{"id":"https://openalex.org/W4415414951","doi":"https://doi.org/10.22437/jmj.v13i1.38458","title":"Mycobacterium Tuberculosis Identification on Suspected Extra Pulmonary Tuberculosis Patients","display_name":"Mycobacterium Tuberculosis Identification on Suspected Extra Pulmonary Tuberculosis Patients","publication_year":2025,"publication_date":"2025-05-28","ids":{"openalex":"https://openalex.org/W4415414951","doi":"https://doi.org/10.22437/jmj.v13i1.38458"},"language":"en","primary_location":{"id":"doi:10.22437/jmj.v13i1.38458","doi":"https://doi.org/10.22437/jmj.v13i1.38458","is_oa":true,"landing_page_url":"https://doi.org/10.22437/jmj.v13i1.38458","pdf_url":"https://online-journal.unja.ac.id/kedokteran/article/download/38458/21895","source":{"id":"https://openalex.org/S4306514810","display_name":"JAMBI MEDICAL JOURNAL \"Jurnal Kedokteran dan Kesehatan\"","issn_l":"2339-269X","issn":["2339-269X","2580-6874"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Jambi Medical Journal : Jurnal Kedokteran dan Kesehatan","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://online-journal.unja.ac.id/kedokteran/article/download/38458/21895","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5091607502","display_name":"Lipinwati Lipinwati","orcid":"https://orcid.org/0000-0002-4110-4063","observed_orcids":["https://orcid.org/0000-0002-4110-4063"]},"institutions":[{"id":"https://openalex.org/I147791725","display_name":"Universitas Jambi","ror":"https://ror.org/00g1w3j30","country_code":"ID","type":"education","lineage":["https://openalex.org/I147791725"]}],"countries":["ID"],"is_corresponding":false,"raw_author_name":"Lipinwati Lipinwati","raw_affiliation_strings":["Universitas Jambi"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universitas Jambi","institution_ids":["https://openalex.org/I147791725"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087989261","display_name":"Hanina Hanina","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I147791725","display_name":"Universitas Jambi","ror":"https://ror.org/00g1w3j30","country_code":"ID","type":"education","lineage":["https://openalex.org/I147791725"]}],"countries":["ID"],"is_corresponding":false,"raw_author_name":"Hanina Hanina","raw_affiliation_strings":["Universitas Jambi"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universitas Jambi","institution_ids":["https://openalex.org/I147791725"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Putri Sari Wulandari","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I147791725","display_name":"Universitas Jambi","ror":"https://ror.org/00g1w3j30","country_code":"ID","type":"education","lineage":["https://openalex.org/I147791725"]}],"countries":["ID"],"is_corresponding":false,"raw_author_name":"Putri Sari Wulandari","raw_affiliation_strings":["Universitas Jambi"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universitas Jambi","institution_ids":["https://openalex.org/I147791725"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029130990","display_name":"Mirna Marhami Iskandar","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I147791725","display_name":"Universitas Jambi","ror":"https://ror.org/00g1w3j30","country_code":"ID","type":"education","lineage":["https://openalex.org/I147791725"]}],"countries":["ID"],"is_corresponding":false,"raw_author_name":"Mirna Marhami Iskandar","raw_affiliation_strings":["Universitas Jambi"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universitas Jambi","institution_ids":["https://openalex.org/I147791725"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068332152","display_name":"Attiya Istarini","orcid":"https://orcid.org/0000-0002-9060-7740","observed_orcids":["https://orcid.org/0000-0002-9060-7740"]},"institutions":[{"id":"https://openalex.org/I147791725","display_name":"Universitas Jambi","ror":"https://ror.org/00g1w3j30","country_code":"ID","type":"education","lineage":["https://openalex.org/I147791725"]}],"countries":["ID"],"is_corresponding":false,"raw_author_name":"Attiya Istarini","raw_affiliation_strings":["Universitas Jambi"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universitas Jambi","institution_ids":["https://openalex.org/I147791725"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Melly Miranda","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Melly Miranda","raw_affiliation_strings":["Raden Mattaher Hospital, Jambi, Indonesia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Raden Mattaher Hospital, Jambi, Indonesia","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011603780","display_name":"Hasna Dewi","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I147791725","display_name":"Universitas Jambi","ror":"https://ror.org/00g1w3j30","country_code":"ID","type":"education","lineage":["https://openalex.org/I147791725"]}],"countries":["ID"],"is_corresponding":false,"raw_author_name":"Hasna Dewi","raw_affiliation_strings":["Universitas Jambi"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universitas Jambi","institution_ids":["https://openalex.org/I147791725"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033941772","display_name":"Rianita Juniati","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Rianita Juniati","raw_affiliation_strings":["Raden Mattaher Hospital, Jambi, Indonesia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Raden Mattaher Hospital, Jambi, Indonesia","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5067640521","display_name":"Fairuz Fairuz","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I147791725","display_name":"Universitas Jambi","ror":"https://ror.org/00g1w3j30","country_code":"ID","type":"education","lineage":["https://openalex.org/I147791725"]}],"countries":["ID"],"is_corresponding":false,"raw_author_name":"Fairuz Fairuz","raw_affiliation_strings":["Universitas Jambi"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universitas Jambi","institution_ids":["https://openalex.org/I147791725"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.5947,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.57905791,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":"13","issue":"1","first_page":"10","last_page":"15"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10038","display_name":"Tuberculosis Research and Epidemiology","score":0.9096999764442444,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10038","display_name":"Tuberculosis Research and Epidemiology","score":0.9096999764442444,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12578","display_name":"Diagnosis and treatment of tuberculosis","score":0.053700000047683716,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11316","display_name":"Mycobacterium research and diagnosis","score":0.016699999570846558,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/mycobacterium-tuberculosis","display_name":"Mycobacterium tuberculosis","score":0.8510000109672546},{"id":"https://openalex.org/keywords/extrapulmonary-tuberculosis","display_name":"extrapulmonary tuberculosis","score":0.859000027179718},{"id":"https://openalex.org/keywords/tuberculosis-diagnosis","display_name":"tuberculosis diagnosis","score":0.6579999923706055},{"id":"https://openalex.org/keywords/qpcr","display_name":"qPCR","score":0.6949999928474426},{"id":"https://openalex.org/keywords/is6110","display_name":"IS6110","score":0.8939999938011169},{"id":"https://openalex.org/keywords/formalin-fixed-paraffin-embedded-tissue","display_name":"formalin-fixed paraffin-embedded tissue","score":0.8149999976158142},{"id":"https://openalex.org/keywords/gastrointestinal-tuberculosis","display_name":"gastrointestinal tuberculosis","score":0.8209999799728394}],"concepts":[{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.9128999710083008},{"id":"https://openalex.org/C2781069245","wikidata":"https://www.wikidata.org/wiki/Q12204","display_name":"Tuberculosis","level":2,"score":0.7053999900817871},{"id":"https://openalex.org/C2777975735","wikidata":"https://www.wikidata.org/wiki/Q130971","display_name":"Mycobacterium tuberculosis","level":3,"score":0.6376000046730042},{"id":"https://openalex.org/C2779790121","wikidata":"https://www.wikidata.org/wiki/Q5779917","display_name":"Mycobacterium tuberculosis complex","level":4,"score":0.5522000193595886},{"id":"https://openalex.org/C2908628106","wikidata":"https://www.wikidata.org/wiki/Q12204","display_name":"Pulmonary tuberculosis","level":3,"score":0.5034000277519226},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.4043000042438507},{"id":"https://openalex.org/C2780374374","wikidata":"https://www.wikidata.org/wiki/Q194309","display_name":"Mycobacterium","level":3,"score":0.35920000076293945},{"id":"https://openalex.org/C49105822","wikidata":"https://www.wikidata.org/wiki/Q176996","display_name":"Polymerase chain reaction","level":3,"score":0.35109999775886536},{"id":"https://openalex.org/C133507102","wikidata":"https://www.wikidata.org/wiki/Q4712977","display_name":"Genitourinary system","level":2,"score":0.3336000144481659},{"id":"https://openalex.org/C78063203","wikidata":"https://www.wikidata.org/wiki/Q3062596","display_name":"DNA extraction","level":4,"score":0.33000001311302185},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.3273000121116638},{"id":"https://openalex.org/C2777563447","wikidata":"https://www.wikidata.org/wiki/Q7243397","display_name":"Primer (cosmetics)","level":2,"score":0.3222000002861023},{"id":"https://openalex.org/C48023723","wikidata":"https://www.wikidata.org/wiki/Q856198","display_name":"Real-time polymerase chain reaction","level":3,"score":0.2992999851703644},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.2606000006198883},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.25850000977516174},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.2556000053882599},{"id":"https://openalex.org/C2780849966","wikidata":"https://www.wikidata.org/wiki/Q170758","display_name":"Lymph node","level":2,"score":0.251800000667572}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.22437/jmj.v13i1.38458","doi":"https://doi.org/10.22437/jmj.v13i1.38458","is_oa":true,"landing_page_url":"https://doi.org/10.22437/jmj.v13i1.38458","pdf_url":"https://online-journal.unja.ac.id/kedokteran/article/download/38458/21895","source":{"id":"https://openalex.org/S4306514810","display_name":"JAMBI MEDICAL JOURNAL \"Jurnal Kedokteran dan Kesehatan\"","issn_l":"2339-269X","issn":["2339-269X","2580-6874"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Jambi Medical Journal : Jurnal Kedokteran dan Kesehatan","raw_type":"journal-article"},{"id":"pmh:oai:online-journal.unja.ac.id:article/38458","doi":null,"is_oa":true,"landing_page_url":"https://online-journal.unja.ac.id/index/article/view/38458","pdf_url":null,"source":{"id":"https://openalex.org/S4306514810","display_name":"JAMBI MEDICAL JOURNAL \"Jurnal Kedokteran dan Kesehatan\"","issn_l":"2339-269X","issn":["2339-269X","2580-6874"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2339-269X","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.22437/jmj.v13i1.38458","doi":"https://doi.org/10.22437/jmj.v13i1.38458","is_oa":true,"landing_page_url":"https://doi.org/10.22437/jmj.v13i1.38458","pdf_url":"https://online-journal.unja.ac.id/kedokteran/article/download/38458/21895","source":{"id":"https://openalex.org/S4306514810","display_name":"JAMBI MEDICAL JOURNAL \"Jurnal Kedokteran dan Kesehatan\"","issn_l":"2339-269X","issn":["2339-269X","2580-6874"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Jambi Medical Journal : Jurnal Kedokteran dan Kesehatan","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.98580002784729,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"study_designs":[{"id":"https://openalex.org/study-designs/observational-study","display_name":"Observational Study"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320329909","display_name":"Universitas Jambi","ror":"https://ror.org/00g1w3j30"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4415414951.pdf","grobid_xml":"https://content.openalex.org/works/W4415414951.grobid-xml"},"referenced_works_count":14,"referenced_works":["https://openalex.org/W1984577202","https://openalex.org/W2006126994","https://openalex.org/W2009801164","https://openalex.org/W2021743232","https://openalex.org/W2047943465","https://openalex.org/W2105335304","https://openalex.org/W2140606215","https://openalex.org/W2146448892","https://openalex.org/W2154668420","https://openalex.org/W2193645206","https://openalex.org/W2549880490","https://openalex.org/W2575352258","https://openalex.org/W3019104468","https://openalex.org/W4386315260"],"related_works":["https://openalex.org/W2939480827","https://openalex.org/W2610265283","https://openalex.org/W2039657281","https://openalex.org/W2027560524","https://openalex.org/W2029317008","https://openalex.org/W1547387259","https://openalex.org/W199329417","https://openalex.org/W4296250231","https://openalex.org/W2125878675","https://openalex.org/W4388489429"],"abstract_inverted_index":{"Background:":[0],"Extra":[1],"Pulmonary":[2],"Tuberculosis":[3,6],"(EPTB)":[4],"is":[5,31,38,42],"infection":[7],"in":[8,77],"organs":[9],"other":[10],"than":[11],"the":[12,53,58],"lungs,":[13],"like":[14],"pleura,":[15],"lymph":[16],"nodes,":[17],"abdomen,":[18],"genitourinary":[19],"tract,":[20],"skin,":[21],"joints":[22],"and":[23,46,92,127,142,175,178,185,211],"bones,":[24],"or":[25],"meninges.":[26],"The":[27,111],"Diagnosis":[28],"of":[29,36,63,83,147,205],"EPTB":[30,37,41,64,85,193,227],"still":[32],"challenging":[33],"because":[34],"symptoms":[35],"vary,":[39],"location":[40],"an":[43],"inaccessible":[44],"site,":[45],"paucibacillary":[47],"smear.":[48],"We":[49],"wanted":[50],"to":[51,104],"know":[52],"Mycobacterium":[54],"tuberculosis":[55],"identification":[56],"using":[57],"qPCR":[59,221],"method":[60],"on":[61,183],"samples":[62,206,215],"suspects.":[65],"Methods:":[66],"This":[67],"research":[68,72],"was":[69,100,132,171,181],"a":[70],"descriptive":[71],"with":[73,86,116,134,173,199,217],"laboratory":[74],"experiments.":[75],"Subjects":[76],"this":[78],"study":[79],"were":[80],"all":[81],"cases":[82],"suspected":[84],"clinically":[87],"diagnosed,":[88],"thoraks":[89],"radiographs,":[90],"colonoscopy,":[91],"formalin":[93],"fixed":[94],"paraffin":[95],"embedded":[96],"(FFPE).":[97],"DNA":[98,128],"extraction":[99,108],"carried":[101],"out":[102],"according":[103],"PureLink\u00ae":[105],"Genomic":[106],"dna":[107],"kit":[109],"instructions.":[110],"PCR":[112,121,170],"volume":[113],"20":[114],"ul":[115],"2x":[117],"QuantiNova":[118],"SYBR":[119],"Green":[120],"Kit,":[122],"M.tuberculosis":[123],"Primer":[124],"IS":[125],"6110,":[126],"Sample.":[129],"QPCR":[130],"temperatures":[131],"done":[133],"predenaturation":[135],"at":[136,149,156,164],"95":[137,150],"\u00b0C":[138,151,158,166],"for":[139,152,159,167,226],"3":[140],"minutes,":[141],"followed":[143],"45":[144],"cycles,":[145],"consist":[146],"denaturation":[148],"15":[153],"seconds,":[154],"annealing":[155],"60":[157],"30":[160,168,191],"seconds":[161],"dan":[162],"extenstion":[163],"72":[165],"seconds.":[169],"performed":[172],"positive":[174,184,218],"negative":[176,186],"controls,":[177],"data":[179],"analysis":[180],"based":[182],"ct":[187],"controls.":[188],"Results:":[189],"From":[190],"suspect":[192],"samples,":[194],"there":[195,212],"are":[196,213],"males":[197],"(56,67%),":[198],"age":[200],"36-55":[201],"yo":[202],"(50%),":[203],"site":[204],"most":[207],"from":[208],"gastrointestines":[209],"(70%),":[210],"6":[214],"(20%)":[216],"qPCR.":[219],"Conclusion:":[220],"methods":[222],"can":[223],"be":[224],"used":[225],"diagnosis.":[228]},"counts_by_year":[{"year":2026,"cited_by_count":1}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2025-10-24T00:00:00"}
