{"id":"https://openalex.org/W4416902132","doi":"https://doi.org/10.1158/1541-7786.30761866","title":"Supplementary Table 2 from Mapping the FOXA1 Interactome in ER+ Breast Cancer Cells Using Proximity Labeling Reveals Novel Interactions with the Orphan Nuclear Receptor NR2C2","display_name":"Supplementary Table 2 from Mapping the FOXA1 Interactome in ER+ Breast Cancer Cells Using Proximity Labeling Reveals Novel Interactions with the Orphan Nuclear Receptor NR2C2","publication_year":2025,"publication_date":"2025-12-02","ids":{"openalex":"https://openalex.org/W4416902132","doi":"https://doi.org/10.1158/1541-7786.30761866"},"language":"en","primary_location":{"id":"doi:10.1158/1541-7786.30761866","doi":"https://doi.org/10.1158/1541-7786.30761866","is_oa":true,"landing_page_url":"https://doi.org/10.1158/1541-7786.30761866","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"American Association for Cancer Research","raw_type":"posted-content"},"volume":null,"type":"supplementary-materials","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1158/1541-7786.30761866","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5019316117","display_name":"Rosemary N. Plagens","orcid":"https://orcid.org/0000-0001-5832-9501","observed_orcids":["https://orcid.org/0000-0001-5832-9501"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Rosemary N. Plagens","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0001-5832-9501","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047120078","display_name":"Carla R. Tirado","orcid":"https://orcid.org/0000-0001-6826-6436","observed_orcids":["https://orcid.org/0000-0001-6826-6436"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Carla S. Rodriguez Tirado","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0001-6826-6436","affiliations":[]},{"author_position":"middle","author":{"id":null,"display_name":"Shen Li","orcid":"https://orcid.org/0000-0003-2947-3787","observed_orcids":["https://orcid.org/0000-0003-2947-3787"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Shen Li","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0003-2947-3787","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045823393","display_name":"Natalia Maldonado-Vazquez","orcid":"https://orcid.org/0009-0000-3843-9498","observed_orcids":["https://orcid.org/0009-0000-3843-9498"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Natalia Maldonado-Vazquez","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0009-0000-3843-9498","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013394705","display_name":"Ingrid M. Montes\u2010Rodr\u00edguez","orcid":"https://orcid.org/0000-0002-3289-9597","observed_orcids":["https://orcid.org/0000-0002-3289-9597"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ingrid M. Montes-Rodriguez","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-3289-9597","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040859580","display_name":"Julie Dutil","orcid":"https://orcid.org/0000-0002-0313-6443","observed_orcids":["https://orcid.org/0000-0002-0313-6443"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Julie Dutil","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-0313-6443","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024694847","display_name":"Christine A. Mills","orcid":"https://orcid.org/0000-0003-0372-4154","observed_orcids":["https://orcid.org/0000-0003-0372-4154"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Christine A. Mills","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0003-0372-4154","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053713564","display_name":"Laura E. Herring","orcid":"https://orcid.org/0000-0003-4496-7312","observed_orcids":["https://orcid.org/0000-0003-4496-7312"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Laura E. Herring","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0003-4496-7312","affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5033307249","display_name":"Hector L. Franco","orcid":"https://orcid.org/0000-0001-9354-0679","observed_orcids":["https://orcid.org/0000-0001-9354-0679"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hector L. Franco","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0001-9354-0679","affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10756","display_name":"Estrogen and related hormone effects","score":0.41749998927116394,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10756","display_name":"Estrogen and related hormone effects","score":0.41749998927116394,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13127","display_name":"Biotin and Related Studies","score":0.3944999873638153,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.0494999997317791,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/foxa1","display_name":"FOXA1","score":0.9909999966621399},{"id":"https://openalex.org/keywords/nr2c2","display_name":"NR2C2","score":0.9890000224113464},{"id":"https://openalex.org/keywords/estrogen-receptor-positive-breast-cancer","display_name":"estrogen receptor-positive breast cancer","score":0.8320000171661377},{"id":"https://openalex.org/keywords/protein-protein-interaction","display_name":"protein-protein interaction","score":0.8410000205039978},{"id":"https://openalex.org/keywords/orphan-nuclear-receptor","display_name":"orphan nuclear receptor","score":0.7519999742507935},{"id":"https://openalex.org/keywords/chip-seq","display_name":"ChIP-seq","score":0.7210000157356262},{"id":"https://openalex.org/keywords/proximity-labeling","display_name":"proximity labeling","score":0.4959999918937683},{"id":"https://openalex.org/keywords/transcription-factor-binding-sites","display_name":"transcription factor binding sites","score":0.6079999804496765},{"id":"https://openalex.org/keywords/gene-regulatory-interactions","display_name":"gene regulatory interactions","score":0.3659999966621399}],"concepts":[{"id":"https://openalex.org/C154456304","wikidata":"https://www.wikidata.org/wiki/Q18027046","display_name":"FOXA1","level":4,"score":0.8996000289916992},{"id":"https://openalex.org/C9760119","wikidata":"https://www.wikidata.org/wiki/Q841382","display_name":"Interactome","level":3,"score":0.7990000247955322},{"id":"https://openalex.org/C45235069","wikidata":"https://www.wikidata.org/wiki/Q278425","display_name":"Table (database)","level":2,"score":0.5685999989509583},{"id":"https://openalex.org/C530470458","wikidata":"https://www.wikidata.org/wiki/Q128581","display_name":"Breast cancer","level":3,"score":0.5569000244140625},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5461000204086304},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4431999921798706},{"id":"https://openalex.org/C63932345","wikidata":"https://www.wikidata.org/wiki/Q422500","display_name":"Nuclear receptor","level":4,"score":0.4392000138759613},{"id":"https://openalex.org/C2994423619","wikidata":"https://www.wikidata.org/wiki/Q9103","display_name":"Human breast","level":4,"score":0.4207000136375427},{"id":"https://openalex.org/C2779161069","wikidata":"https://www.wikidata.org/wiki/Q2496179","display_name":"Orphan receptor","level":4,"score":0.3765999972820282},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.37209999561309814},{"id":"https://openalex.org/C2910080358","wikidata":"https://www.wikidata.org/wiki/Q416496","display_name":"Oestrogen receptor","level":4,"score":0.34549999237060547},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3312000036239624},{"id":"https://openalex.org/C502942594","wikidata":"https://www.wikidata.org/wiki/Q3421914","display_name":"Cancer research","level":1,"score":0.30970001220703125},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.28619998693466187},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.27970001101493835},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.2712000012397766},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.2639999985694885},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.26339998841285706},{"id":"https://openalex.org/C96232424","wikidata":"https://www.wikidata.org/wiki/Q4118072","display_name":"Cancer cell","level":3,"score":0.2563000023365021}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1158/1541-7786.30761866","doi":"https://doi.org/10.1158/1541-7786.30761866","is_oa":true,"landing_page_url":"https://doi.org/10.1158/1541-7786.30761866","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"American Association for Cancer Research","raw_type":"posted-content"},{"id":"pmh:oai:figshare.com:article/30761866","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Supplementary_Table_2_from_Mapping_the_FOXA1_Interactome_in_ER_sup_sup_Breast_Cancer_Cells_Using_Proximity_Labeling_Reveals_Novel_Interactions_with_the_Orphan_Nuclear_Receptor_NR2C2/30761866","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"doi:10.1158/1541-7786.30761866","doi":"https://doi.org/10.1158/1541-7786.30761866","is_oa":true,"landing_page_url":"https://doi.org/10.1158/1541-7786.30761866","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"American Association for Cancer Research","raw_type":"posted-content"},"sustainable_development_goals":[{"score":0.5683000087738037,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4416902114","https://openalex.org/W4413789089","https://openalex.org/W4362308998","https://openalex.org/W4322771648","https://openalex.org/W4362309468","https://openalex.org/W4362300067","https://openalex.org/W3011390508","https://openalex.org/W7097139082","https://openalex.org/W2976711012","https://openalex.org/W6944301146"],"abstract_inverted_index":{"Full":[0],"NR2C2":[1],"ChIP-seq":[2],"analysis":[3,8],"table,":[4],"including":[5],"full":[6],"DiffBind":[7],"(with":[9],"ns":[10],"retained),":[11],"macs2":[12],"scores,":[13],"ChIPseeker":[14],"annotations,":[15],"and":[16],"`bedtools":[17],"closest`":[18],"distances":[19],"to":[20],"FOXA1":[21],"peaks":[22],"(CSV":[23],"file).":[24]},"counts_by_year":[],"updated_date":"2026-10-28T10:33:24.094632","created_date":"2025-12-02T00:00:00"}