the":[9,13,40,63,79,107],"Americas,":[10],"southern":[11],"Europe,":[12],"Middle":[14],"East,":[15],"and":[16,24,55,91,94,132,145],"India,":[17],"with":[18],"increasing":[19],"production":[20],"China,":[22],"Japan,":[23],"Southeast":[25],"Asia.":[26],"It":[27],"amenable":[29],"to":[30,67,119],"producing":[31],"pharmaceuticals,":[32],"particularly":[33],"for":[34,37,139],"oral":[35],"delivery;":[36],"many":[38],"of":[39,85,106,130,142],"same":[41],"reasons,":[42],"it":[43,59],"a":[45,82],"popular":[46],"vegetable.":[47],"Its":[48],"does":[50],"not":[51],"contain":[52],"toxic":[53],"substances":[54],"palatable":[57],"uncooked;":[58],"easily":[61,97],"processed;":[62],"plants":[64,80],"are":[65,96],"able":[66],"be":[68],"propagated":[69],"by":[70,74],"seed":[71],"or":[72,76],"clonally":[73],"tip":[75],"shoot":[77],"cuttings;":[78],"have":[81,115],"high":[83],"yield":[84],"fruit;":[86],"there":[87],"reasonable":[89],"biomass":[90],"protein":[92],"content;":[93],"they":[95],"grown":[98],"under":[99],"containment.":[100],"This":[101],"chapter":[102],"describes":[103],"Agrobacterium-mediated":[104],"transformation":[105],"tomato":[108,125,148],"nucleus":[109],"using":[110],"cotyledons":[111],"as":[112],"explants.":[113],"We":[114,135],"used":[116],"this":[117],"protocol":[118],"generate":[120],"transgenic":[121,143],"lines":[122,144],"from":[123],"several":[124],"cultivars":[126],"expressing":[127],"various":[128],"genes":[129],"interest":[131],"selectable":[133],"markers.":[134],"also":[136],"provide":[137],"protocols":[138],"molecular":[140],"characterization":[141],"batch":[146],"processing":[147],"fruit.":[149]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":13},{"year":2020,"cited_by_count":11},{"year":2019,"cited_by_count":8},{"year":2018,"cited_by_count":11},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":2}],"updated_date":"2026-11-03T10:50:19.383937","created_date":"2016-06-24T00:00:00"}
