{"id":"https://openalex.org/W4414510741","doi":"https://doi.org/10.1128/aem.00883-25","title":"Environment and diet shape the geography-specific Drosophila melanogaster microbiota composition","display_name":"Environment and diet shape the geography-specific Drosophila melanogaster microbiota composition","publication_year":2025,"publication_date":"2025-09-25","ids":{"openalex":"https://openalex.org/W4414510741","doi":"https://doi.org/10.1128/aem.00883-25","pmid":"https://pubmed.ncbi.nlm.nih.gov/39416031","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/11482821"},"language":"en","primary_location":{"id":"doi:10.1128/aem.00883-25","doi":"https://doi.org/10.1128/aem.00883-25","is_oa":true,"landing_page_url":"https://doi.org/10.1128/aem.00883-25","pdf_url":null,"source":{"id":"https://openalex.org/S158228368","display_name":"Applied and Environmental Microbiology","issn_l":"0099-2240","issn":["0099-2240","1070-6291","1098-5336"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied and Environmental Microbiology","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://doi.org/10.1128/aem.00883-25","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Joseph T. Gale","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I100005738","display_name":"Brigham Young University","ror":"https://ror.org/047rhhm47","country_code":"US","type":"education","lineage":["https://openalex.org/I100005738"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joseph T. Gale","raw_affiliation_strings":["Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","institution_ids":["https://openalex.org/I100005738"]},{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA","institution_ids":["https://openalex.org/I100005738"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Rebecca Kreutz","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I100005738","display_name":"Brigham Young University","ror":"https://ror.org/047rhhm47","country_code":"US","type":"education","lineage":["https://openalex.org/I100005738"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rebecca Kreutz","raw_affiliation_strings":["Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","institution_ids":["https://openalex.org/I100005738"]},{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA","institution_ids":["https://openalex.org/I100005738"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113197828","display_name":"Sarah J. Gottfredson Morgan","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I100005738","display_name":"Brigham Young University","ror":"https://ror.org/047rhhm47","country_code":"US","type":"education","lineage":["https://openalex.org/I100005738"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sarah J. Gottfredson Morgan","raw_affiliation_strings":["Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","institution_ids":["https://openalex.org/I100005738"]},{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA","institution_ids":["https://openalex.org/I100005738"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077019741","display_name":"Emma K. Davis","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I100005738","display_name":"Brigham Young University","ror":"https://ror.org/047rhhm47","country_code":"US","type":"education","lineage":["https://openalex.org/I100005738"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Emma K. Davis","raw_affiliation_strings":["Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","institution_ids":["https://openalex.org/I100005738"]},{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA","institution_ids":["https://openalex.org/I100005738"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108175906","display_name":"Connor Hough","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I100005738","display_name":"Brigham Young University","ror":"https://ror.org/047rhhm47","country_code":"US","type":"education","lineage":["https://openalex.org/I100005738"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Connor Hough","raw_affiliation_strings":["Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","institution_ids":["https://openalex.org/I100005738"]},{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA","institution_ids":["https://openalex.org/I100005738"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109798062","display_name":"Wendy A. Cisneros Cancino","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I100005738","display_name":"Brigham Young University","ror":"https://ror.org/047rhhm47","country_code":"US","type":"education","lineage":["https://openalex.org/I100005738"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Wendy A. Cisneros Cancino","raw_affiliation_strings":["Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","institution_ids":["https://openalex.org/I100005738"]},{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA","institution_ids":["https://openalex.org/I100005738"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108175907","display_name":"Brittany Burnside","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I100005738","display_name":"Brigham Young University","ror":"https://ror.org/047rhhm47","country_code":"US","type":"education","lineage":["https://openalex.org/I100005738"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brittany Burnside","raw_affiliation_strings":["Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","institution_ids":["https://openalex.org/I100005738"]},{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA","institution_ids":["https://openalex.org/I100005738"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114243048","display_name":"Ryan P. Barney","orcid":"https://orcid.org/0000-0003-2884-8946","observed_orcids":["https://orcid.org/0000-0003-2884-8946"]},"institutions":[{"id":"https://openalex.org/I100005738","display_name":"Brigham Young University","ror":"https://ror.org/047rhhm47","country_code":"US","type":"education","lineage":["https://openalex.org/I100005738"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ryan Barney","raw_affiliation_strings":["Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","institution_ids":["https://openalex.org/I100005738"]},{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA","institution_ids":["https://openalex.org/I100005738"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108175908","display_name":"Reese Hunsaker","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I100005738","display_name":"Brigham Young University","ror":"https://ror.org/047rhhm47","country_code":"US","type":"education","lineage":["https://openalex.org/I100005738"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Reese Hunsaker","raw_affiliation_strings":["Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","institution_ids":["https://openalex.org/I100005738"]},{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA","institution_ids":["https://openalex.org/I100005738"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113425249","display_name":"Ashton Tanner Hoyt","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I100005738","display_name":"Brigham Young University","ror":"https://ror.org/047rhhm47","country_code":"US","type":"education","lineage":["https://openalex.org/I100005738"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ashton Tanner Hoyt","raw_affiliation_strings":["Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","institution_ids":["https://openalex.org/I100005738"]},{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA","institution_ids":["https://openalex.org/I100005738"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5098938260","display_name":"Aubrey Cluff","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I100005738","display_name":"Brigham Young University","ror":"https://ror.org/047rhhm47","country_code":"US","type":"education","lineage":["https://openalex.org/I100005738"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Aubrey Cluff","raw_affiliation_strings":["Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","institution_ids":["https://openalex.org/I100005738"]},{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA","institution_ids":["https://openalex.org/I100005738"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5096171379","display_name":"Maggie Nosker","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I100005738","display_name":"Brigham Young University","ror":"https://ror.org/047rhhm47","country_code":"US","type":"education","lineage":["https://openalex.org/I100005738"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Maggie Nosker","raw_affiliation_strings":["Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","institution_ids":["https://openalex.org/I100005738"]},{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA","institution_ids":["https://openalex.org/I100005738"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108175904","display_name":"Chandler Sefcik","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I100005738","display_name":"Brigham Young University","ror":"https://ror.org/047rhhm47","country_code":"US","type":"education","lineage":["https://openalex.org/I100005738"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chandler Sefcik","raw_affiliation_strings":["Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","institution_ids":["https://openalex.org/I100005738"]},{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA","institution_ids":["https://openalex.org/I100005738"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108175905","display_name":"Eliza Beales","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I100005738","display_name":"Brigham Young University","ror":"https://ror.org/047rhhm47","country_code":"US","type":"education","lineage":["https://openalex.org/I100005738"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Eliza Beales","raw_affiliation_strings":["Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","institution_ids":["https://openalex.org/I100005738"]},{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA","institution_ids":["https://openalex.org/I100005738"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5096328539","display_name":"Jack K. Beltz","orcid":"https://orcid.org/0009-0005-2690-5179","observed_orcids":["https://orcid.org/0009-0005-2690-5179"]},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jack Beltz","raw_affiliation_strings":["Department of Biology, University of Pennsylvania, Philadelphia, PA 19104","Department of Biology, University of Pennsylvania, Philadelphia, Pennsylvania, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, University of Pennsylvania, Philadelphia, PA 19104","institution_ids":["https://openalex.org/I79576946"]},{"raw_affiliation_string":"Department of Biology, University of Pennsylvania, Philadelphia, Pennsylvania, USA","institution_ids":["https://openalex.org/I79576946"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044551702","display_name":"Paul B. Frandsen","orcid":"https://orcid.org/0000-0002-4801-7579","observed_orcids":["https://orcid.org/0000-0002-4801-7579"]},"institutions":[{"id":"https://openalex.org/I100005738","display_name":"Brigham Young University","ror":"https://ror.org/047rhhm47","country_code":"US","type":"education","lineage":["https://openalex.org/I100005738"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Paul B. Frandsen","raw_affiliation_strings":["Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA"],"raw_orcid":"https://orcid.org/0000-0002-4801-7579","affiliations":[{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","institution_ids":["https://openalex.org/I100005738"]},{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA","institution_ids":["https://openalex.org/I100005738"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090479369","display_name":"PAUL S. SCHMIDT","orcid":"https://orcid.org/0000-0002-8076-6705","observed_orcids":["https://orcid.org/0000-0002-8076-6705"]},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Paul Schmidt","raw_affiliation_strings":["Department of Biology, University of Pennsylvania, Philadelphia, PA 19104","Department of Biology, University of Pennsylvania, Philadelphia, Pennsylvania, USA"],"raw_orcid":"https://orcid.org/0000-0002-8076-6705","affiliations":[{"raw_affiliation_string":"Department of Biology, University of Pennsylvania, Philadelphia, PA 19104","institution_ids":["https://openalex.org/I79576946"]},{"raw_affiliation_string":"Department of Biology, University of Pennsylvania, Philadelphia, Pennsylvania, USA","institution_ids":["https://openalex.org/I79576946"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5070939603","display_name":"John M. Chaston","orcid":"https://orcid.org/0000-0002-2625-6413","observed_orcids":["https://orcid.org/0000-0002-2625-6413"]},"institutions":[{"id":"https://openalex.org/I100005738","display_name":"Brigham Young University","ror":"https://ror.org/047rhhm47","country_code":"US","type":"education","lineage":["https://openalex.org/I100005738"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"John M. Chaston","raw_affiliation_strings":["Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA, 84602","institution_ids":["https://openalex.org/I100005738"]},{"raw_affiliation_string":"Department of Plant and Wildlife Sciences, Brigham Young University, Provo, Utah, USA","institution_ids":["https://openalex.org/I100005738"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5070939603"],"corresponding_institution_ids":["https://openalex.org/I100005738"],"apc_list":null,"apc_paid":null,"fwci":3.8329,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.9384989,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":98},"biblio":{"volume":"91","issue":"10","first_page":"e0088325","last_page":"e0088325"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12134","display_name":"Insect symbiosis and bacterial influences","score":0.9077000021934509,"subfield":{"id":"https://openalex.org/subfields/1109","display_name":"Insect Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12134","display_name":"Insect symbiosis and bacterial influences","score":0.9077000021934509,"subfield":{"id":"https://openalex.org/subfields/1109","display_name":"Insect Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.017100000753998756,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12606","display_name":"Diptera species taxonomy and behavior","score":0.013799999840557575,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/drosophila-melanogaster","display_name":"Drosophila melanogaster","score":0.9929999709129333},{"id":"https://openalex.org/keywords/gut-microbiota","display_name":"gut microbiota","score":0.7639999985694885},{"id":"https://openalex.org/keywords/regional-variation","display_name":"regional variation","score":0.8270000219345093},{"id":"https://openalex.org/keywords/diet","display_name":"diet","score":0.6269999742507935},{"id":"https://openalex.org/keywords/lactic-acid-bacteria","display_name":"lactic acid bacteria","score":0.8730000257492065},{"id":"https://openalex.org/keywords/ambient-temperature","display_name":"ambient temperature","score":0.7440000176429749},{"id":"https://openalex.org/keywords/seasonal-variation","display_name":"seasonal variation","score":0.8240000009536743},{"id":"https://openalex.org/keywords/local-adaptation","display_name":"local adaptation","score":0.7919999957084656},{"id":"https://openalex.org/keywords/host-evolution","display_name":"host evolution","score":0.6380000114440918},{"id":"https://openalex.org/keywords/orchards","display_name":"orchards","score":0.4970000088214874},{"id":"https://openalex.org/keywords/phenotypic-differentiation","display_name":"phenotypic differentiation","score":0.6880000233650208}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8776999711990356},{"id":"https://openalex.org/C539455810","wikidata":"https://www.wikidata.org/wiki/Q739734","display_name":"Gut flora","level":2,"score":0.6852999925613403},{"id":"https://openalex.org/C68873052","wikidata":"https://www.wikidata.org/wiki/Q349856","display_name":"Genetic variation","level":3,"score":0.5516999959945679},{"id":"https://openalex.org/C139807058","wikidata":"https://www.wikidata.org/wiki/Q352374","display_name":"Adaptation (eye)","level":2,"score":0.5430999994277954},{"id":"https://openalex.org/C90856448","wikidata":"https://www.wikidata.org/wiki/Q431","display_name":"Zoology","level":1,"score":0.5087000131607056},{"id":"https://openalex.org/C103316784","wikidata":"https://www.wikidata.org/wiki/Q3634109","display_name":"Microbial genetics","level":3,"score":0.4894999861717224},{"id":"https://openalex.org/C69562835","wikidata":"https://www.wikidata.org/wiki/Q3054637","display_name":"Microbial ecology","level":3,"score":0.4781999886035919},{"id":"https://openalex.org/C40231798","wikidata":"https://www.wikidata.org/wiki/Q1333743","display_name":"Composition (language)","level":2,"score":0.45500001311302185},{"id":"https://openalex.org/C77077793","wikidata":"https://www.wikidata.org/wiki/Q336019","display_name":"Abundance (ecology)","level":2,"score":0.44110000133514404},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.42739999294281006},{"id":"https://openalex.org/C81407943","wikidata":"https://www.wikidata.org/wiki/Q17149178","display_name":"Microbial population biology","level":3,"score":0.4180000126361847},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.39719998836517334},{"id":"https://openalex.org/C143121216","wikidata":"https://www.wikidata.org/wiki/Q1330402","display_name":"Microbiome","level":2,"score":0.38850000500679016},{"id":"https://openalex.org/C87590526","wikidata":"https://www.wikidata.org/wiki/Q3592884","display_name":"Experimental evolution","level":3,"score":0.37720000743865967},{"id":"https://openalex.org/C62277055","wikidata":"https://www.wikidata.org/wiki/Q295130","display_name":"Phenotypic plasticity","level":2,"score":0.3562999963760376},{"id":"https://openalex.org/C101014631","wikidata":"https://www.wikidata.org/wiki/Q4889568","display_name":"Microbial metabolism","level":3,"score":0.3443000018596649},{"id":"https://openalex.org/C2776927270","wikidata":"https://www.wikidata.org/wiki/Q815962","display_name":"Colonization","level":2,"score":0.3352999985218048},{"id":"https://openalex.org/C2778334786","wikidata":"https://www.wikidata.org/wiki/Q1586270","display_name":"Variation (astronomy)","level":2,"score":0.32910001277923584},{"id":"https://openalex.org/C122325731","wikidata":"https://www.wikidata.org/wiki/Q3738459","display_name":"Relative species abundance","level":3,"score":0.3149999976158142},{"id":"https://openalex.org/C172777353","wikidata":"https://www.wikidata.org/wiki/Q1374271","display_name":"Genetic variability","level":4,"score":0.2962000072002411},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.2858999967575073},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.27480000257492065},{"id":"https://openalex.org/C2993083740","wikidata":"https://www.wikidata.org/wiki/Q7897815","display_name":"Geographic variation","level":3,"score":0.26510000228881836},{"id":"https://openalex.org/C130217890","wikidata":"https://www.wikidata.org/wiki/Q47041","display_name":"Biodiversity","level":2,"score":0.26420000195503235},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.25270000100135803},{"id":"https://openalex.org/C175605896","wikidata":"https://www.wikidata.org/wiki/Q39833","display_name":"Microorganism","level":3,"score":0.2513999938964844}],"mesh":[],"locations_count":7,"locations":[{"id":"doi:10.1128/aem.00883-25","doi":"https://doi.org/10.1128/aem.00883-25","is_oa":true,"landing_page_url":"https://doi.org/10.1128/aem.00883-25","pdf_url":null,"source":{"id":"https://openalex.org/S158228368","display_name":"Applied and Environmental Microbiology","issn_l":"0099-2240","issn":["0099-2240","1070-6291","1098-5336"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied and Environmental Microbiology","raw_type":"journal-article"},{"id":"doi:10.1101/2024.10.07.617096","doi":"https://doi.org/10.1101/2024.10.07.617096","is_oa":false,"landing_page_url":"https://doi.org/10.1101/2024.10.07.617096","pdf_url":null,"source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},{"id":"pmh:oai:europepmc.org:11350475","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12542676","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Text"},{"id":"pmid:39416031","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39416031","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"bioRxiv : the preprint server for biology","raw_type":"Journal Article"},{"id":"pmid:40996233","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40996233","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied and environmental microbiology","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:11482821","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11482821","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:d362915555d8430ebaee10fd512efcd5","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/d362915555d8430ebaee10fd512efcd5","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Applied and Environmental Microbiology, Vol 91, Iss 10 (2025)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1128/aem.00883-25","doi":"https://doi.org/10.1128/aem.00883-25","is_oa":true,"landing_page_url":"https://doi.org/10.1128/aem.00883-25","pdf_url":null,"source":{"id":"https://openalex.org/S158228368","display_name":"Applied and Environmental Microbiology","issn_l":"0099-2240","issn":["0099-2240","1070-6291","1098-5336"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied and Environmental Microbiology","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G3333129239","display_name":null,"funder_award_id":"R15GM140388","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G5837505158","display_name":"The causes of geographic variation in Drosophila melanogaster microbiota composition","funder_award_id":"1r15gm140388-01","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":94,"referenced_works":["https://openalex.org/W1130588615","https://openalex.org/W1523266228","https://openalex.org/W1847696276","https://openalex.org/W1964837158","https://openalex.org/W1966247448","https://openalex.org/W1980077364","https://openalex.org/W2000259070","https://openalex.org/W2013669259","https://openalex.org/W2019703934","https://openalex.org/W2031442063","https://openalex.org/W2031611770","https://openalex.org/W2033591591","https://openalex.org/W2047123551","https://openalex.org/W2052469852","https://openalex.org/W2060951467","https://openalex.org/W2065796860","https://openalex.org/W2068381362","https://openalex.org/W2073300538","https://openalex.org/W2079370769","https://openalex.org/W2083634561","https://openalex.org/W2092646019","https://openalex.org/W2097467203","https://openalex.org/W2099411381","https://openalex.org/W2112936371","https://openalex.org/W2116450982","https://openalex.org/W2117457769","https://openalex.org/W2119776584","https://openalex.org/W2125202857","https://openalex.org/W2127774996","https://openalex.org/W2128599926","https://openalex.org/W2129736385","https://openalex.org/W2149934132","https://openalex.org/W2154026962","https://openalex.org/W2154780969","https://openalex.org/W2154789865","https://openalex.org/W2155366287","https://openalex.org/W2159267296","https://openalex.org/W2161478038","https://openalex.org/W2167163043","https://openalex.org/W2170024099","https://openalex.org/W2171068240","https://openalex.org/W2175293225","https://openalex.org/W2178369935","https://openalex.org/W2224802932","https://openalex.org/W2401404581","https://openalex.org/W2568451172","https://openalex.org/W2599235425","https://openalex.org/W2608401495","https://openalex.org/W2626777697","https://openalex.org/W2734227805","https://openalex.org/W2734780667","https://openalex.org/W2740399096","https://openalex.org/W2754511195","https://openalex.org/W2764275762","https://openalex.org/W2766693952","https://openalex.org/W2783592400","https://openalex.org/W2783764624","https://openalex.org/W2803846843","https://openalex.org/W2810801201","https://openalex.org/W2902868023","https://openalex.org/W2942981886","https://openalex.org/W2949101656","https://openalex.org/W2953083197","https://openalex.org/W2963276645","https://openalex.org/W2974712514","https://openalex.org/W2996057722","https://openalex.org/W3004029283","https://openalex.org/W3021211105","https://openalex.org/W3033161349","https://openalex.org/W3080790949","https://openalex.org/W3155889268","https://openalex.org/W3198625378","https://openalex.org/W4229440319","https://openalex.org/W4242289937","https://openalex.org/W4254687493","https://openalex.org/W4289334028","https://openalex.org/W4296555331","https://openalex.org/W4316020804","https://openalex.org/W4316814926","https://openalex.org/W4321611856","https://openalex.org/W4328103772","https://openalex.org/W4328127933","https://openalex.org/W4365136448","https://openalex.org/W4365443930","https://openalex.org/W4386116516","https://openalex.org/W4392451648","https://openalex.org/W4392925715","https://openalex.org/W4393253558","https://openalex.org/W4394014958","https://openalex.org/W4396641858","https://openalex.org/W4399590716","https://openalex.org/W4400897953","https://openalex.org/W4405056740","https://openalex.org/W4415221727"],"related_works":["https://openalex.org/W7126061254","https://openalex.org/W4396641858","https://openalex.org/W7096832120","https://openalex.org/W4213165740","https://openalex.org/W1847696276","https://openalex.org/W7095423181","https://openalex.org/W2996057722","https://openalex.org/W2129736385","https://openalex.org/W2756165608","https://openalex.org/W3186566293"],"abstract_inverted_index":{"ABSTRACT":[0],"Geographic":[1],"and":[2,16,68,96,117,192,215,234,243,273,316,324],"environmental":[3,48],"variation":[4,38,52,162,194,206,283,333],"in":[5,39,53,92,115,140,163,176,207,212,249,292,300,334],"the":[6,14,40,75,106,141,164,186,201,246,256,293,296,313,322],"animal":[7,221],"microbiota":[8,41,62,77,94,150,166,190,208,247,257,282,317,323,335],"can":[9,210,263,284,337],"be":[10,26,264],"directly":[11],"linked":[12],"to":[13,25,31,145,241],"evolution":[15,233],"wild":[17,37,66,116,235,250,260,308],"fitness":[18],"of":[19,43,83,172,218,228,259,281,298],"their":[20,69,93,231],"hosts":[21],"but":[22,237],"often":[23],"appears":[24],"disordered.":[27],"Here,":[28,252],"we":[29,158,253,305],"sought":[30],"better":[32,57,152],"understand":[33],"patterns":[34],"that":[35,74,137,160,204,255,307],"underlie":[36],"composition":[42,209,258],"Drosophila":[44,261],"melanogaster":[45,262],".":[46],"First,":[47],"temperature":[49],"predicted":[50],"geographic":[51,269],"fly":[54,76,165,173,309],"microbial":[55,226],"communities":[56,227],"than":[58],"latitude":[59],"did.":[60],"The":[61,225],"also":[63],"differed":[64],"between":[65,185,321],"flies":[67,97,121,142],"diets,":[70],"supporting":[71],"previous":[72,302],"conclusions":[73],"is":[78,167,239],"not":[79],"merely":[80],"a":[81,111,177,219],"reflection":[82],"diet.":[84],"Flies":[85],"feeding":[86],"on":[87],"different":[88],"diets":[89],"varied":[90],"significantly":[91,123],"composition,":[95,191,318],"sampled":[98,127],"from":[99,128],"individual":[100],"apples":[101],"were":[102],"exceptionally":[103],"depauperate":[104],"for":[105],"Lactic":[107],"Acid":[108],"Bacteria":[109],"(LAB),":[110],"major":[112],"bacterial":[113],"group":[114],"laboratory":[118],"flies.":[119],"However,":[120],"bore":[122],"more":[124],"LAB":[125,138,299],"when":[126],"other":[129,149],"fruits":[130],"or":[131],"compost":[132],"piles.":[133],"Follow-up":[134],"analyses":[135],"revealed":[136],"abundance":[139,291],"uniquely":[143],"responds":[144],"fruit":[146],"decomposition,":[147,272],"whereas":[148],"members":[151],"indicate":[153],"temporal":[154],"seasonal":[155],"progression.":[156],"Finally,":[157,304],"show":[159,277,306],"diet-dependent":[161],"associated":[168],"with":[169,312],"phenotypic":[170],"differentiation":[171,217],"lines":[174],"collected":[175],"single":[178],"orchard.":[179],"These":[180],"last":[181],"findings":[182,329],"link":[183],"covariation":[184],"flies\u2019":[187,314],"dietary":[188],"history,":[189],"genetic":[193],"across":[195],"relatively":[196],"small":[197],"(single-orchard)":[198],"landscapes,":[199],"reinforcing":[200],"critical":[202],"role":[203],"environment-dependent":[205],"play":[211],"local":[213],"adaptation":[214],"genomic":[216],"model":[220],"host.":[222],"SIGNIFICANCE":[223],"STATEMENT":[224],"animals":[229],"influence":[230],"hosts\u2019":[232],"fitness,":[236],"it":[238],"hard":[240],"predict":[242],"explain":[244,286,331],"how":[245,278,332],"varies":[248],"animals.":[251],"describe":[254],"ordered":[265],"by":[266],"temperature,":[267],"humidity,":[268],"distance,":[270],"diet":[271,274,315],"type.":[275],"We":[276],"these":[279,328],"determinants":[280],"help":[285,330],"lactic":[287],"acid":[288],"bacteria":[289],"(LAB)":[290],"flies,":[294],"including":[295],"rarity":[297],"some":[301],"studies.":[303],"phenotypes":[310],"segregate":[311],"illuminating":[319],"links":[320],"host":[325],"evolution.":[326],"Together,":[327],"compositions":[336],"shape":[338],"an":[339],"animal\u2019s":[340],"life":[341],"history.":[342]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":2}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2025-09-26T00:00:00"}
