{"id":"https://openalex.org/W4408302000","doi":"https://doi.org/10.1186/s12864-025-11409-z","title":"Physiological, ionomic, transcriptomic and metabolomic analyses reveal molecular mechanisms of root adaption to salt stress in water spinach","display_name":"Physiological, ionomic, transcriptomic and metabolomic analyses reveal molecular mechanisms of root adaption to salt stress in water spinach","publication_year":2025,"publication_date":"2025-03-11","ids":{"openalex":"https://openalex.org/W4408302000","doi":"https://doi.org/10.1186/s12864-025-11409-z","pmid":"https://pubmed.ncbi.nlm.nih.gov/40069607"},"language":"en","primary_location":{"id":"doi:10.1186/s12864-025-11409-z","doi":"https://doi.org/10.1186/s12864-025-11409-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12864-025-11409-z","pdf_url":null,"source":{"id":"https://openalex.org/S28614077","display_name":"BMC Genomics","issn_l":"1471-2164","issn":["1471-2164"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Genomics","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1186/s12864-025-11409-z","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5069262224","display_name":"Zhenqin Li","orcid":"https://orcid.org/0000-0002-6895-0390","observed_orcids":["https://orcid.org/0000-0002-6895-0390"]},"institutions":[{"id":"https://openalex.org/I79223203","display_name":"Guangdong Ocean University","ror":"https://ror.org/0462wa640","country_code":"CN","type":"education","lineage":["https://openalex.org/I79223203"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhenqin Li","raw_affiliation_strings":["College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524088, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524088, China","institution_ids":["https://openalex.org/I79223203"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Long Cheng","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I79223203","display_name":"Guangdong Ocean University","ror":"https://ror.org/0462wa640","country_code":"CN","type":"education","lineage":["https://openalex.org/I79223203"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Long Cheng","raw_affiliation_strings":["College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524088, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524088, China","institution_ids":["https://openalex.org/I79223203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101352210","display_name":"Sitong Li","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I79223203","display_name":"Guangdong Ocean University","ror":"https://ror.org/0462wa640","country_code":"CN","type":"education","lineage":["https://openalex.org/I79223203"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Sitong Li","raw_affiliation_strings":["College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524088, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524088, China","institution_ids":["https://openalex.org/I79223203"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Guangcai Liu","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Guangcai Liu","raw_affiliation_strings":["Yangjiang Institute of Agricultural Sciences, Yangjiang Municipal Bureau of Agriculture and Rural Affairs, Yangjiang, 529800, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Yangjiang Institute of Agricultural Sciences, Yangjiang Municipal Bureau of Agriculture and Rural Affairs, Yangjiang, 529800, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100321837","display_name":"Sijia Liu","orcid":"https://orcid.org/0000-0002-4050-3548","observed_orcids":["https://orcid.org/0000-0002-4050-3548","https://orcid.org/0000-0003-3811-7370","https://orcid.org/0009-0003-0597-6184"]},"institutions":[{"id":"https://openalex.org/I79223203","display_name":"Guangdong Ocean University","ror":"https://ror.org/0462wa640","country_code":"CN","type":"education","lineage":["https://openalex.org/I79223203"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Sijia Liu","raw_affiliation_strings":["College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524088, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524088, China","institution_ids":["https://openalex.org/I79223203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100520746","display_name":"Duo Xu","orcid":"https://orcid.org/0000-0001-7880-9123","observed_orcids":["https://orcid.org/0000-0001-7880-9123"]},"institutions":[{"id":"https://openalex.org/I79223203","display_name":"Guangdong Ocean University","ror":"https://ror.org/0462wa640","country_code":"CN","type":"education","lineage":["https://openalex.org/I79223203"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Duo Xu","raw_affiliation_strings":["College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524088, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524088, China","institution_ids":["https://openalex.org/I79223203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104023754","display_name":"Rongchao Yang","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I79223203","display_name":"Guangdong Ocean University","ror":"https://ror.org/0462wa640","country_code":"CN","type":"education","lineage":["https://openalex.org/I79223203"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Rongchao Yang","raw_affiliation_strings":["College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524088, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524088, China","institution_ids":["https://openalex.org/I79223203"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Feng Feng","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I79223203","display_name":"Guangdong Ocean University","ror":"https://ror.org/0462wa640","country_code":"CN","type":"education","lineage":["https://openalex.org/I79223203"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Feng Feng","raw_affiliation_strings":["College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524088, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524088, China","institution_ids":["https://openalex.org/I79223203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051794852","display_name":"Junning Wang","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I79223203","display_name":"Guangdong Ocean University","ror":"https://ror.org/0462wa640","country_code":"CN","type":"education","lineage":["https://openalex.org/I79223203"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Junning Wang","raw_affiliation_strings":["College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524088, China. wangjunningb@126.com","College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524088, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524088, China. wangjunningb@126.com","institution_ids":["https://openalex.org/I79223203"]},{"raw_affiliation_string":"College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524088, China","institution_ids":["https://openalex.org/I79223203"]}]},{"author_position":"last","author":{"id":null,"display_name":"Chao Zheng","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I79223203","display_name":"Guangdong Ocean University","ror":"https://ror.org/0462wa640","country_code":"CN","type":"education","lineage":["https://openalex.org/I79223203"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Chao Zheng","raw_affiliation_strings":["College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524088, China. zhengchao@gdou.edu.cn","South China Branch of National Saline-Alkali Tolerant Rice Technology Innovation Center Zhanjiang, Zhanjiang, 524088, China. zhengchao@gdou.edu.cn","South China Branch of National Saline-Alkali Tolerant Rice Technology Innovation Center Zhanjiang, Zhanjiang, 524088, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524088, China. zhengchao@gdou.edu.cn","institution_ids":["https://openalex.org/I79223203"]},{"raw_affiliation_string":"South China Branch of National Saline-Alkali Tolerant Rice Technology Innovation Center Zhanjiang, Zhanjiang, 524088, China. zhengchao@gdou.edu.cn","institution_ids":[]},{"raw_affiliation_string":"South China Branch of National Saline-Alkali Tolerant Rice Technology Innovation Center Zhanjiang, Zhanjiang, 524088, China","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5051794852"],"corresponding_institution_ids":["https://openalex.org/I79223203"],"apc_list":{"value":3090,"currency":"USD","value_usd":3090},"apc_paid":{"value":3090,"currency":"USD","value_usd":3090},"fwci":6.5046,"has_fulltext":false,"cited_by_count":13,"citation_normalized_percentile":{"value":0.97025385,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"26","issue":"1","first_page":"231","last_page":"231"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10014","display_name":"Plant Stress Responses and Tolerance","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10014","display_name":"Plant Stress Responses and Tolerance","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11247","display_name":"Plant nutrient uptake and metabolism","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/water-spinach","display_name":"water spinach","score":1.0},{"id":"https://openalex.org/keywords/salt-stress","display_name":"salt stress","score":0.9800000190734863},{"id":"https://openalex.org/keywords/salt-tolerance","display_name":"salt tolerance","score":0.9179999828338623},{"id":"https://openalex.org/keywords/root-adaptation","display_name":"root adaptation","score":0.9509999752044678},{"id":"https://openalex.org/keywords/na-k-homeostasis","display_name":"Na+/K+ homeostasis","score":0.8429999947547913},{"id":"https://openalex.org/keywords/oxidative-stress","display_name":"oxidative stress","score":0.7429999709129333},{"id":"https://openalex.org/keywords/proline-accumulation","display_name":"proline accumulation","score":0.6600000262260437},{"id":"https://openalex.org/keywords/starch-and-sucrose-metabolism","display_name":"starch and sucrose metabolism","score":0.9039999842643738},{"id":"https://openalex.org/keywords/galactose-metabolism","display_name":"galactose metabolism","score":0.9959999918937683},{"id":"https://openalex.org/keywords/amylose","display_name":"amylose","score":0.6639999747276306},{"id":"https://openalex.org/keywords/osmotic-equilibrium","display_name":"osmotic balance","score":0.9229999780654907},{"id":"https://openalex.org/keywords/transcription-factors","display_name":"transcription factors","score":0.875}],"concepts":[{"id":"https://openalex.org/C21565614","wikidata":"https://www.wikidata.org/wiki/Q12149006","display_name":"Metabolomics","level":2,"score":0.8202100992202759},{"id":"https://openalex.org/C2780054949","wikidata":"https://www.wikidata.org/wiki/Q1421117","display_name":"Spinach","level":2,"score":0.7719956040382385},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7715365290641785},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.7137027382850647},{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.5241925120353699},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4487876892089844},{"id":"https://openalex.org/C2983671280","wikidata":"https://www.wikidata.org/wiki/Q5376358","display_name":"Water stress","level":2,"score":0.4413546025753021},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.4391384422779083},{"id":"https://openalex.org/C135870905","wikidata":"https://www.wikidata.org/wiki/Q903667","display_name":"Metabolome","level":3,"score":0.42481136322021484},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.37473171949386597},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2853527069091797},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2651973366737366},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.24502131342887878},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1742391288280487},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.1339922547340393}],"mesh":[{"descriptor_ui":"D000077323","descriptor_name":"Salt Stress","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077323","descriptor_name":"Salt Stress","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077323","descriptor_name":"Salt Stress","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000077323","descriptor_name":"Salt Stress","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000077323","descriptor_name":"Salt Stress","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000222","descriptor_name":"Adaptation, Physiological","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000222","descriptor_name":"Adaptation, Physiological","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":true},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":true},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D018724","descriptor_name":"Spinacia oleracea","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D018724","descriptor_name":"Spinacia oleracea","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D018724","descriptor_name":"Spinacia oleracea","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D018724","descriptor_name":"Spinacia oleracea","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D018724","descriptor_name":"Spinacia oleracea","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D018724","descriptor_name":"Spinacia oleracea","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D018724","descriptor_name":"Spinacia oleracea","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D018724","descriptor_name":"Spinacia oleracea","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D018724","descriptor_name":"Spinacia oleracea","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D027741","descriptor_name":"Ipomoea","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D027741","descriptor_name":"Ipomoea","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D027741","descriptor_name":"Ipomoea","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D027741","descriptor_name":"Ipomoea","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D027741","descriptor_name":"Ipomoea","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D027741","descriptor_name":"Ipomoea","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D055049","descriptor_name":"Salt Tolerance","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D055049","descriptor_name":"Salt Tolerance","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D055049","descriptor_name":"Salt Tolerance","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D055049","descriptor_name":"Salt Tolerance","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D055049","descriptor_name":"Salt Tolerance","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055442","descriptor_name":"Metabolome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055442","descriptor_name":"Metabolome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12864-025-11409-z","doi":"https://doi.org/10.1186/s12864-025-11409-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12864-025-11409-z","pdf_url":null,"source":{"id":"https://openalex.org/S28614077","display_name":"BMC Genomics","issn_l":"1471-2164","issn":["1471-2164"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Genomics","raw_type":"journal-article"},{"id":"pmid:40069607","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40069607","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC genomics","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:11895166","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11895166","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Genomics","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:1430da268e484751b4905e57226fd5ae","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/1430da268e484751b4905e57226fd5ae","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Genomics, Vol 26, Iss 1, Pp 1-16 (2025)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s12864-025-11409-z","doi":"https://doi.org/10.1186/s12864-025-11409-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12864-025-11409-z","pdf_url":null,"source":{"id":"https://openalex.org/S28614077","display_name":"BMC Genomics","issn_l":"1471-2164","issn":["1471-2164"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Genomics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Zero hunger","id":"https://metadata.un.org/sdg/2","score":0.8409000039100647}],"sustainable_development_goals_aurora":[{"display_name":"Clean water and sanitation","id":"https://metadata.un.org/sdg/6","score":0.8399999737739563}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":56,"referenced_works":["https://openalex.org/W1799149880","https://openalex.org/W1966327575","https://openalex.org/W1969854389","https://openalex.org/W1973230703","https://openalex.org/W1975473360","https://openalex.org/W1987198662","https://openalex.org/W2020957341","https://openalex.org/W2036586152","https://openalex.org/W2038670297","https://openalex.org/W2044702934","https://openalex.org/W2050714645","https://openalex.org/W2067195869","https://openalex.org/W2070247886","https://openalex.org/W2102174517","https://openalex.org/W2105379011","https://openalex.org/W2145800004","https://openalex.org/W2148717014","https://openalex.org/W2155758352","https://openalex.org/W2271473799","https://openalex.org/W2468268680","https://openalex.org/W2611268919","https://openalex.org/W2626537321","https://openalex.org/W2734699300","https://openalex.org/W2738558790","https://openalex.org/W2763363189","https://openalex.org/W2767572395","https://openalex.org/W2903314906","https://openalex.org/W2908969116","https://openalex.org/W2995995964","https://openalex.org/W2997719778","https://openalex.org/W3010798294","https://openalex.org/W3028375769","https://openalex.org/W3032077561","https://openalex.org/W3043053580","https://openalex.org/W3043851678","https://openalex.org/W3097983988","https://openalex.org/W3107115432","https://openalex.org/W3118585758","https://openalex.org/W3127068649","https://openalex.org/W3133323839","https://openalex.org/W3145111577","https://openalex.org/W3193477528","https://openalex.org/W3195819790","https://openalex.org/W3197776404","https://openalex.org/W3208364360","https://openalex.org/W3217390472","https://openalex.org/W4220923753","https://openalex.org/W4280530469","https://openalex.org/W4367322926","https://openalex.org/W4376648641","https://openalex.org/W4379647034","https://openalex.org/W4387514054","https://openalex.org/W4388784600","https://openalex.org/W4391243556","https://openalex.org/W4403703154","https://openalex.org/W6812688460"],"related_works":["https://openalex.org/W1996644818","https://openalex.org/W1965468642","https://openalex.org/W2093500216","https://openalex.org/W2053588008","https://openalex.org/W3101161779","https://openalex.org/W423371831","https://openalex.org/W2916376502","https://openalex.org/W2777729175","https://openalex.org/W2260452057","https://openalex.org/W4295779760"],"abstract_inverted_index":{"Water":[0],"spinach":[1,40],"(Ipomoea":[2],"aquatica":[3],"Forsk.)":[4],"is":[5,16],"an":[6],"important":[7],"leaf":[8],"vegetable":[9],"affected":[10],"by":[11],"salt":[12,20,157,169],"stress,":[13,170],"however,":[14],"little":[15],"known":[17],"about":[18],"its":[19],"adaption":[21],"mechanism.":[22],"Here,":[23],"we":[24],"integrated":[25],"physiomics,":[26],"ionomics,":[27],"transcriptomics,":[28],"and":[29,44,66,68,73,85,113,129,142,145],"metabolomics":[30],"to":[31,89,96,138,149,156,168],"analyze":[32],"the":[33,61,91,174],"root":[34],"adaptation":[35],"response":[36,155,167],"of":[37,63,93,177],"two":[38],"water":[39,178],"varieties,":[41],"BG":[42,58,80,124],"(salt-tolerant)":[43],"MF":[45],"(salt-sensitive),":[46],"at":[47],"150":[48],"mM":[49],"NaCl.":[50],"The":[51],"results":[52],"showed":[53],"that":[54,79,105,123],"compared":[55,95],"with":[56],"MF,":[57],"significantly":[59,81],"reduced":[60,82],"content":[62],"malondialdehyde":[64],"(MDA)":[65],"H2O2,":[67],"increased":[69,86,143],"catalase":[70],"(CAT)":[71],"activity":[72],"proline":[74],"content.":[75],"Ionome":[76],"analysis":[77,102],"demonstrated":[78],"Na+":[83],"accumulation":[84],"K+":[87],"level":[88],"reduce":[90],"toxicity":[92],"Na+,":[94],"MF.":[97],"Weighted":[98],"gene":[99],"co-expression":[100],"network":[101],"(WGCNA)":[103],"revealed":[104,122],"key":[106,126],"transcription":[107],"factors":[108],"such":[109],"as":[110,132,134],"HSFA4A,":[111],"bHLH093,":[112],"IDD7,":[114],"which":[115,171],"were":[116],"only":[117],"up-regulated":[118],"in":[119,154,166],"BG.":[120],"Multi-omics":[121],"reprogrammed":[125],"pathways:":[127],"starch":[128],"sucrose":[130,144],"metabolism,":[131,136],"well":[133],"galactose":[135,146],"leading":[137],"decreased":[139],"amylose":[140],"production":[141],"levels,":[147],"helping":[148],"maintain":[150],"cellular":[151],"osmotic":[152],"balance":[153],"stress.":[158],"These":[159],"findings":[160],"provide":[161],"insight":[162],"into":[163],"transcriptional":[164],"regulation":[165],"could":[172],"advance":[173],"genetic":[175],"enhancement":[176],"spinach.":[179]},"counts_by_year":[{"year":2026,"cited_by_count":10},{"year":2025,"cited_by_count":3}],"updated_date":"2026-10-17T09:40:24.721904","created_date":"2025-10-10T00:00:00"}
