{"id":"https://openalex.org/W4412394366","doi":"https://doi.org/10.1128/jcm.00028-25","title":"Percentage of culture confirmation and melting curve analysis reveals false-positive Campylobacter detection in a molecular syndromic panel","display_name":"Percentage of culture confirmation and melting curve analysis reveals false-positive Campylobacter detection in a molecular syndromic panel","publication_year":2025,"publication_date":"2025-07-14","ids":{"openalex":"https://openalex.org/W4412394366","doi":"https://doi.org/10.1128/jcm.00028-25","pmid":"https://pubmed.ncbi.nlm.nih.gov/40657925"},"language":"en","primary_location":{"id":"doi:10.1128/jcm.00028-25","doi":"https://doi.org/10.1128/jcm.00028-25","is_oa":true,"landing_page_url":"https://doi.org/10.1128/jcm.00028-25","pdf_url":null,"source":{"id":"https://openalex.org/S53087977","display_name":"Journal of Clinical Microbiology","issn_l":"0095-1137","issn":["0095-1137","1070-633X","1098-660X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Clinical Microbiology","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://doi.org/10.1128/jcm.00028-25","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Annie Sanchez","orcid":"https://orcid.org/0000-0003-2613-9396","observed_orcids":["https://orcid.org/0000-0003-2613-9396"]},"institutions":[{"id":"https://openalex.org/I1289490764","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12","country_code":"US","type":"government","lineage":["https://openalex.org/I1289490764","https://openalex.org/I1299022934"]},{"id":"https://openalex.org/I4210102376","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/00qzjvm58","country_code":"UG","type":"government","lineage":["https://openalex.org/I4210102376"]},{"id":"https://openalex.org/I4210145675","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/047h8wb98","country_code":"KE","type":"government","lineage":["https://openalex.org/I4210145675"]},{"id":"https://openalex.org/I4405272115","display_name":"State of Wisconsin","ror":"https://ror.org/03kaf7t44","country_code":"US","type":"government","lineage":["https://openalex.org/I4405272115"]}],"countries":["KE","UG","US"],"is_corresponding":false,"raw_author_name":"Annie Sanchez","raw_affiliation_strings":["Communicable Disease Division, Wisconsin State Laboratory of Hygiene","Laboratory Leadership Service, Centers for Disease Control and Prevention","Communicable Disease Division, Wisconsin State Laboratory of Hygiene, Madison, Wisconsin, USA","Laboratory Leadership Service, Centers for Disease Control and Prevention, Atlanta, Georgia, USA"],"raw_orcid":"https://orcid.org/0000-0003-2613-9396","affiliations":[{"raw_affiliation_string":"Communicable Disease Division, Wisconsin State Laboratory of Hygiene","institution_ids":[]},{"raw_affiliation_string":"Laboratory Leadership Service, Centers for Disease Control and Prevention","institution_ids":["https://openalex.org/I1289490764","https://openalex.org/I4210102376","https://openalex.org/I4210145675"]},{"raw_affiliation_string":"Communicable Disease Division, Wisconsin State Laboratory of Hygiene, Madison, Wisconsin, USA","institution_ids":["https://openalex.org/I4405272115"]},{"raw_affiliation_string":"Laboratory Leadership Service, Centers for Disease Control and Prevention, Atlanta, Georgia, USA","institution_ids":["https://openalex.org/I1289490764"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Michael Rauch","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4405272115","display_name":"State of Wisconsin","ror":"https://ror.org/03kaf7t44","country_code":"US","type":"government","lineage":["https://openalex.org/I4405272115"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael Rauch","raw_affiliation_strings":["Communicable Disease Division, Wisconsin State Laboratory of Hygiene","Communicable Disease Division, Wisconsin State Laboratory of Hygiene, Madison, Wisconsin, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Communicable Disease Division, Wisconsin State Laboratory of Hygiene","institution_ids":[]},{"raw_affiliation_string":"Communicable Disease Division, Wisconsin State Laboratory of Hygiene, Madison, Wisconsin, USA","institution_ids":["https://openalex.org/I4405272115"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5118976303","display_name":"Sherry Buechner","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4405272115","display_name":"State of Wisconsin","ror":"https://ror.org/03kaf7t44","country_code":"US","type":"government","lineage":["https://openalex.org/I4405272115"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sherry Buechner","raw_affiliation_strings":["Communicable Disease Division, Wisconsin State Laboratory of Hygiene","Communicable Disease Division, Wisconsin State Laboratory of Hygiene, Madison, Wisconsin, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Communicable Disease Division, Wisconsin State Laboratory of Hygiene","institution_ids":[]},{"raw_affiliation_string":"Communicable Disease Division, Wisconsin State Laboratory of Hygiene, Madison, Wisconsin, USA","institution_ids":["https://openalex.org/I4405272115"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013656830","display_name":"Brittney D. Jung-Hynes","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I2799905417","display_name":"UW Health University Hospital","ror":"https://ror.org/02mqqhj42","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I135310074","https://openalex.org/I2799905417","https://openalex.org/I4210132596"]},{"id":"https://openalex.org/I4210132596","display_name":"University of Wisconsin Health","ror":"https://ror.org/03e3qgk42","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210132596"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brittney Jung-Hynes","raw_affiliation_strings":["University/Hospital and Clinics, UW Health Clinical Laboratories","University/Hospital and Clinics, UW Health Clinical Laboratories, Madison, Wisconsin, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University/Hospital and Clinics, UW Health Clinical Laboratories","institution_ids":["https://openalex.org/I2799905417","https://openalex.org/I4210132596"]},{"raw_affiliation_string":"University/Hospital and Clinics, UW Health Clinical Laboratories, Madison, Wisconsin, USA","institution_ids":["https://openalex.org/I2799905417","https://openalex.org/I4210132596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074703604","display_name":"Eric T. Beck","orcid":"https://orcid.org/0000-0002-3383-8665","observed_orcids":["https://orcid.org/0000-0002-3383-8665"]},"institutions":[{"id":"https://openalex.org/I4210089764","display_name":"Aurora West Allis Medical Center","ror":"https://ror.org/007vvce33","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I117397414","https://openalex.org/I4210089764"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Eric Beck","raw_affiliation_strings":["Aurora West Allis Medical Center, ACL Laboratories","Aurora West Allis Medical Center, ACL Laboratories, West Allis, Wisconsin, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Aurora West Allis Medical Center, ACL Laboratories","institution_ids":["https://openalex.org/I4210089764"]},{"raw_affiliation_string":"Aurora West Allis Medical Center, ACL Laboratories, West Allis, Wisconsin, USA","institution_ids":["https://openalex.org/I4210089764"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5037513467","display_name":"Allen Bateman","orcid":"https://orcid.org/0000-0002-1094-3980","observed_orcids":["https://orcid.org/0000-0002-1094-3980"]},"institutions":[{"id":"https://openalex.org/I4405272115","display_name":"State of Wisconsin","ror":"https://ror.org/03kaf7t44","country_code":"US","type":"government","lineage":["https://openalex.org/I4405272115"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Allen Bateman","raw_affiliation_strings":["Communicable Disease Division, Wisconsin State Laboratory of Hygiene","Communicable Disease Division, Wisconsin State Laboratory of Hygiene, Madison, Wisconsin, USA"],"raw_orcid":"https://orcid.org/0000-0002-1094-3980","affiliations":[{"raw_affiliation_string":"Communicable Disease Division, Wisconsin State Laboratory of Hygiene","institution_ids":[]},{"raw_affiliation_string":"Communicable Disease Division, Wisconsin State Laboratory of Hygiene, Madison, Wisconsin, USA","institution_ids":["https://openalex.org/I4405272115"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":7,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":1.3011,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.78831994,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":97,"max":98},"biblio":{"volume":"63","issue":"8","first_page":"e0002825","last_page":"e0002825"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10486","display_name":"Salmonella and Campylobacter epidemiology","score":0.9473000168800354,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10486","display_name":"Salmonella and Campylobacter epidemiology","score":0.9473000168800354,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12167","display_name":"Bacterial Identification and Susceptibility Testing","score":0.05090000107884407,"subfield":{"id":"https://openalex.org/subfields/1308","display_name":"Clinical Biochemistry"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10976","display_name":"Viral gastroenteritis research and epidemiology","score":0.0006000000284984708,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/campylobacter","display_name":"Campylobacter","score":0.9750000238418579},{"id":"https://openalex.org/keywords/false-positive-detection","display_name":"false positive detection","score":0.8159999847412109},{"id":"https://openalex.org/keywords/melt-curve-analysis","display_name":"melting curve analysis","score":0.8270000219345093},{"id":"https://openalex.org/keywords/culture-confirmation","display_name":"culture confirmation","score":0.6420000195503235},{"id":"https://openalex.org/keywords/salmonella","display_name":"Salmonella","score":0.8730000257492065},{"id":"https://openalex.org/keywords/shiga-toxin-producing-escherichia-coli","display_name":"Shiga toxin-producing Escherichia coli","score":0.9359999895095825},{"id":"https://openalex.org/keywords/gastrointestinal-infections","display_name":"gastrointestinal infections","score":0.7409999966621399},{"id":"https://openalex.org/keywords/diagnostic-performance","display_name":"diagnostic performance","score":0.6000000238418579},{"id":"https://openalex.org/keywords/disease-surveillance","display_name":"disease surveillance","score":0.6940000057220459},{"id":"https://openalex.org/keywords/wisconsin","display_name":"Wisconsin","score":0.7009999752044678},{"id":"https://openalex.org/keywords/outbreak-detection","display_name":"outbreak detection","score":0.44200000166893005}],"concepts":[{"id":"https://openalex.org/C2779910956","wikidata":"https://www.wikidata.org/wiki/Q131488","display_name":"Campylobacter","level":3,"score":0.9253662824630737},{"id":"https://openalex.org/C2781065037","wikidata":"https://www.wikidata.org/wiki/Q150839","display_name":"Salmonella","level":3,"score":0.6516443490982056},{"id":"https://openalex.org/C116675565","wikidata":"https://www.wikidata.org/wiki/Q3241045","display_name":"Outbreak","level":2,"score":0.5307811498641968},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.48164644837379456},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4050283432006836},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3558354377746582},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.2627897560596466},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.16945511102676392},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001431","descriptor_name":"Bacteriological Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D001431","descriptor_name":"Bacteriological Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D001431","descriptor_name":"Bacteriological Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D001431","descriptor_name":"Bacteriological Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D001431","descriptor_name":"Bacteriological Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002167","descriptor_name":"Campylobacter","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D002167","descriptor_name":"Campylobacter","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D002167","descriptor_name":"Campylobacter","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D002167","descriptor_name":"Campylobacter","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D002167","descriptor_name":"Campylobacter","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D002167","descriptor_name":"Campylobacter","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":true},{"descriptor_ui":"D002167","descriptor_name":"Campylobacter","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":true},{"descriptor_ui":"D002167","descriptor_name":"Campylobacter","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":true},{"descriptor_ui":"D002167","descriptor_name":"Campylobacter","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":true},{"descriptor_ui":"D002167","descriptor_name":"Campylobacter","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":true},{"descriptor_ui":"D002169","descriptor_name":"Campylobacter Infections","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D002169","descriptor_name":"Campylobacter Infections","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D002169","descriptor_name":"Campylobacter Infections","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D002169","descriptor_name":"Campylobacter Infections","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D002169","descriptor_name":"Campylobacter Infections","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D002169","descriptor_name":"Campylobacter Infections","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D002169","descriptor_name":"Campylobacter Infections","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D002169","descriptor_name":"Campylobacter Infections","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D002169","descriptor_name":"Campylobacter Infections","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D002169","descriptor_name":"Campylobacter Infections","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D005189","descriptor_name":"False Positive Reactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005189","descriptor_name":"False Positive Reactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005189","descriptor_name":"False Positive Reactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005189","descriptor_name":"False Positive Reactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005189","descriptor_name":"False Positive Reactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012475","descriptor_name":"Salmonella","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012475","descriptor_name":"Salmonella","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012475","descriptor_name":"Salmonella","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012475","descriptor_name":"Salmonella","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012475","descriptor_name":"Salmonella","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012475","descriptor_name":"Salmonella","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D012475","descriptor_name":"Salmonella","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D012475","descriptor_name":"Salmonella","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D012475","descriptor_name":"Salmonella","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D012475","descriptor_name":"Salmonella","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014922","descriptor_name":"Wisconsin","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D014922","descriptor_name":"Wisconsin","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D014922","descriptor_name":"Wisconsin","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D014922","descriptor_name":"Wisconsin","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D014922","descriptor_name":"Wisconsin","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D025202","descriptor_name":"Molecular Diagnostic Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D025202","descriptor_name":"Molecular Diagnostic Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D025202","descriptor_name":"Molecular Diagnostic Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D025202","descriptor_name":"Molecular Diagnostic Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D025202","descriptor_name":"Molecular Diagnostic Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D054323","descriptor_name":"Shiga-Toxigenic Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D054323","descriptor_name":"Shiga-Toxigenic Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D054323","descriptor_name":"Shiga-Toxigenic Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D054323","descriptor_name":"Shiga-Toxigenic Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D054323","descriptor_name":"Shiga-Toxigenic Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D054323","descriptor_name":"Shiga-Toxigenic Escherichia coli","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D054323","descriptor_name":"Shiga-Toxigenic Escherichia coli","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D054323","descriptor_name":"Shiga-Toxigenic Escherichia coli","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D054323","descriptor_name":"Shiga-Toxigenic Escherichia coli","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D054323","descriptor_name":"Shiga-Toxigenic Escherichia coli","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1128/jcm.00028-25","doi":"https://doi.org/10.1128/jcm.00028-25","is_oa":true,"landing_page_url":"https://doi.org/10.1128/jcm.00028-25","pdf_url":null,"source":{"id":"https://openalex.org/S53087977","display_name":"Journal of Clinical Microbiology","issn_l":"0095-1137","issn":["0095-1137","1070-633X","1098-660X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Clinical Microbiology","raw_type":"journal-article"},{"id":"pmid:40657925","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40657925","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of clinical microbiology","raw_type":"Journal Article"},{"id":"pmh:oai:europepmc.org:11155718","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12345244","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:12345244","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12345244","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Clin Microbiol","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:208eb95541b343f0ac42a6b11a5489e3","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/208eb95541b343f0ac42a6b11a5489e3","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Clinical Microbiology, Vol 63, Iss 8 (2025)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1128/jcm.00028-25","doi":"https://doi.org/10.1128/jcm.00028-25","is_oa":true,"landing_page_url":"https://doi.org/10.1128/jcm.00028-25","pdf_url":null,"source":{"id":"https://openalex.org/S53087977","display_name":"Journal of Clinical Microbiology","issn_l":"0095-1137","issn":["0095-1137","1070-633X","1098-660X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Clinical Microbiology","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6240000128746033,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"sustainable_development_goals_aurora":[{"score":0.6499999761581421,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":8,"referenced_works":["https://openalex.org/W83129370","https://openalex.org/W2336123775","https://openalex.org/W2340538846","https://openalex.org/W2482113134","https://openalex.org/W2533544475","https://openalex.org/W2607433463","https://openalex.org/W4294350218","https://openalex.org/W4399037323"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2082860237","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2046158694","https://openalex.org/W2788277189","https://openalex.org/W2013243191","https://openalex.org/W1971568933"],"abstract_inverted_index":{"ABSTRACT":[0],"Surveillance":[1],"of":[2,52,58,83,90,114,180,216,221,244,283,297],"enteric":[3,32,284,301],"organisms":[4],"can":[5,399],"identify":[6,249,401],"outbreaks":[7],"and":[8,60,71,86,102,124,224,280,290,330,341,364],"support":[9],"control":[10],"measures.":[11],"The":[12,48,306],"BIOFIRE":[13],"FilmArray":[14,46,96,108,129,146,172,201,232,308,335,382],"Gastrointestinal":[15,309],"Panel":[16],"(FilmArray":[17,311],"GI)":[18,312],"is":[19,313],"the":[20,45,56,80,87,107,184,213,218,225,231,242,266,298,315,334,344,381,393],"most":[21,299,316],"common":[22,317],"culture-independent":[23,273],"diagnostic":[24,255,274,405],"test":[25],"(CIDT)":[26],"used":[27,319,348],"in":[28,112,187,189,265,304,343],"Wisconsin":[29,49,321],"to":[30,75,117,132,176,248,324,353],"diagnose":[31,325],"infections.":[33,332],"State":[34,50],"clinical":[35,322],"laboratories":[36,270,323],"have":[37],"raised":[38],"concerns":[39],"about":[40],"inaccurate":[41],"Campylobacter":[42,67,84,98,142,165,209,237,286,326,378],"detection":[43],"with":[44,203,252,387,404],"GI.":[47,97],"Laboratory":[51],"Hygiene":[53],"(WSLH)":[54],"evaluated":[55],"percentage":[57,113,215,220],"positivity":[59,115,363],"culture":[61,138,151,222,365],"confirmations":[62,152,168,366],"stratified":[63],"by":[64,95,128,145,200,320],"CIDT":[65,318],"for":[66,171,278,357],",":[68,70,99,101,287,289,327,329],"Salmonella":[69,100,123,288,328],"STEC":[72,103,125,331],"from":[73,156,380],"2018":[74],"2024.":[76],"We":[77,360],"further":[78],"analyzed":[79,361],"transport":[81,188],"time":[82],"specimens":[85,91,104,126,143,155,198],"melt":[88,195,227,389],"curves":[89,196,228],"that":[92,205,230],"tested":[93,105,119],"positive":[94,127,144,154,199],"on":[106,120,272,368,392],"GI":[109,147,173,202,233,336],"had":[110,135,148,338],"increases":[111],"compared":[116,131,175],"those":[118],"other":[121,133,157,177],"CIDTs.":[122],"GI,":[130,383],"CIDTs,":[134,178],"no":[136],"significant":[137],"confirmation":[139],"differences.":[140],"However,":[141,333],"significantly":[149],"lower":[150,170,219],"than":[153],"CIDTs":[158],"(62%":[159],"vs.":[160],"78%;":[161],"P":[162],"<":[163],"0.05).":[164],"c":[166],"ulture":[167],"were":[169,385],"specimens,":[174],"regardless":[179],"how":[181],"many":[182],"days":[183],"specimen":[185],"spent":[186],"2023.":[190],"Additionally,":[191],"we":[192,347,374],"found":[193],"atypical":[194,226,388],"among":[197],"cultures":[204],"did":[206],"not":[207],"grow":[208],".":[210],"Taken":[211],"together,":[212],"higher":[214],"positivity,":[217],"confirmation,":[223],"suggest":[229],"might":[234],"yield":[235],"false-positive":[236,377],"results.":[238],"These":[239],"findings":[240],"emphasize":[241],"importance":[243],"public":[245,349],"health":[246,350,397],"surveillance":[247,351,398],"potential":[250,376,402],"issues":[251,340,403],"commercially":[253],"available":[254],"tests.":[256],"IMPORTANCE":[257],"Enteric":[258],"pathogens":[259],"cause":[260],"~9.4":[261],"million":[262],"illnesses":[263],"annually":[264],"United":[267],"States.":[268],"Clinical":[269],"rely":[271],"testing":[275,369],"platforms":[276],"(CIDTs)":[277],"rapid":[279],"accurate":[281],"diagnosis":[282],"pathogens.":[285],"Shiga-toxin-producing":[291],"Escherichia":[292],"coli":[293],"(STEC)":[294],"are":[295],"three":[296],"identified":[300,375],"bacterial":[302],"infections":[303],"Wisconsin.":[305],"BioFire":[307,394],"panel":[310],"currently":[314],"has":[337],"notable":[339],"recalls":[342],"past.":[345],"Here,":[346],"data":[352],"assess":[354],"platform":[355],"performance":[356],"these":[358],"organisms.":[359],"percent":[362],"based":[367],"platforms.":[370,406],"Through":[371],"our":[372],"analysis,":[373],"results":[379],"which":[384],"associated":[386],"curve":[390],"profiles":[391],"platform.":[395],"Public":[396],"help":[400]},"counts_by_year":[{"year":2026,"cited_by_count":3}],"updated_date":"2026-10-12T09:40:04.860316","created_date":"2025-07-14T00:00:00"}