{"id":"https://openalex.org/W4411744950","doi":"https://doi.org/10.1186/s13227-025-00241-x","title":"A subset of conserved phagocytic genes are likely used for the intracellular theft of cnidarian stinging organelles in nudibranch gastropods","display_name":"A subset of conserved phagocytic genes are likely used for the intracellular theft of cnidarian stinging organelles in nudibranch gastropods","publication_year":2025,"publication_date":"2025-06-28","ids":{"openalex":"https://openalex.org/W4411744950","doi":"https://doi.org/10.1186/s13227-025-00241-x","pmid":"https://pubmed.ncbi.nlm.nih.gov/40027626","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/11870399"},"language":"en","primary_location":{"id":"doi:10.1186/s13227-025-00241-x","doi":"https://doi.org/10.1186/s13227-025-00241-x","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13227-025-00241-x","pdf_url":"https://evodevojournal.biomedcentral.com/counter/pdf/10.1186/s13227-025-00241-x","source":{"id":"https://openalex.org/S128203929","display_name":"EvoDevo","issn_l":"2041-9139","issn":["2041-9139"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","norway-1","poland-100","russia-white-list-2"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"EvoDevo","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://evodevojournal.biomedcentral.com/counter/pdf/10.1186/s13227-025-00241-x","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5073700599","display_name":"Jessica A. Goodheart","orcid":"https://orcid.org/0000-0003-0754-5751","observed_orcids":["https://orcid.org/0000-0003-0754-5751"]},"institutions":[{"id":"https://openalex.org/I1338124936","display_name":"American Museum of Natural History","ror":"https://ror.org/03thb3e06","country_code":"US","type":"archive","lineage":["https://openalex.org/I1338124936"]},{"id":"https://openalex.org/I150209017","display_name":"Scripps Institution of Oceanography","ror":"https://ror.org/04v7hvq31","country_code":"US","type":"facility","lineage":["https://openalex.org/I150209017","https://openalex.org/I36258959"]},{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jessica A. Goodheart","raw_affiliation_strings":["Division of Invertebrate Zoology, American Museum of Natural History, New York, NY, USA","Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA, USA","Division of Invertebrate Zoology, American Museum of Natural History, New York, NY, USA. jgoodheart@amnh.org","Richard Gilder Graduate School, American Museum of Natural History, New York, NY, USA. jgoodheart@amnh.org","Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA, USA. jgoodheart@amnh.org"],"raw_orcid":"https://orcid.org/0000-0003-0754-5751","affiliations":[{"raw_affiliation_string":"Division of Invertebrate Zoology, American Museum of Natural History, New York, NY, USA","institution_ids":["https://openalex.org/I1338124936"]},{"raw_affiliation_string":"Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA, USA","institution_ids":["https://openalex.org/I150209017","https://openalex.org/I36258959"]},{"raw_affiliation_string":"Division of Invertebrate Zoology, American Museum of Natural History, New York, NY, USA. jgoodheart@amnh.org","institution_ids":["https://openalex.org/I1338124936"]},{"raw_affiliation_string":"Richard Gilder Graduate School, American Museum of Natural History, New York, NY, USA. jgoodheart@amnh.org","institution_ids":["https://openalex.org/I1338124936"]},{"raw_affiliation_string":"Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA, USA. jgoodheart@amnh.org","institution_ids":["https://openalex.org/I150209017","https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109674846","display_name":"Rose A. Fiorenza","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I150209017","display_name":"Scripps Institution of Oceanography","ror":"https://ror.org/04v7hvq31","country_code":"US","type":"facility","lineage":["https://openalex.org/I150209017","https://openalex.org/I36258959"]},{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rose Fiorenza","raw_affiliation_strings":["Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA, USA","institution_ids":["https://openalex.org/I150209017","https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5092837688","display_name":"Robin A. Rio","orcid":"https://orcid.org/0009-0004-7936-0590","observed_orcids":["https://orcid.org/0009-0004-7936-0590"]},"institutions":[{"id":"https://openalex.org/I150209017","display_name":"Scripps Institution of Oceanography","ror":"https://ror.org/04v7hvq31","country_code":"US","type":"facility","lineage":["https://openalex.org/I150209017","https://openalex.org/I36258959"]},{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robin Rio","raw_affiliation_strings":["Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA, USA"],"raw_orcid":"https://orcid.org/0009-0004-7936-0590","affiliations":[{"raw_affiliation_string":"Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA, USA","institution_ids":["https://openalex.org/I150209017","https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025463539","display_name":"Rebecca N. Lopez\u2010Anido","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I1338124936","display_name":"American Museum of Natural History","ror":"https://ror.org/03thb3e06","country_code":"US","type":"archive","lineage":["https://openalex.org/I1338124936"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rebecca N. Lopez-Anido","raw_affiliation_strings":["Division of Invertebrate Zoology, American Museum of Natural History, New York, NY, USA","Richard Gilder Graduate School, American Museum of Natural History, New York, NY, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Invertebrate Zoology, American Museum of Natural History, New York, NY, USA","institution_ids":["https://openalex.org/I1338124936"]},{"raw_affiliation_string":"Richard Gilder Graduate School, American Museum of Natural History, New York, NY, USA","institution_ids":["https://openalex.org/I1338124936"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Noah J. Martin","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I1316194761","display_name":"Museum of Vertebrate Zoology","ror":"https://ror.org/01rdg4502","country_code":"US","type":"archive","lineage":["https://openalex.org/I1316194761"]},{"id":"https://openalex.org/I1338920048","display_name":"Marine Biological Laboratory","ror":"https://ror.org/046dg4z72","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1338920048"]},{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Noah J. Martin","raw_affiliation_strings":["Department of Integrative Biology, University of California, Berkeley, CA, USA","Marine Biological Laboratory, Woods Hole, MA, USA","Museum of Vertebrate Zoology, University of California, Berkeley, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Integrative Biology, University of California, Berkeley, CA, USA","institution_ids":["https://openalex.org/I95457486"]},{"raw_affiliation_string":"Marine Biological Laboratory, Woods Hole, MA, USA","institution_ids":["https://openalex.org/I1338920048"]},{"raw_affiliation_string":"Museum of Vertebrate Zoology, University of California, Berkeley, CA, USA","institution_ids":["https://openalex.org/I1316194761","https://openalex.org/I95457486"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5116298140","display_name":"Timothy J. Herrlinger","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Timothy J. Herrlinger","raw_affiliation_strings":["Department of Integrative Biology, University of California, Berkeley, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Integrative Biology, University of California, Berkeley, CA, USA","institution_ids":["https://openalex.org/I95457486"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006987293","display_name":"Rebecca D. Tarvin","orcid":"https://orcid.org/0000-0001-5387-7250","observed_orcids":["https://orcid.org/0000-0001-5387-7250"]},"institutions":[{"id":"https://openalex.org/I1316194761","display_name":"Museum of Vertebrate Zoology","ror":"https://ror.org/01rdg4502","country_code":"US","type":"archive","lineage":["https://openalex.org/I1316194761"]},{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rebecca D. Tarvin","raw_affiliation_strings":["Department of Integrative Biology, University of California, Berkeley, CA, USA","Museum of Vertebrate Zoology, University of California, Berkeley, CA, USA"],"raw_orcid":"https://orcid.org/0000-0001-5387-7250","affiliations":[{"raw_affiliation_string":"Department of Integrative Biology, University of California, Berkeley, CA, USA","institution_ids":["https://openalex.org/I95457486"]},{"raw_affiliation_string":"Museum of Vertebrate Zoology, University of California, Berkeley, CA, USA","institution_ids":["https://openalex.org/I1316194761","https://openalex.org/I95457486"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077284308","display_name":"Deirdre C. Lyons","orcid":"https://orcid.org/0000-0002-2644-5214","observed_orcids":["https://orcid.org/0000-0002-2644-5214"]},"institutions":[{"id":"https://openalex.org/I150209017","display_name":"Scripps Institution of Oceanography","ror":"https://ror.org/04v7hvq31","country_code":"US","type":"facility","lineage":["https://openalex.org/I150209017","https://openalex.org/I36258959"]},{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Deirdre C. Lyons","raw_affiliation_strings":["Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA, USA","institution_ids":["https://openalex.org/I150209017","https://openalex.org/I36258959"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5073700599"],"corresponding_institution_ids":["https://openalex.org/I1338124936","https://openalex.org/I150209017","https://openalex.org/I36258959"],"apc_list":{"value":2690,"currency":"USD","value_usd":2690},"apc_paid":{"value":2690,"currency":"USD","value_usd":2690},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.10927932,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"16","issue":"1","first_page":"10","last_page":"10"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12142","display_name":"Marine Invertebrate Physiology and Ecology","score":0.9071999788284302,"subfield":{"id":"https://openalex.org/subfields/1911","display_name":"Paleontology"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12142","display_name":"Marine Invertebrate Physiology and Ecology","score":0.9071999788284302,"subfield":{"id":"https://openalex.org/subfields/1911","display_name":"Paleontology"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11403","display_name":"Invertebrate Immune Response Mechanisms","score":0.07649999856948853,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11340","display_name":"Marine Sponges and Natural Products","score":0.0027000000700354576,"subfield":{"id":"https://openalex.org/subfields/1305","display_name":"Biotechnology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/phagocytosis","display_name":"phagocytosis","score":0.9300000071525574},{"id":"https://openalex.org/keywords/nudibranchs","display_name":"nudibranchs","score":0.8140000104904175},{"id":"https://openalex.org/keywords/berghia-stephanieae","display_name":"Berghia stephanieae","score":0.9819999933242798},{"id":"https://openalex.org/keywords/gene-expression","display_name":"gene expression","score":0.5669999718666077},{"id":"https://openalex.org/keywords/c-type-lectin-receptors","display_name":"C-type lectin receptors","score":0.9129999876022339},{"id":"https://openalex.org/keywords/collagen","display_name":"collagen","score":0.996999979019165},{"id":"https://openalex.org/keywords/immune-related-genes","display_name":"immune-related genes","score":0.6320000290870667},{"id":"https://openalex.org/keywords/endocytosis","display_name":"endocytosis","score":0.828000009059906},{"id":"https://openalex.org/keywords/tissue-specific-expression","display_name":"tissue-specific gene expression","score":0.46000000834465027}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8379160165786743},{"id":"https://openalex.org/C2777626736","wikidata":"https://www.wikidata.org/wiki/Q733595","display_name":"Nudibranch","level":3,"score":0.7222414612770081},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6229300498962402},{"id":"https://openalex.org/C160448771","wikidata":"https://www.wikidata.org/wiki/Q184726","display_name":"Phagocytosis","level":2,"score":0.6130922436714172},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.46970292925834656},{"id":"https://openalex.org/C2775935104","wikidata":"https://www.wikidata.org/wiki/Q6502673","display_name":"Planarian","level":3,"score":0.446231484413147},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.4338221848011017},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.29096218943595886},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.1389489471912384},{"id":"https://openalex.org/C2780252984","wikidata":"https://www.wikidata.org/wiki/Q4867740","display_name":"Gastropoda","level":2,"score":0.08182394504547119},{"id":"https://openalex.org/C171056886","wikidata":"https://www.wikidata.org/wiki/Q193119","display_name":"Regeneration (biology)","level":2,"score":0.07874137163162231}],"mesh":[],"locations_count":8,"locations":[{"id":"doi:10.1186/s13227-025-00241-x","doi":"https://doi.org/10.1186/s13227-025-00241-x","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13227-025-00241-x","pdf_url":"https://evodevojournal.biomedcentral.com/counter/pdf/10.1186/s13227-025-00241-x","source":{"id":"https://openalex.org/S128203929","display_name":"EvoDevo","issn_l":"2041-9139","issn":["2041-9139"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","norway-1","poland-100","russia-white-list-2"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"EvoDevo","raw_type":"journal-article"},{"id":"doi:10.1101/2025.02.13.637864","doi":"https://doi.org/10.1101/2025.02.13.637864","is_oa":true,"landing_page_url":"https://doi.org/10.1101/2025.02.13.637864","pdf_url":null,"source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},{"id":"pmh:oai:europepmc.org:11012723","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12205514","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:12205514","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12205514","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"EvoDevo","raw_type":"Text"},{"id":"pmid:40027626","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40027626","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"bioRxiv : the preprint server for biology","raw_type":"Journal Article"},{"id":"pmid:40581638","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40581638","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"EvoDevo","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:11870399","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11870399","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:7e0b97425aa54afa909e8b6e36f1e199","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/7e0b97425aa54afa909e8b6e36f1e199","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"EvoDevo, Vol 16, Iss 1, Pp 1-15 (2025)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s13227-025-00241-x","doi":"https://doi.org/10.1186/s13227-025-00241-x","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13227-025-00241-x","pdf_url":"https://evodevojournal.biomedcentral.com/counter/pdf/10.1186/s13227-025-00241-x","source":{"id":"https://openalex.org/S128203929","display_name":"EvoDevo","issn_l":"2041-9139","issn":["2041-9139"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","norway-1","poland-100","russia-white-list-2"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"EvoDevo","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Life below water","score":0.5769000053405762,"id":"https://metadata.un.org/sdg/14"}],"sustainable_development_goals_aurora":[{"display_name":"Life below water","score":0.5199999809265137,"id":"https://metadata.un.org/sdg/14"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G1695556235","display_name":"Pacific Biosciences PacBio RS Single Molecule Real Time Sequencer","funder_award_id":"1s10od018174-01","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G1742171491","display_name":null,"funder_award_id":"1548562","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G179862484","display_name":null,"funder_award_id":"ACI1548562","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G2206590661","display_name":null,"funder_award_id":"ACI-1548562","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3226045097","display_name":null,"funder_award_id":"ACI-1 548 562","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3725987964","display_name":"Berghia BRAIN project","funder_award_id":"1u01ns123972-01","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3730782400","display_name":"XSEDE 2.0:  Integrating, Enabling and Enhancing National Cyberinfrastructure with Expanding Community Involvement","funder_award_id":"1548562","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G4975449653","display_name":null,"funder_award_id":"S10 OD018174","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G5704499756","display_name":"A 5-dimensional connectomics approach to the neural basis of behavior","funder_award_id":"U01NS108637","funder_id":"https://openalex.org/F4320337359","funder_display_name":"National Institute of Neurological Disorders and Stroke"},{"id":"https://openalex.org/G6056929667","display_name":null,"funder_award_id":"1548562","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G6814457478","display_name":null,"funder_award_id":"S10 OD018174","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G9000900111","display_name":"Evolutionary genetics of adaptation to toxins in animals","funder_award_id":"R35GM150574","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320308760","display_name":"American Museum of Natural History","ror":"https://ror.org/03thb3e06"},{"id":"https://openalex.org/F4320309411","display_name":"University of California Berkeley","ror":"https://ror.org/01an7q238"},{"id":"https://openalex.org/F4320311680","display_name":"Society for Developmental Biology","ror":"https://ror.org/007jxr441"},{"id":"https://openalex.org/F4320314340","display_name":"Conchologists of America","ror":"https://ror.org/058mdpy54"},{"id":"https://openalex.org/F4320316545","display_name":"San Diego Supercomputer Center","ror":"https://ror.org/04mg3nk07"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320337359","display_name":"National Institute of Neurological Disorders and Stroke","ror":"https://ror.org/01s5ya894"},{"id":"https://openalex.org/F4631124499","display_name":"Scripps Institution of Oceanography","ror":"https://ror.org/04v7hvq31"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4411744950.pdf","grobid_xml":"https://content.openalex.org/works/W4411744950.grobid-xml"},"referenced_works_count":83,"referenced_works":["https://openalex.org/W20892824","https://openalex.org/W575069292","https://openalex.org/W1871204376","https://openalex.org/W1900937478","https://openalex.org/W1964163789","https://openalex.org/W1966661455","https://openalex.org/W1968131885","https://openalex.org/W1975456388","https://openalex.org/W1981307889","https://openalex.org/W1984535592","https://openalex.org/W2001777098","https://openalex.org/W2041569169","https://openalex.org/W2043701535","https://openalex.org/W2046142519","https://openalex.org/W2051503920","https://openalex.org/W2065343108","https://openalex.org/W2074396626","https://openalex.org/W2077946013","https://openalex.org/W2094046566","https://openalex.org/W2097519883","https://openalex.org/W2099258446","https://openalex.org/W2099572276","https://openalex.org/W2120024428","https://openalex.org/W2120394869","https://openalex.org/W2126740791","https://openalex.org/W2141780547","https://openalex.org/W2143177251","https://openalex.org/W2143524974","https://openalex.org/W2152168515","https://openalex.org/W2156125289","https://openalex.org/W2161903022","https://openalex.org/W2166572577","https://openalex.org/W2167279371","https://openalex.org/W2169456326","https://openalex.org/W2170551349","https://openalex.org/W2170747616","https://openalex.org/W2177656671","https://openalex.org/W2179438025","https://openalex.org/W2298512893","https://openalex.org/W2337522803","https://openalex.org/W2345067109","https://openalex.org/W2429031812","https://openalex.org/W2464213876","https://openalex.org/W2558155778","https://openalex.org/W2559733817","https://openalex.org/W2574998181","https://openalex.org/W2625489207","https://openalex.org/W2735754850","https://openalex.org/W2766328057","https://openalex.org/W2770775376","https://openalex.org/W2779406975","https://openalex.org/W2890955041","https://openalex.org/W2891959956","https://openalex.org/W2901226784","https://openalex.org/W2949193645","https://openalex.org/W2950495754","https://openalex.org/W2952985777","https://openalex.org/W2971850052","https://openalex.org/W2988396470","https://openalex.org/W2995102787","https://openalex.org/W2995784128","https://openalex.org/W3006709493","https://openalex.org/W3026927696","https://openalex.org/W3034732930","https://openalex.org/W3086752697","https://openalex.org/W3111663636","https://openalex.org/W3150495594","https://openalex.org/W3157774508","https://openalex.org/W3215682729","https://openalex.org/W4205771121","https://openalex.org/W4224000599","https://openalex.org/W4224253200","https://openalex.org/W4226054402","https://openalex.org/W4230715843","https://openalex.org/W4251710603","https://openalex.org/W4289260385","https://openalex.org/W4300962000","https://openalex.org/W4353094060","https://openalex.org/W4390937802","https://openalex.org/W4391048152","https://openalex.org/W4396770899","https://openalex.org/W4408510788","https://openalex.org/W6931256069"],"related_works":["https://openalex.org/W6958614999","https://openalex.org/W4224000599","https://openalex.org/W2559733817","https://openalex.org/W6966813205","https://openalex.org/W2901226784","https://openalex.org/W2152612842","https://openalex.org/W2403119545","https://openalex.org/W6921006680","https://openalex.org/W2028220303","https://openalex.org/W2472320653"],"abstract_inverted_index":{"BACKGROUND:":[0],"Phagocytosis":[1],"is":[2,25,41],"a":[3,17,155,161,187,201,209,251],"universal":[4],"physiological":[5],"process":[6,40],"in":[7,102,105,126,135,151,175,189,203,232,241,272],"eukaryotes":[8],"with":[9,98,111,123,165],"many":[10],"important":[11],"biological":[12],"functions.":[13],"In":[14],"nudibranch":[15,50],"gastropods,":[16],"novel":[18],"form":[19],"of":[20,30,75,143,212,253,269],"phagocytosis":[21,197],"called":[22],"nematocyst":[23,66],"sequestration":[24,67,190,205,271],"specialized":[26],"for":[27,264],"the":[28,47,62,72,204,245,262],"uptake":[29],"venomous":[31],"stinging":[32],"organelles":[33],"stolen":[34],"from":[35],"their":[36],"cnidarian":[37],"prey.":[38],"This":[39,259],"highly":[42],"selective.":[43],"Here":[44],"we":[45,137],"use":[46],"emerging":[48],"model":[49],"species":[51],"Berghia":[52],"stephanieae":[53],"and":[54,69,78,115,160,178,207,235,274],"Hermissenda":[55],"opalescens":[56,128],"to":[57,86,148,221,256],"identify":[58],"genes":[59,80,97,109,145,198,213,228],"enriched":[60],"within":[61],"body":[63],"regions":[64,84,104],"where":[65,88],"occurs,":[68],"investigate":[70],"how":[71],"expression":[73,101,240],"profile":[74],"phagocytosis,":[76,166],"immune,":[77],"digestive":[79,257],"differs":[81],"between":[82],"nematocyst-sequestering":[83],"relative":[85],"those":[87],"other":[89,275],"phagocytic":[90],"functions":[91,219],"occur.":[92],"RESULTS:":[93],"We":[94,224],"identified":[95],"166":[96],"significantly":[99],"higher":[100],"sequestering":[103,129,149,177,242,248],"B.":[106,152],"stephanieae,":[107,153],"including":[108,154],"associated":[110],"development,":[112],"membrane":[113],"transport,":[114],"metabolism.":[116],"Of":[117],"these,":[118],"at":[119,140],"least":[120,141],"31":[121],"overlap":[122],"transcripts":[124],"upregulated":[125],"H.":[127],"tissues.":[130,258],"Using":[131],"hybridization":[132],"chain":[133],"reaction":[134],"situs,":[136],"show":[138,226,250],"that":[139,182,196,208,227,247],"two":[142],"these":[144],"were":[146,172],"localized":[147],"cells":[150],"putative":[156],"C-type":[157],"lectin":[158],"receptor":[159],"collagen.":[162],"Genes":[163],"annotated":[164],"digestion,":[167],"or":[168],"immunity":[169],"GO":[170],"terms":[171],"often":[173],"expressed":[174],"both":[176],"non-sequestering":[179],"tissues,":[180,243],"suggesting":[181],"they":[183],"may":[184,216],"also":[185,225],"play":[186,200,217],"role":[188,202],"processes.":[191],"CONCLUSION:":[192],"Our":[193],"results":[194],"suggest":[195],"likely":[199],"phenotype,":[206],"small":[210],"subset":[211],"(e.g.,":[214],"collagen)":[215],"unique":[218],"yet":[220],"be":[222],"uncovered.":[223],"categorized":[229],"as":[230],"functioning":[231],"endocytosis,":[233],"immunity,":[234],"digestion":[236],"have":[237],"lower":[238],"overall":[239],"supporting":[244],"hypothesis":[246],"tissues":[249],"narrowing":[252],"function":[254],"compared":[255],"study":[260],"lays":[261],"foundation":[263],"further":[265],"inquiry":[266],"into":[267],"mechanisms":[268],"organelle":[270],"nudibranchs":[273],"organisms.":[276]},"counts_by_year":[],"updated_date":"2026-10-30T12:39:25.321706","created_date":"2025-10-10T00:00:00"}
