{"id":"https://openalex.org/W4411591908","doi":"https://doi.org/10.1101/2025.06.18.660456","title":"A Genetically Based Latitudinal Gradient in Aggressiveness of Root-Knot Nematode Populations on Tomato with the Mi-1 Resistance Gene","display_name":"A Genetically Based Latitudinal Gradient in Aggressiveness of Root-Knot Nematode Populations on Tomato with the Mi-1 Resistance Gene","publication_year":2025,"publication_date":"2025-06-24","ids":{"openalex":"https://openalex.org/W4411591908","doi":"https://doi.org/10.1101/2025.06.18.660456","pmid":"https://pubmed.ncbi.nlm.nih.gov/40667035","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/12262571"},"language":"en","primary_location":{"id":"doi:10.1101/2025.06.18.660456","doi":"https://doi.org/10.1101/2025.06.18.660456","is_oa":true,"landing_page_url":"https://doi.org/10.1101/2025.06.18.660456","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2025/06/24/2025.06.18.660456.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},"volume":null,"type":"preprint","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.biorxiv.org/content/biorxiv/early/2025/06/24/2025.06.18.660456.full.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5049359219","display_name":"Damaris Godinez-Vidal","orcid":"https://orcid.org/0000-0002-5983-7871","observed_orcids":["https://orcid.org/0000-0002-5983-7871"]},"institutions":[{"id":"https://openalex.org/I103635307","display_name":"University of California, Riverside","ror":"https://ror.org/03nawhv43","country_code":"US","type":"education","lineage":["https://openalex.org/I103635307"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Damaris Godinez-Vidal","raw_affiliation_strings":["Department of Nematology, University of California, Riverside, CA 92521, USA","Department of Nematology, University of California, Riverside, CA 9252, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Nematology, University of California, Riverside, CA 92521, USA","institution_ids":["https://openalex.org/I103635307"]},{"raw_affiliation_string":"Department of Nematology, University of California, Riverside, CA 9252, USA","institution_ids":["https://openalex.org/I103635307"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081730159","display_name":"Francisco Franco\u2010Navarro","orcid":"https://orcid.org/0009-0000-2391-9448","observed_orcids":["https://orcid.org/0009-0000-2391-9448"]},"institutions":[{"id":"https://openalex.org/I103635307","display_name":"University of California, Riverside","ror":"https://ror.org/03nawhv43","country_code":"US","type":"education","lineage":["https://openalex.org/I103635307"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Francisco Franco-Navarro","raw_affiliation_strings":["Department of Nematology, University of California, Riverside, CA 92521, USA","Department of Nematology, University of California, Riverside, CA 9252, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Nematology, University of California, Riverside, CA 92521, USA","institution_ids":["https://openalex.org/I103635307"]},{"raw_affiliation_string":"Department of Nematology, University of California, Riverside, CA 9252, USA","institution_ids":["https://openalex.org/I103635307"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111708548","display_name":"Scott Edwards","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I103635307","display_name":"University of California, Riverside","ror":"https://ror.org/03nawhv43","country_code":"US","type":"education","lineage":["https://openalex.org/I103635307"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Scott Edwards","raw_affiliation_strings":["Department of Nematology, University of California, Riverside, CA 92521, USA","Department of Nematology, University of California, Riverside, CA 9252, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Nematology, University of California, Riverside, CA 92521, USA","institution_ids":["https://openalex.org/I103635307"]},{"raw_affiliation_string":"Department of Nematology, University of California, Riverside, CA 9252, USA","institution_ids":["https://openalex.org/I103635307"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006042347","display_name":"Antoon T. Ploeg","orcid":"https://orcid.org/0000-0003-3961-3413","observed_orcids":["https://orcid.org/0000-0003-3961-3413"]},"institutions":[{"id":"https://openalex.org/I103635307","display_name":"University of California, Riverside","ror":"https://ror.org/03nawhv43","country_code":"US","type":"education","lineage":["https://openalex.org/I103635307"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Antoon T. Ploeg","raw_affiliation_strings":["Department of Nematology, University of California, Riverside, CA 92521, USA","Department of Nematology, University of California, Riverside, CA 9252, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Nematology, University of California, Riverside, CA 92521, USA","institution_ids":["https://openalex.org/I103635307"]},{"raw_affiliation_string":"Department of Nematology, University of California, Riverside, CA 9252, USA","institution_ids":["https://openalex.org/I103635307"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5023532647","display_name":"Simon Cornelis Groen","orcid":"https://orcid.org/0000-0003-4538-8865","observed_orcids":["https://orcid.org/0000-0003-4538-8865"]},"institutions":[{"id":"https://openalex.org/I103635307","display_name":"University of California, Riverside","ror":"https://ror.org/03nawhv43","country_code":"US","type":"education","lineage":["https://openalex.org/I103635307"]},{"id":"https://openalex.org/I4405278674","display_name":"Institute for Integrative Genome Biology","ror":"https://ror.org/00cpdm633","country_code":"US","type":"facility","lineage":["https://openalex.org/I103635307","https://openalex.org/I4405278674"]},{"id":"https://openalex.org/I4405279711","display_name":"Center for Plant Cell Biology","ror":"https://ror.org/01wwbfd82","country_code":"US","type":"facility","lineage":["https://openalex.org/I103635307","https://openalex.org/I4405279711"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Simon C. Groen","raw_affiliation_strings":["Center for Plant Cell Biology, Institute for Integrative Genome Biology, University of California Riverside, Riverside, CA 92521, USA","Department of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA","Department of Nematology, University of California, Riverside, CA 92521, USA","Department of Nematology, University of California, Riverside, CA 9252, USA"],"raw_orcid":"https://orcid.org/0000-0003-4538-8865","affiliations":[{"raw_affiliation_string":"Center for Plant Cell Biology, Institute for Integrative Genome Biology, University of California Riverside, Riverside, CA 92521, USA","institution_ids":["https://openalex.org/I103635307","https://openalex.org/I4405278674","https://openalex.org/I4405279711"]},{"raw_affiliation_string":"Department of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA","institution_ids":["https://openalex.org/I103635307"]},{"raw_affiliation_string":"Department of Nematology, University of California, Riverside, CA 92521, USA","institution_ids":["https://openalex.org/I103635307"]},{"raw_affiliation_string":"Department of Nematology, University of California, Riverside, CA 9252, USA","institution_ids":["https://openalex.org/I103635307"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5023532647"],"corresponding_institution_ids":["https://openalex.org/I103635307","https://openalex.org/I4405278674","https://openalex.org/I4405279711"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11179","display_name":"Nematode management and characterization studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11179","display_name":"Nematode management and characterization studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10135","display_name":"Insect-Plant Interactions and Control","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1109","display_name":"Insect Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12858","display_name":"Plant Disease Resistance and Genetics","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/root-knot-nematode","display_name":"root-knot nematode","score":0.9739999771118164},{"id":"https://openalex.org/keywords/meloidogyne-javanica","display_name":"Meloidogyne javanica","score":0.8880000114440918},{"id":"https://openalex.org/keywords/meloidogyne-incognita","display_name":"Meloidogyne incognita","score":1.0},{"id":"https://openalex.org/keywords/tomato","display_name":"tomato","score":0.8100000023841858},{"id":"https://openalex.org/keywords/aggression","display_name":"aggression","score":0.765999972820282},{"id":"https://openalex.org/keywords/latitudinal-gradient","display_name":"latitudinal gradient","score":0.9769999980926514},{"id":"https://openalex.org/keywords/reproduction-factor","display_name":"reproduction factor","score":0.6840000152587891},{"id":"https://openalex.org/keywords/genetic-variation","display_name":"genetic variation","score":0.5170000195503235},{"id":"https://openalex.org/keywords/processing-tomato","display_name":"processing tomato","score":0.6010000109672546},{"id":"https://openalex.org/keywords/california","display_name":"California","score":0.5730000138282776}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8960015773773193},{"id":"https://openalex.org/C197321923","wikidata":"https://www.wikidata.org/wiki/Q4886","display_name":"Cultivar","level":2,"score":0.7451032400131226},{"id":"https://openalex.org/C120804375","wikidata":"https://www.wikidata.org/wiki/Q587153","display_name":"Terra incognita","level":4,"score":0.6636152863502502},{"id":"https://openalex.org/C137580998","wikidata":"https://www.wikidata.org/wiki/Q235352","display_name":"Crop","level":2,"score":0.4985392093658447},{"id":"https://openalex.org/C2780617777","wikidata":"https://www.wikidata.org/wiki/Q628493","display_name":"Meloidogyne incognita","level":3,"score":0.47244101762771606},{"id":"https://openalex.org/C6557445","wikidata":"https://www.wikidata.org/wiki/Q173113","display_name":"Agronomy","level":1,"score":0.4495217204093933},{"id":"https://openalex.org/C2777451525","wikidata":"https://www.wikidata.org/wiki/Q224107","display_name":"Gall","level":2,"score":0.4481632709503174},{"id":"https://openalex.org/C59659247","wikidata":"https://www.wikidata.org/wiki/Q11990","display_name":"Reproduction","level":2,"score":0.4414312541484833},{"id":"https://openalex.org/C2778830712","wikidata":"https://www.wikidata.org/wiki/Q5185","display_name":"Nematode","level":2,"score":0.43994826078414917},{"id":"https://openalex.org/C122523270","wikidata":"https://www.wikidata.org/wiki/Q34027","display_name":"Latitude","level":2,"score":0.4345552623271942},{"id":"https://openalex.org/C2776207046","wikidata":"https://www.wikidata.org/wiki/Q2215256","display_name":"Root-knot nematode","level":3,"score":0.43248865008354187},{"id":"https://openalex.org/C126831891","wikidata":"https://www.wikidata.org/wiki/Q221673","display_name":"Host (biology)","level":2,"score":0.427263468503952},{"id":"https://openalex.org/C57473165","wikidata":"https://www.wikidata.org/wiki/Q7315604","display_name":"Resistance (ecology)","level":2,"score":0.4113064408302307},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.3853295147418976},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.21640068292617798},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1101/2025.06.18.660456","doi":"https://doi.org/10.1101/2025.06.18.660456","is_oa":true,"landing_page_url":"https://doi.org/10.1101/2025.06.18.660456","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2025/06/24/2025.06.18.660456.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},{"id":"pmid:40667035","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40667035","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"bioRxiv : the preprint server for biology","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:12262571","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12262571/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1101/2025.06.18.660456","doi":"https://doi.org/10.1101/2025.06.18.660456","is_oa":true,"landing_page_url":"https://doi.org/10.1101/2025.06.18.660456","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2025/06/24/2025.06.18.660456.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},"sustainable_development_goals":[{"display_name":"Zero hunger","score":0.991100013256073,"id":"https://metadata.un.org/sdg/2"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G1356030556","display_name":null,"funder_award_id":"W5186","funder_id":"https://openalex.org/F4320332299","funder_display_name":"National Institute of Food and Agriculture"},{"id":"https://openalex.org/G9000860933","display_name":"Evolutionary Systems Biology of Host-Parasite Interactions","funder_award_id":"R35GM151194","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332299","display_name":"National Institute of Food and Agriculture","ror":"https://ror.org/05qx3fv49"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4411591908.pdf","grobid_xml":"https://content.openalex.org/works/W4411591908.grobid-xml"},"referenced_works_count":26,"referenced_works":["https://openalex.org/W26271163","https://openalex.org/W194355368","https://openalex.org/W1537164502","https://openalex.org/W1875952274","https://openalex.org/W1988518246","https://openalex.org/W1989068790","https://openalex.org/W2004518184","https://openalex.org/W2054761221","https://openalex.org/W2063360678","https://openalex.org/W2076596455","https://openalex.org/W2110017782","https://openalex.org/W2118961958","https://openalex.org/W2127507396","https://openalex.org/W2128631149","https://openalex.org/W2144029853","https://openalex.org/W2172097832","https://openalex.org/W2308066056","https://openalex.org/W2508906180","https://openalex.org/W2788887047","https://openalex.org/W2951493739","https://openalex.org/W3193555883","https://openalex.org/W4387679405","https://openalex.org/W4391981850","https://openalex.org/W4399287029","https://openalex.org/W4401567833","https://openalex.org/W4406989718"],"related_works":["https://openalex.org/W7140276184","https://openalex.org/W6470076","https://openalex.org/W4281780657","https://openalex.org/W2113023818","https://openalex.org/W3193555883","https://openalex.org/W1500729089","https://openalex.org/W2058763304","https://openalex.org/W3013880810","https://openalex.org/W2128631149","https://openalex.org/W1986592010"],"abstract_inverted_index":{"Abstract":[0],"Tomato":[1],"is":[2,27],"a":[3,10,152,226],"food":[4],"crop":[5,242],"of":[6,13,20,31,73,86,165,179,209],"global":[7],"importance,":[8],"with":[9,196],"large":[11],"proportion":[12],"processing":[14,55,231],"tomatoes":[15],"produced":[16],"in":[17,118,126,132,147,206,223,229],"California.":[18],"One":[19,85],"the":[21,46,71,95,192,207,210],"main":[22],"problems":[23],"plaguing":[24],"tomato":[25,56,83,109,232],"production":[26],"infection":[28],"by":[29,45],"populations":[30,66,88,103,122,164,195,219],"root-knot":[32],"nematodes":[33],"(RKNs;":[34],"Meloidogyne":[35,64,218],"spp.)":[36],"that":[37,75,163,217],"can":[38,76],"evade":[39],"or":[40],"suppress":[41],"(\u2018break\u2019)":[42],"resistance":[43],"mediated":[44],"Mi-1":[47,82,108,182],"gene,":[48],"which":[49,184,234],"has":[50],"been":[51],"introgressed":[52],"into":[53],"most":[54],"cultivars.":[57,84],"In":[58],"this":[59],"study,":[60],"we":[61,113,150],"evaluate":[62],"fourteen":[63],"spp.":[65],"collected":[67],"from":[68,170],"fields":[69],"across":[70],"state":[72],"California":[74],"complete":[77],"their":[78],"life":[79],"cycle":[80],"on":[81,107,181],"these":[87,166,240],"was":[89,136],"identified":[90,151],"as":[91,97],"M.":[92,98],"javanica":[93],"and":[94,105,142,149,158],"others":[96],"incognita":[99],".":[100],"All":[101],"RKN":[102,168],"developed":[104],"reproduced":[106],"cultivar":[110],"\u2018Celebrity\u2019.":[111],"Although":[112],"did":[114],"not":[115],"observe":[116],"differences":[117,205],"gall":[119],"index":[120],"among":[121,138],"when":[123],"studied":[124],"together":[125],"greenhouse":[127],"conditions,":[128],"significant":[129,204],"quantitative":[130],"variation":[131,222],"reproduction":[133,159,199],"factor":[134,200],"values":[135,201],"apparent":[137],"them.":[139],"Several":[140],"pathogens":[141],"parasites":[143],"display":[144],"geographical":[145],"gradients":[146],"aggressiveness":[148,180,224],"negative":[153],"correlation":[154],"between":[155],"populations\u2019":[156],"latitudes-of-origin":[157],"factors.":[160],"This":[161],"suggests":[162],"thermophilic":[167],"species":[169],"lower":[171],"latitudes":[172],"tended":[173],"to":[174,188],"have":[175,236],"evolved":[176,220],"higher":[177],"levels":[178],"tomato,":[183],"may":[185,235],"be":[186],"linked":[187],"warmer":[189],"temperatures":[190],"throughout":[191],"year.":[193],"Finally,":[194],"relatively":[197],"low":[198],"still":[202],"showed":[203,216],"phenotypes":[208],"galls":[211],"they":[212],"induced.":[213],"Our":[214],"results":[215],"genetic":[221],"along":[225],"latitudinal":[227],"gradient":[228],"Californian":[230],"agroecosystems,":[233],"implications":[237],"for":[238],"managing":[239],"important":[241],"pests.":[243]},"counts_by_year":[{"year":2026,"cited_by_count":1}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2025-06-25T00:00:00"}
