{"id":"https://openalex.org/W4410973648","doi":"https://doi.org/10.1101/2025.05.30.657009","title":"A curated dataset and web application for Integrative Analysis of Ancient DNA from Britain and Ireland","display_name":"A curated dataset and web application for Integrative Analysis of Ancient DNA from Britain and Ireland","publication_year":2025,"publication_date":"2025-06-02","ids":{"openalex":"https://openalex.org/W4410973648","doi":"https://doi.org/10.1101/2025.05.30.657009"},"language":"en","primary_location":{"id":"doi:10.1101/2025.05.30.657009","doi":"https://doi.org/10.1101/2025.05.30.657009","is_oa":true,"landing_page_url":"https://doi.org/10.1101/2025.05.30.657009","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2025/06/02/2025.05.30.657009.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},"volume":null,"type":"preprint","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.biorxiv.org/content/biorxiv/early/2025/06/02/2025.05.30.657009.full.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044726552","display_name":"Sebasti\u00e1n Metz","orcid":"https://orcid.org/0000-0003-3353-8862","observed_orcids":["https://orcid.org/0000-0003-3353-8862"]},"institutions":[{"id":"https://openalex.org/I52099693","display_name":"University of York","ror":"https://ror.org/04m01e293","country_code":"GB","type":"education","lineage":["https://openalex.org/I52099693"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Sebastian Metz","raw_affiliation_strings":["Department of Archaeology, University of York, York, UK"],"raw_orcid":"https://orcid.org/0000-0003-3353-8862","affiliations":[{"raw_affiliation_string":"Department of Archaeology, University of York, York, UK","institution_ids":["https://openalex.org/I52099693"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016605728","display_name":"Claire-\u00c9lise Fischer","orcid":"https://orcid.org/0000-0003-4513-1031","observed_orcids":["https://orcid.org/0000-0003-4513-1031"]},"institutions":[{"id":"https://openalex.org/I78037679","display_name":"UiT The Arctic University of Norway","ror":"https://ror.org/00wge5k78","country_code":"NO","type":"education","lineage":["https://openalex.org/I78037679"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Claire-Elise Fischer","raw_affiliation_strings":["The Arctic University of Norway, Troms\u00f8, Norway"],"raw_orcid":"https://orcid.org/0000-0003-4513-1031","affiliations":[{"raw_affiliation_string":"The Arctic University of Norway, Troms\u00f8, Norway","institution_ids":["https://openalex.org/I78037679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083007550","display_name":"Madeleine Bleasdale","orcid":"https://orcid.org/0000-0002-8021-0862","observed_orcids":["https://orcid.org/0000-0002-8021-0862"]},"institutions":[{"id":"https://openalex.org/I52099693","display_name":"University of York","ror":"https://ror.org/04m01e293","country_code":"GB","type":"education","lineage":["https://openalex.org/I52099693"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Madeleine Bleasdale","raw_affiliation_strings":["Department of Archaeology, University of York, York, UK"],"raw_orcid":"https://orcid.org/0000-0002-8021-0862","affiliations":[{"raw_affiliation_string":"Department of Archaeology, University of York, York, UK","institution_ids":["https://openalex.org/I52099693"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034599431","display_name":"Laura Castells Navarro","orcid":"https://orcid.org/0000-0002-4239-8366","observed_orcids":["https://orcid.org/0000-0002-4239-8366"]},"institutions":[{"id":"https://openalex.org/I52099693","display_name":"University of York","ror":"https://ror.org/04m01e293","country_code":"GB","type":"education","lineage":["https://openalex.org/I52099693"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Laura Castells Navarro","raw_affiliation_strings":["Department of Archaeology, University of York, York, UK"],"raw_orcid":"https://orcid.org/0000-0002-4239-8366","affiliations":[{"raw_affiliation_string":"Department of Archaeology, University of York, York, UK","institution_ids":["https://openalex.org/I52099693"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035637491","display_name":"Lindsey B\u00fcster","orcid":"https://orcid.org/0000-0003-4121-9431","observed_orcids":["https://orcid.org/0000-0003-4121-9431"]},"institutions":[{"id":"https://openalex.org/I52099693","display_name":"University of York","ror":"https://ror.org/04m01e293","country_code":"GB","type":"education","lineage":["https://openalex.org/I52099693"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Lindsey B\u00fcster","raw_affiliation_strings":["Department of Archaeology, University of York, York, UK"],"raw_orcid":"https://orcid.org/0000-0003-4121-9431","affiliations":[{"raw_affiliation_string":"Department of Archaeology, University of York, York, UK","institution_ids":["https://openalex.org/I52099693"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Michael Legge","orcid":"https://orcid.org/0000-0002-6932-0278","observed_orcids":["https://orcid.org/0000-0002-6932-0278"]},"institutions":[{"id":"https://openalex.org/I52099693","display_name":"University of York","ror":"https://ror.org/04m01e293","country_code":"GB","type":"education","lineage":["https://openalex.org/I52099693"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Michael Legge","raw_affiliation_strings":["Department of Archaeology, University of York, York, UK"],"raw_orcid":"https://orcid.org/0000-0002-6932-0278","affiliations":[{"raw_affiliation_string":"Department of Archaeology, University of York, York, UK","institution_ids":["https://openalex.org/I52099693"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011819951","display_name":"David Reich","orcid":"https://orcid.org/0000-0002-7037-5292","observed_orcids":["https://orcid.org/0000-0002-7037-5292"]},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I1344073410","display_name":"Howard Hughes Medical Institute","ror":"https://ror.org/006w34k90","country_code":"US","type":"facility","lineage":["https://openalex.org/I1344073410"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David Reich","raw_affiliation_strings":["Broad Institute of MIT and Harvard, Cambridge, MA, USA","Department of Genetics, Harvard Medical School, Boston, MA, USA","Department of Human Evolutionary Biology, Harvard University, Cambridge, MA, USA","Howard Hughes Medical Institute, Harvard Medical School, Boston, MA, USA"],"raw_orcid":"https://orcid.org/0000-0002-7037-5292","affiliations":[{"raw_affiliation_string":"Broad Institute of MIT and Harvard, Cambridge, MA, USA","institution_ids":["https://openalex.org/I107606265"]},{"raw_affiliation_string":"Department of Genetics, Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I136199984"]},{"raw_affiliation_string":"Department of Human Evolutionary Biology, Harvard University, Cambridge, MA, USA","institution_ids":["https://openalex.org/I136199984"]},{"raw_affiliation_string":"Howard Hughes Medical Institute, Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1344073410","https://openalex.org/I136199984"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5055126751","display_name":"Ian Armit","orcid":"https://orcid.org/0000-0001-8669-3810","observed_orcids":["https://orcid.org/0000-0001-8669-3810"]},"institutions":[{"id":"https://openalex.org/I52099693","display_name":"University of York","ror":"https://ror.org/04m01e293","country_code":"GB","type":"education","lineage":["https://openalex.org/I52099693"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Ian Armit","raw_affiliation_strings":["Department of Archaeology, University of York, York, UK"],"raw_orcid":"https://orcid.org/0000-0001-8669-3810","affiliations":[{"raw_affiliation_string":"Department of Archaeology, University of York, York, UK","institution_ids":["https://openalex.org/I52099693"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5044726552"],"corresponding_institution_ids":["https://openalex.org/I52099693"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10751","display_name":"Forensic and Genetic Research","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10751","display_name":"Forensic and Genetic Research","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.0005000000237487257,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13409","display_name":"Paleopathology and ancient diseases","score":0.0003000000142492354,"subfield":{"id":"https://openalex.org/subfields/1204","display_name":"Archeology (arts and humanities)"},"field":{"id":"https://openalex.org/fields/12","display_name":"Arts and Humanities"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ancient-dna","display_name":"ancient DNA","score":0.8769999742507935},{"id":"https://openalex.org/keywords/ancient-human-genomes","display_name":"ancient human genomes","score":0.9679999947547913},{"id":"https://openalex.org/keywords/ancient-britain","display_name":"ancient Britain","score":0.4399999976158142},{"id":"https://openalex.org/keywords/ancient-ireland","display_name":"ancient Ireland","score":0.9779999852180481},{"id":"https://openalex.org/keywords/web-application","display_name":"web application","score":0.6079999804496765},{"id":"https://openalex.org/keywords/data-visualization","display_name":"data visualization","score":0.5519999861717224},{"id":"https://openalex.org/keywords/population-genomics","display_name":"population genomics","score":0.5149999856948853}],"concepts":[{"id":"https://openalex.org/C189338579","wikidata":"https://www.wikidata.org/wiki/Q290447","display_name":"Ancient DNA","level":3,"score":0.7224761247634888},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.4824260175228119},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4653400182723999},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.41344892978668213},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.39432305097579956},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.34713369607925415},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.302678644657135},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.12428325414657593},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.062007009983062744},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1101/2025.05.30.657009","doi":"https://doi.org/10.1101/2025.05.30.657009","is_oa":true,"landing_page_url":"https://doi.org/10.1101/2025.05.30.657009","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2025/06/02/2025.05.30.657009.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"}],"best_oa_location":{"id":"doi:10.1101/2025.05.30.657009","doi":"https://doi.org/10.1101/2025.05.30.657009","is_oa":true,"landing_page_url":"https://doi.org/10.1101/2025.05.30.657009","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2025/06/02/2025.05.30.657009.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G434337789","display_name":null,"funder_award_id":"HORIZON2020","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G459627573","display_name":"Communities and Connectivities: Iron Age Britons and their Continental Neighbours","funder_award_id":"834087","funder_id":"https://openalex.org/F4320338335","funder_display_name":"H2020 European Research Council"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320338335","display_name":"H2020 European Research Council","ror":"https://ror.org/0472cxd90"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4410973648.pdf","grobid_xml":"https://content.openalex.org/works/W4410973648.grobid-xml"},"referenced_works_count":30,"referenced_works":["https://openalex.org/W2050876420","https://openalex.org/W2050967443","https://openalex.org/W2108169091","https://openalex.org/W2166214412","https://openalex.org/W2199828298","https://openalex.org/W2252868201","https://openalex.org/W2272639154","https://openalex.org/W2342025013","https://openalex.org/W2612603061","https://openalex.org/W2938198947","https://openalex.org/W2938866104","https://openalex.org/W2952118993","https://openalex.org/W3036347945","https://openalex.org/W3087682297","https://openalex.org/W3126231830","https://openalex.org/W4200081848","https://openalex.org/W4200316056","https://openalex.org/W4210833840","https://openalex.org/W4290471561","https://openalex.org/W4293692933","https://openalex.org/W4296691256","https://openalex.org/W4311449828","https://openalex.org/W4365483636","https://openalex.org/W4377249938","https://openalex.org/W4390707638","https://openalex.org/W4391717697","https://openalex.org/W4392105516","https://openalex.org/W4396894710","https://openalex.org/W4399829896","https://openalex.org/W4410421482"],"related_works":["https://openalex.org/W4396894710","https://openalex.org/W3189453960","https://openalex.org/W4413369581","https://openalex.org/W7144031287","https://openalex.org/W7008803475","https://openalex.org/W4362698837","https://openalex.org/W7051675546","https://openalex.org/W4377290594","https://openalex.org/W2893635619","https://openalex.org/W4283735702"],"abstract_inverted_index":{"Abstract":[0],"In":[1],"recent":[2],"years,":[3],"genome-wide":[4,67],"data":[5,68,76],"from":[6,69],"thousands":[7],"of":[8,24],"ancient":[9,25,70,94],"human":[10,26],"remains":[11],"have":[12],"been":[13],"sequenced,":[14],"offering":[15],"unprecedented":[16],"insights":[17,42],"into":[18],"past":[19],"populations.":[20],"This":[21],"vast":[22],"dataset":[23,60],"genomes":[27],"and":[28,38,61,72,95],"their":[29],"associated":[30],"metadata":[31],"holds":[32],"immense":[33],"value":[34],"for":[35,50,65],"archaeologists,":[36],"anthropologists,":[37],"biologists.":[39],"However,":[40],"extracting":[41],"often":[43],"requires":[44],"advanced":[45],"bioinformatics":[46,100],"knowledge,":[47],"creating":[48],"barriers":[49],"non-experts.":[51],"To":[52],"address":[53],"this":[54],"challenge,":[55],"we":[56],"present":[57],"a":[58],"curated":[59],"user-friendly":[62],"web":[63],"application":[64],"published":[66],"Britain":[71],"Ireland,":[73],"including":[74],"new":[75],"produced":[77],"by":[78],"the":[79],"COMMIOS":[80],"Project.":[81],"The":[82],"platform":[83],"integrates":[84],"visualization":[85],"tools,":[86],"enabling":[87],"researchers":[88],"to":[89],"explore":[90],"genetic":[91],"connections":[92],"between":[93],"modern":[96],"populations":[97],"without":[98],"requiring":[99],"expertise.":[101]},"counts_by_year":[],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2025-10-10T00:00:00"}
