{"id":"https://openalex.org/W639725237","doi":null,"title":"Atlantic forest fragmentation and genetic diversity of an isolated population of the Blue-manakin, Chiroxiphia caudata (Pipridae), assessed by microsatellite analyses","display_name":"Atlantic forest fragmentation and genetic diversity of an isolated population of the Blue-manakin, Chiroxiphia caudata (Pipridae), assessed by microsatellite analyses","publication_year":2013,"publication_date":"2013-09-04","ids":{"openalex":"https://openalex.org/W639725237","mag":"639725237"},"language":"en","primary_location":{"id":"pmh:oai:americanae.aecid.es:1723660","doi":null,"is_oa":true,"landing_page_url":"http://www.ararajuba.org.br/sbo/ararajuba/artigos/Volume141/volume141.htm","pdf_url":null,"source":{"id":"https://openalex.org/S4306400786","display_name":"Americanae (AECID Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"reponame:Reposit\u00f3rio Institucional da UNESP","raw_type":"info:eu-repo/semantics/article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":[],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"http://www.ararajuba.org.br/sbo/ararajuba/artigos/Volume141/volume141.htm","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5008337777","display_name":"Mercival R. Francisco","orcid":"https://orcid.org/0000-0003-2083-7812","observed_orcids":["https://orcid.org/0000-0003-2083-7812"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mercival R. Francisco","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0003-2083-7812","affiliations":[]},{"author_position":"middle","author":{"id":null,"display_name":"Mauro Galetti","orcid":"https://orcid.org/0000-0002-8187-8696","observed_orcids":["https://orcid.org/0000-0002-8187-8696"]},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Mauro Galetti","raw_affiliation_strings":["\u00a7Department of Anatomy, University of Cambridge"],"raw_orcid":"https://orcid.org/0000-0002-8187-8696","affiliations":[{"raw_affiliation_string":"\u00a7Department of Anatomy, University of Cambridge","institution_ids":["https://openalex.org/I241749"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5056033199","display_name":"Pedro Manoel Galetti","orcid":"https://orcid.org/0000-0001-5916-6126","observed_orcids":["https://orcid.org/0000-0001-5916-6126"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Pedro Manoel Galetti","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0001-5916-6126","affiliations":[]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":7,"citation_normalized_percentile":{"value":0.03514327,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":93,"max":95},"biblio":{"volume":"14","issue":"24","first_page":"8","last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10089","display_name":"Avian ecology and behavior","score":0.0,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10174","display_name":"Animal Behavior and Reproduction","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/chiroxiphia-caudata","display_name":"Chiroxiphia caudata","score":1.0},{"id":"https://openalex.org/keywords/genetic-diversity","display_name":"genetic diversity","score":0.8759999871253967},{"id":"https://openalex.org/keywords/population-structure","display_name":"population structure","score":0.6380000114440918},{"id":"https://openalex.org/keywords/gene-flow","display_name":"gene flow","score":0.5799999833106995},{"id":"https://openalex.org/keywords/inbreeding-depression","display_name":"inbreeding depression","score":0.7919999957084656},{"id":"https://openalex.org/keywords/genetic-drift","display_name":"genetic drift","score":0.9829999804496765},{"id":"https://openalex.org/keywords/heterozygosity","display_name":"heterozygosity","score":0.6480000019073486},{"id":"https://openalex.org/keywords/allelic-richness","display_name":"allelic richness","score":0.7099999785423279},{"id":"https://openalex.org/keywords/forest-fragments","display_name":"forest fragments","score":0.44600000977516174},{"id":"https://openalex.org/keywords/understory-birds","display_name":"understory birds","score":0.7979999780654907},{"id":"https://openalex.org/keywords/population-viability","display_name":"population viability","score":0.503000020980835}],"concepts":[{"id":"https://openalex.org/C61320498","wikidata":"https://www.wikidata.org/wiki/Q265193","display_name":"Microsatellite","level":4,"score":0.7649673819541931},{"id":"https://openalex.org/C2780214594","wikidata":"https://www.wikidata.org/wiki/Q28208678","display_name":"Caudata","level":2,"score":0.7487132549285889},{"id":"https://openalex.org/C81977670","wikidata":"https://www.wikidata.org/wiki/Q585259","display_name":"Genetic diversity","level":3,"score":0.7050827145576477},{"id":"https://openalex.org/C2992910246","wikidata":"https://www.wikidata.org/wiki/Q477047","display_name":"Atlantic forest","level":2,"score":0.6912934184074402},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.596925675868988},{"id":"https://openalex.org/C198979508","wikidata":"https://www.wikidata.org/wiki/Q913302","display_name":"Forest fragmentation","level":3,"score":0.4891965389251709},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.4792644679546356},{"id":"https://openalex.org/C191015642","wikidata":"https://www.wikidata.org/wiki/Q1132459","display_name":"Fragmentation (computing)","level":2,"score":0.4749695956707001},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.4363114833831787},{"id":"https://openalex.org/C85721925","wikidata":"https://www.wikidata.org/wiki/Q31151","display_name":"Population genetics","level":3,"score":0.43140125274658203},{"id":"https://openalex.org/C90856448","wikidata":"https://www.wikidata.org/wiki/Q431","display_name":"Zoology","level":1,"score":0.39860236644744873},{"id":"https://openalex.org/C185933670","wikidata":"https://www.wikidata.org/wiki/Q52105","display_name":"Habitat","level":2,"score":0.14592579007148743},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0683826208114624},{"id":"https://openalex.org/C180754005","wikidata":"https://www.wikidata.org/wiki/Q80726","display_name":"Allele","level":3,"score":0.06215858459472656},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.05771613121032715},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"pmh:oai:americanae.aecid.es:1723660","doi":null,"is_oa":true,"landing_page_url":"http://www.ararajuba.org.br/sbo/ararajuba/artigos/Volume141/volume141.htm","pdf_url":null,"source":{"id":"https://openalex.org/S4306400786","display_name":"Americanae (AECID Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"reponame:Reposit\u00f3rio Institucional da UNESP","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:repositorio.unesp.br:11449/68803","doi":null,"is_oa":true,"landing_page_url":"http://hdl.handle.net/11449/68803","pdf_url":"http://hdl.handle.net/11449/68803","source":{"id":"https://openalex.org/S4306402641","display_name":"LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Cient\u00edficas)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4383465926","host_organization_name":"LA Referencia","host_organization_lineage":["https://openalex.org/I4383465926"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"instacron:UNESP","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:acervodigital.unesp.br:11449/68803","doi":null,"is_oa":true,"landing_page_url":"http://hdl.handle.net/11449/68803","pdf_url":null,"source":{"id":"https://openalex.org/S4306400256","display_name":"Acervo Digital da Universidade Estadual Paulista (Universidade Estadual Paulista)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210115194","host_organization_name":"Funda\u00e7\u00e3o para o Desenvolvimento da UNESP","host_organization_lineage":["https://openalex.org/I4210115194"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"outro"},{"id":"mag:639725237","doi":null,"is_oa":false,"landing_page_url":"http://repositorio.unesp.br/handle/11449/68803","pdf_url":null,"source":{"id":"https://openalex.org/S2764759134","display_name":"Revista Brasileira de Ornitologia","issn_l":"2178-7867","issn":["2178-7867","2178-7875"],"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":"Revista Brasileira de Ornitologia","raw_type":null}],"best_oa_location":{"id":"pmh:oai:americanae.aecid.es:1723660","doi":null,"is_oa":true,"landing_page_url":"http://www.ararajuba.org.br/sbo/ararajuba/artigos/Volume141/volume141.htm","pdf_url":null,"source":{"id":"https://openalex.org/S4306400786","display_name":"Americanae (AECID Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"reponame:Reposit\u00f3rio Institucional da UNESP","raw_type":"info:eu-repo/semantics/article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/15","display_name":"Life on land","score":0.8518999814987183}],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320997","display_name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de S\u00e3o Paulo","ror":"https://ror.org/02ddkpn78"},{"id":"https://openalex.org/F4320322025","display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico","ror":"https://ror.org/03swz6y49"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W639725237.pdf","grobid_xml":"https://content.openalex.org/works/W639725237.grobid-xml"},"referenced_works_count":73,"referenced_works":["https://openalex.org/W173271883","https://openalex.org/W1587420391","https://openalex.org/W1832287255","https://openalex.org/W1843257233","https://openalex.org/W1906551997","https://openalex.org/W1964581499","https://openalex.org/W1969765837","https://openalex.org/W1983772767","https://openalex.org/W1983860911","https://openalex.org/W1996050606","https://openalex.org/W1997476591","https://openalex.org/W2005465578","https://openalex.org/W2014813076","https://openalex.org/W2015603300","https://openalex.org/W2017438896","https://openalex.org/W2020570763","https://openalex.org/W2021098202","https://openalex.org/W2027515295","https://openalex.org/W2035179731","https://openalex.org/W2035183036","https://openalex.org/W2035427448","https://openalex.org/W2038414255","https://openalex.org/W2039907346","https://openalex.org/W2046544690","https://openalex.org/W2053036630","https://openalex.org/W2062850146","https://openalex.org/W2066362596","https://openalex.org/W2069342214","https://openalex.org/W2071778234","https://openalex.org/W2089686893","https://openalex.org/W2092403998","https://openalex.org/W2106837814","https://openalex.org/W2110076538","https://openalex.org/W2112027830","https://openalex.org/W2112043029","https://openalex.org/W2112175944","https://openalex.org/W2112918500","https://openalex.org/W2121987671","https://openalex.org/W2122098453","https://openalex.org/W2122760250","https://openalex.org/W2132550267","https://openalex.org/W2133592332","https://openalex.org/W2135415321","https://openalex.org/W2136971540","https://openalex.org/W2139287674","https://openalex.org/W2147388777","https://openalex.org/W2148615142","https://openalex.org/W2148906030","https://openalex.org/W2159879533","https://openalex.org/W2161508474","https://openalex.org/W2162348455","https://openalex.org/W2168414965","https://openalex.org/W2170672592","https://openalex.org/W2175776900","https://openalex.org/W2253414912","https://openalex.org/W2312898377","https://openalex.org/W2314436504","https://openalex.org/W2315234506","https://openalex.org/W2317104000","https://openalex.org/W2319342244","https://openalex.org/W2321023417","https://openalex.org/W2324132055","https://openalex.org/W2324935043","https://openalex.org/W2326906660","https://openalex.org/W2335239777","https://openalex.org/W2417844502","https://openalex.org/W2489731271","https://openalex.org/W2622106978","https://openalex.org/W2737341189","https://openalex.org/W2797725190","https://openalex.org/W2802776805","https://openalex.org/W2900783381","https://openalex.org/W2990650386"],"related_works":["https://openalex.org/W4240212645","https://openalex.org/W2158740199","https://openalex.org/W7098138530","https://openalex.org/W194370554","https://openalex.org/W2111520908","https://openalex.org/W1975342665","https://openalex.org/W7095289608","https://openalex.org/W2050844651","https://openalex.org/W1971862711","https://openalex.org/W2625878907"],"abstract_inverted_index":{"Habitat":[0],"fragmentation":[1,258],"is":[2,178,208],"predicted":[3],"to":[4,142,159,166,193,243],"restrict":[5],"gene":[6],"flow,":[7],"which":[8,124],"can":[9,156],"result":[10],"in":[11,47,53,136,140,238],"the":[12,73,104,118,137,143,204,252,256],"loss":[13,27,114],"of":[14,28,68,103,183],"genetic":[15,66,122,174,211,222],"variation":[16],"and":[17,36,40,58,89,130,217,232],"inbreeding":[18,172],"depression.":[19],"The":[20],"Brazilian":[21],"Atlantic":[22,80],"forest":[23,81,95,257],"has":[24,133],"experienced":[25],"extensive":[26],"habitats":[29],"since":[30],"European":[31],"settlement":[32],"five":[33],"centuries":[34],"ago,":[35,88],"many":[37],"bird":[38],"populations":[39,49,227],"species":[41],"are":[42,241],"vanishing.":[43],"Genetic":[44],"variability":[45],"analysis":[46],"fragmented":[48],"could":[50],"be":[51,157,194],"important":[52],"determining":[54],"their":[55],"long-term":[56],"viability":[57],"for":[59,117,190,213],"guiding":[60],"management":[61],"plans.":[62],"Here":[63],"we":[64],"analyzed":[65],"diversity":[67],"a":[69,91,161,215,247],"small":[70,216],"understory":[71],"bird,":[72],"Blue-manakins":[74],"Chiroxiphia":[75],"caudata":[76],"(Pipridae),":[77],"from":[78,90,210,255],"an":[79],"fragment":[82,119,138,155],"(112":[83],"ha)":[84],"isolated":[85,218],"73":[86,181],"years":[87,182],"10,000":[92],"ha":[93,154],"continuous":[94,239],"tract":[96],"(control),":[97],"using":[98],"orthologous":[99],"microsatellite":[100],"loci.":[101],"Three":[102],"nine":[105],"loci":[106],"tested":[107],"were":[108],"polymorphic.":[109],"No":[110],"statistically":[111,148],"significant":[112],"heterozygote":[113],"was":[115,125,146,224,249],"detected":[116,225],"population.":[120,219],"Although":[121],"diversity,":[123],"estimated":[126],"by":[127,228,251,260],"expected":[128,209],"heterozygosity":[129],"allelic":[131,231],"richness,":[132],"been":[134,200],"lower":[135],"population":[139,163,262],"relation":[141],"control,":[144],"it":[145,177],"not":[147,186],"significant,":[149],"suggesting":[150],"that":[151,180],"this":[152],"112":[153],"sufficient":[158,188],"maintain":[160],"blue-manakin":[162],"large":[164],"enough":[165],"avoid":[167],"stochastic":[168],"effects,":[169],"such":[170,214,246],"as":[171],"and/or":[173],"drift.":[175],"Alternatively,":[176],"possible":[179],"isolation":[184,253],"did":[185],"accumulate":[187],"generations":[189],"these":[191],"effects":[192],"detected.":[195],"However,":[196],"some":[197],"alleles":[198],"have":[199],"likely":[201,242],"lost,":[202],"specially":[203],"rare":[205],"ones,":[206],"what":[207],"drift":[212],"A":[220],"high":[221],"differentiation":[223],"between":[226],"comparing":[229],"both":[230],"genotypic":[233],"distributions.":[234],"Only":[235],"future":[236],"studies":[237],"areas":[240],"answer":[244],"if":[245],"structure":[248],"caused":[250],"resulted":[254],"or":[259],"natural":[261],"structure.":[263]},"counts_by_year":[{"year":2022,"cited_by_count":2}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}
