{"id":"https://openalex.org/W4416630055","doi":"https://doi.org/10.1186/s12917-025-05143-7","title":"Fine-scale assessment of ROH patterns and genomic inbreeding in diverse horse breeds using two SNP array densities","display_name":"Fine-scale assessment of ROH patterns and genomic inbreeding in diverse horse breeds using two SNP array densities","publication_year":2025,"publication_date":"2025-11-25","ids":{"openalex":"https://openalex.org/W4416630055","doi":"https://doi.org/10.1186/s12917-025-05143-7","pmid":"https://pubmed.ncbi.nlm.nih.gov/41291721"},"language":"en","primary_location":{"id":"doi:10.1186/s12917-025-05143-7","doi":"https://doi.org/10.1186/s12917-025-05143-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12917-025-05143-7","pdf_url":"https://link.springer.com/content/pdf/10.1186/s12917-025-05143-7.pdf","source":{"id":"https://openalex.org/S197820984","display_name":"BMC Veterinary Research","issn_l":"1746-6148","issn":["1746-6148"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","jufo-1","ki-jl-1","medline","norway-2"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Veterinary Research","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://link.springer.com/content/pdf/10.1186/s12917-025-05143-7.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5012887373","display_name":"Moslem Moghbeli Damane","orcid":"https://orcid.org/0000-0002-1853-8103","observed_orcids":["https://orcid.org/0000-0002-1853-8103"]},"institutions":[{"id":"https://openalex.org/I115566878","display_name":"Shahid Bahonar University of Kerman","ror":"https://ror.org/04zn42r77","country_code":"IR","type":"education","lineage":["https://openalex.org/I115566878"]}],"countries":["IR"],"is_corresponding":true,"raw_author_name":"Moslem Moghbeli Damane","raw_affiliation_strings":["Department of Animal Science, Faculty of Agriculture, Shahid Bahonar University of Kerman, Kerman, Iran. m.moghbeli@agr.uk.ac.ir","Department of Animal Science, Faculty of Agriculture, Shahid Bahonar University of Kerman, Kerman, Iran"],"raw_orcid":"https://orcid.org/0000-0002-1853-8103","affiliations":[{"raw_affiliation_string":"Department of Animal Science, Faculty of Agriculture, Shahid Bahonar University of Kerman, Kerman, Iran. m.moghbeli@agr.uk.ac.ir","institution_ids":["https://openalex.org/I115566878"]},{"raw_affiliation_string":"Department of Animal Science, Faculty of Agriculture, Shahid Bahonar University of Kerman, Kerman, Iran","institution_ids":["https://openalex.org/I115566878"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086870397","display_name":"Ahmad Ayatollahi Mehrgardi","orcid":"https://orcid.org/0000-0001-5278-8459","observed_orcids":["https://orcid.org/0000-0001-5278-8459","https://orcid.org/0000-0001-7698-063X"]},"institutions":[{"id":"https://openalex.org/I115566878","display_name":"Shahid Bahonar University of Kerman","ror":"https://ror.org/04zn42r77","country_code":"IR","type":"education","lineage":["https://openalex.org/I115566878"]}],"countries":["IR"],"is_corresponding":true,"raw_author_name":"Ahmad Ayatollahi Mehrgardi","raw_affiliation_strings":["Department of Animal Science, Faculty of Agriculture, Shahid Bahonar University of Kerman, Kerman, Iran. mehrgardi@uk.ac.ir","Department of Animal Science, Faculty of Agriculture, Shahid Bahonar University of Kerman, Kerman, Iran"],"raw_orcid":"https://orcid.org/0000-0001-5278-8459","affiliations":[{"raw_affiliation_string":"Department of Animal Science, Faculty of Agriculture, Shahid Bahonar University of Kerman, Kerman, Iran. mehrgardi@uk.ac.ir","institution_ids":["https://openalex.org/I115566878"]},{"raw_affiliation_string":"Department of Animal Science, Faculty of Agriculture, Shahid Bahonar University of Kerman, Kerman, Iran","institution_ids":["https://openalex.org/I115566878"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039959167","display_name":"Ali Esmailizadeh","orcid":"https://orcid.org/0000-0003-0986-6639","observed_orcids":["https://orcid.org/0000-0003-0986-6639"]},"institutions":[{"id":"https://openalex.org/I115566878","display_name":"Shahid Bahonar University of Kerman","ror":"https://ror.org/04zn42r77","country_code":"IR","type":"education","lineage":["https://openalex.org/I115566878"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Ali Esmailizadeh","raw_affiliation_strings":["Department of Animal Science, Faculty of Agriculture, Shahid Bahonar University of Kerman, Kerman, Iran"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Animal Science, Faculty of Agriculture, Shahid Bahonar University of Kerman, Kerman, Iran","institution_ids":["https://openalex.org/I115566878"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5088605177","display_name":"Mehdi M. Momen","orcid":"https://orcid.org/0000-0002-2562-2741","observed_orcids":["https://orcid.org/0000-0002-2562-2741"]},"institutions":[{"id":"https://openalex.org/I135310074","display_name":"University of Wisconsin\u2013Madison","ror":"https://ror.org/01y2jtd41","country_code":"US","type":"education","lineage":["https://openalex.org/I135310074"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mehdi Momen","raw_affiliation_strings":["Department of Surgical Sciences, School of Veterinary Medicine, University of Wisconsin- Madison, Madison, WI, 53706, USA"],"raw_orcid":"https://orcid.org/0000-0002-2562-2741","affiliations":[{"raw_affiliation_string":"Department of Surgical Sciences, School of Veterinary Medicine, University of Wisconsin- Madison, Madison, WI, 53706, USA","institution_ids":["https://openalex.org/I135310074"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5012887373","https://openalex.org/A5086870397"],"corresponding_institution_ids":["https://openalex.org/I115566878"],"apc_list":{"value":3190,"currency":"USD","value_usd":3190},"apc_paid":{"value":3190,"currency":"USD","value_usd":3190},"fwci":1.1037,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.79240375,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":97},"biblio":{"volume":"21","issue":"1","first_page":"688","last_page":"688"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10594","display_name":"Genetic and phenotypic traits in livestock","score":0.9814000129699707,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10594","display_name":"Genetic and phenotypic traits in livestock","score":0.9814000129699707,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10872","display_name":"Veterinary Equine Medical Research","score":0.00839999970048666,"subfield":{"id":"https://openalex.org/subfields/3402","display_name":"Equine"},"field":{"id":"https://openalex.org/fields/34","display_name":"Veterinary"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.005400000140070915,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/runs-of-homozygosity","display_name":"runs of homozygosity","score":0.9869999885559082},{"id":"https://openalex.org/keywords/genomic-inbreeding","display_name":"genomic inbreeding","score":0.9470000267028809},{"id":"https://openalex.org/keywords/horse-breeds","display_name":"horse breeds","score":0.7310000061988831},{"id":"https://openalex.org/keywords/autozygosity","display_name":"autozygosity","score":0.7990000247955322},{"id":"https://openalex.org/keywords/roh-islands","display_name":"ROH islands","score":0.8309999704360962},{"id":"https://openalex.org/keywords/genetic-diversity","display_name":"genetic diversity","score":0.6480000019073486},{"id":"https://openalex.org/keywords/breeding-strategies","display_name":"breeding strategies","score":0.4580000042915344},{"id":"https://openalex.org/keywords/signatures-of-selection","display_name":"selection signatures","score":0.36500000953674316}],"concepts":[{"id":"https://openalex.org/C2776116246","wikidata":"https://www.wikidata.org/wiki/Q21067469","display_name":"Runs of Homozygosity","level":5,"score":0.9114000201225281},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8147000074386597},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.6816999912261963},{"id":"https://openalex.org/C2777782036","wikidata":"https://www.wikidata.org/wiki/Q38978","display_name":"Inbreeding","level":3,"score":0.6388999819755554},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.6050999760627747},{"id":"https://openalex.org/C139275648","wikidata":"https://www.wikidata.org/wiki/Q17134011","display_name":"SNP","level":5,"score":0.5698000192642212},{"id":"https://openalex.org/C122060243","wikidata":"https://www.wikidata.org/wiki/Q7391885","display_name":"SNP array","level":5,"score":0.4320000112056732},{"id":"https://openalex.org/C2992444039","wikidata":"https://www.wikidata.org/wiki/Q17145598","display_name":"Genomic selection","level":5,"score":0.4309000074863434},{"id":"https://openalex.org/C163691529","wikidata":"https://www.wikidata.org/wiki/Q7391886","display_name":"SNP genotyping","level":5,"score":0.42250001430511475},{"id":"https://openalex.org/C17757408","wikidata":"https://www.wikidata.org/wiki/Q4135516","display_name":"genomic DNA","level":3,"score":0.3878999948501587},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.3813000023365021},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.365200012922287},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.3621000051498413},{"id":"https://openalex.org/C197754878","wikidata":"https://www.wikidata.org/wiki/Q80711","display_name":"Haplotype","level":4,"score":0.34389999508857727},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3343000113964081},{"id":"https://openalex.org/C81977670","wikidata":"https://www.wikidata.org/wiki/Q585259","display_name":"Genetic diversity","level":3,"score":0.3294999897480011},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.29339998960494995},{"id":"https://openalex.org/C68873052","wikidata":"https://www.wikidata.org/wiki/Q349856","display_name":"Genetic variation","level":3,"score":0.2922999858856201},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.2851000130176544},{"id":"https://openalex.org/C106208931","wikidata":"https://www.wikidata.org/wiki/Q1098876","display_name":"Genome-wide association study","level":5,"score":0.2799000144004822},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.2784999907016754},{"id":"https://openalex.org/C2780762169","wikidata":"https://www.wikidata.org/wiki/Q5905368","display_name":"Horse","level":2,"score":0.2694000005722046}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006720","descriptor_name":"Homozygote","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006720","descriptor_name":"Homozygote","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006720","descriptor_name":"Homozygote","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006736","descriptor_name":"Horses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006736","descriptor_name":"Horses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006736","descriptor_name":"Horses","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D007178","descriptor_name":"Inbreeding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007178","descriptor_name":"Inbreeding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007178","descriptor_name":"Inbreeding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1186/s12917-025-05143-7","doi":"https://doi.org/10.1186/s12917-025-05143-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12917-025-05143-7","pdf_url":"https://link.springer.com/content/pdf/10.1186/s12917-025-05143-7.pdf","source":{"id":"https://openalex.org/S197820984","display_name":"BMC Veterinary Research","issn_l":"1746-6148","issn":["1746-6148"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","jufo-1","ki-jl-1","medline","norway-2"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Veterinary Research","raw_type":"journal-article"},{"id":"pmid:41291721","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41291721","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC veterinary research","raw_type":"Journal Article"},{"id":"pmh:oai:doaj.org/article:c287b08e4b734bf48156d2bb5ed3a62a","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/c287b08e4b734bf48156d2bb5ed3a62a","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Veterinary Research, Vol 21, Iss 1, Pp 1-21 (2025)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s12917-025-05143-7","doi":"https://doi.org/10.1186/s12917-025-05143-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12917-025-05143-7","pdf_url":"https://link.springer.com/content/pdf/10.1186/s12917-025-05143-7.pdf","source":{"id":"https://openalex.org/S197820984","display_name":"BMC Veterinary Research","issn_l":"1746-6148","issn":["1746-6148"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","jufo-1","ki-jl-1","medline","norway-2"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Veterinary Research","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger","score":0.5666999816894531}],"sustainable_development_goals_aurora":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4416630055.pdf","grobid_xml":"https://content.openalex.org/works/W4416630055.grobid-xml"},"referenced_works_count":46,"referenced_works":["https://openalex.org/W165775377","https://openalex.org/W1952575170","https://openalex.org/W1977597564","https://openalex.org/W1999485160","https://openalex.org/W2011310028","https://openalex.org/W2029395646","https://openalex.org/W2034152653","https://openalex.org/W2054425553","https://openalex.org/W2065035179","https://openalex.org/W2089528964","https://openalex.org/W2099085143","https://openalex.org/W2134206074","https://openalex.org/W2137073429","https://openalex.org/W2138863022","https://openalex.org/W2140247198","https://openalex.org/W2148519154","https://openalex.org/W2153362877","https://openalex.org/W2160021193","https://openalex.org/W2162952376","https://openalex.org/W2167651190","https://openalex.org/W2335363907","https://openalex.org/W2559013477","https://openalex.org/W2610745179","https://openalex.org/W2739718326","https://openalex.org/W2778638641","https://openalex.org/W2783619038","https://openalex.org/W2784309373","https://openalex.org/W2897178327","https://openalex.org/W2952113787","https://openalex.org/W2952582518","https://openalex.org/W3014042482","https://openalex.org/W3087282750","https://openalex.org/W3134073347","https://openalex.org/W4213088408","https://openalex.org/W4220831425","https://openalex.org/W4285041205","https://openalex.org/W4310197312","https://openalex.org/W4311069864","https://openalex.org/W4378983587","https://openalex.org/W4379600856","https://openalex.org/W4380319970","https://openalex.org/W4392456056","https://openalex.org/W4409219681","https://openalex.org/W4410451921","https://openalex.org/W6929575514","https://openalex.org/W6929662536"],"related_works":[],"abstract_inverted_index":{"Inbreeding":[0],"is":[1,9,22,40,73],"caused":[2,23],"by":[3,24],"mating":[4],"between":[5],"related":[6],"individuals":[7],"and":[8,14,28,44,54,71,93,102,117,130,141,152,164,182,194,200,213,221,242,267,277,289,317,334,346,354],"associated":[10,326],"with":[11,299,327],"reduced":[12],"fitness":[13],"performance.":[15,335],"Generally,":[16],"in":[17,157,189],"the":[18,56,63,75,109,161,173,191,201,218,237,246],"horse":[19,124],"population,":[20],"inbreeding":[21,39,70,115,251,263],"geographically":[25],"restricted":[26],"areas":[27],"intensive":[29],"natural":[30],"or":[31],"artificial":[32],"selection.":[33,103],"For":[34],"this":[35,105],"reason,":[36],"assessing":[37,68],"accurate":[38,65],"essential":[41],"for":[42,67,160,190,217,236,245,286,351],"developing":[43],"implementing":[45],"effective":[46],"breeding":[47],"strategies":[48],"aimed":[49],"at":[50],"preserving":[51],"genetic":[52],"diversity":[53],"reducing":[55],"harmful":[57],"consequences":[58],"of":[59,62,77,79,86,111,150,172,205,342],"inbreeding.":[60],"One":[61],"most":[64],"approaches":[66],"genomic":[69,114,297,340],"autozygosity":[72],"through":[74],"analysis":[76],"runs":[78],"homozygosity":[80],"(ROH),":[81],"which":[82],"are":[83],"long":[84],"stretches":[85],"homozygous":[87],"genotypes":[88],"inherited":[89],"from":[90,138,144,269,278],"common":[91],"ancestors":[92],"provide":[94],"valuable":[95],"insights":[96],"into":[97],"population":[98],"diversity,":[99],"demographic":[100],"history,":[101],"In":[104],"study,":[106],"we":[107],"analyzed":[108],"distribution":[110],"ROH,":[112],"estimated":[113],"coefficients,":[116],"mapped":[118],"ROH":[119,229,254,256,301,305,321,337],"islands":[120,306,322,338],"across":[121],"14":[122],"diverse":[123],"breeds.":[125],"We":[126,295],"used":[127],"670":[128,162,192,219,238,287],"K":[129,163,193,220,239,288],"MNEc2M":[131,165,195,222,247,290],"SNP":[132,166,196,223,240,248,291],"array":[133,167,197,224,241,292],"datasets,":[134,168,198,225,293],"comprising":[135],"279,040":[136],"SNPs":[137,143],"424":[139],"horses":[140],"1,083,942":[142],"438":[145],"horses,":[146],"respectively.":[147,169,226,294],"A":[148],"total":[149,203],"35,396":[151],"17,382":[153],"ROHs":[154,175,206],"were":[155,176,184,209],"detected":[156,174],"all":[158],"breeds":[159],"The":[170,227],"majority":[171],"<":[177],"16":[178,187],"Mb":[179,188,235,244],"(only":[180],"2.23%":[181],"1.38%":[183],"greater":[185],"than":[186,261],"respectively)":[199],"average":[202],"number":[204],"per":[207,231],"individual":[208,232],"81.36":[210],"\u00b1":[211,215,271,275,280,284],"33.38":[212],"38.71":[214],"22.73":[216],"mean":[228],"length":[230],"was":[233,258],"248.57":[234],"89.56":[243],"array.":[249],"Genomic":[250],"based":[252],"on":[253],"(F":[255,264],")":[257,266],"relatively":[259],"higher":[260],"homozygosity-based":[262],"HOM":[265],"ranged":[268],"0.0364":[270],"0.0049":[272],"to":[273,282],"0.2357":[274],"0.0584":[276],"0.004":[279],"0.0044":[281],"0.1102":[283],"0.0779":[285],"identified":[296],"regions":[298,350],"high":[300],"coverage":[302],"so":[303],"called":[304],"that":[307,323],"may":[308],"reflect":[309],"recent":[310],"selection":[311,344],"events.":[312],"Several":[313],"chromosomes,":[314],"including":[315],"ECA7":[316],"ECA11,":[318],"contained":[319],"large":[320],"include":[324],"genes":[325],"important":[328],"traits":[329],"such":[330],"as":[331,348],"pigmentation,":[332],"fertility,":[333],"These":[336],"represent":[339],"footprints":[341],"past":[343],"events":[345],"serve":[347],"candidate":[349],"future":[352],"functional":[353],"association":[355],"studies.":[356]},"counts_by_year":[{"year":2026,"cited_by_count":2}],"updated_date":"2026-09-24T07:57:37.273135","created_date":"2025-11-25T00:00:00"}
