{"id":"https://openalex.org/W4405374580","doi":"https://doi.org/10.3390/ijms252413380","title":"Comparative Transcriptomic Analysis and Candidate Gene Identification for Wild Rice (GZW) and Cultivated Rice (R998) Under Low-Temperature Stress","display_name":"Comparative Transcriptomic Analysis and Candidate Gene Identification for Wild Rice (GZW) and Cultivated Rice (R998) Under Low-Temperature Stress","publication_year":2024,"publication_date":"2024-12-13","ids":{"openalex":"https://openalex.org/W4405374580","doi":"https://doi.org/10.3390/ijms252413380","pmid":"https://pubmed.ncbi.nlm.nih.gov/39769145","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/11676510"},"language":"en","primary_location":{"id":"doi:10.3390/ijms252413380","doi":"https://doi.org/10.3390/ijms252413380","is_oa":true,"landing_page_url":"https://doi.org/10.3390/ijms252413380","pdf_url":null,"source":{"id":"https://openalex.org/S10623703","display_name":"International Journal of Molecular Sciences","issn_l":"1422-0067","issn":["1422-0067","1661-6596"],"is_oa":true,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","medline","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Molecular Sciences","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.3390/ijms252413380","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5029728886","display_name":"Yongmei Yu","orcid":"https://orcid.org/0000-0001-7394-8079","observed_orcids":["https://orcid.org/0000-0001-7394-8079"]},"institutions":[{"id":"https://openalex.org/I101479585","display_name":"South China Agricultural University","ror":"https://ror.org/05v9jqt67","country_code":"CN","type":"education","lineage":["https://openalex.org/I101479585"]},{"id":"https://openalex.org/I4210090603","display_name":"Rice Research Institute","ror":"https://ror.org/00c11v577","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"]},{"id":"https://openalex.org/I4210099004","display_name":"Guangdong Academy of Agricultural Sciences","ror":"https://ror.org/01rkwtz72","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yongmei Yu","raw_affiliation_strings":["College of Agriculture, South China Agricultural University, Guangzhou 510642, China","Rice Research Institute, Guangdong Academy of Agricultural Sciences/South China High-Quality Rice Breeding Laboratory (Jointly Established by Ministry of Agriculture and Rural Affairs and Provincial Government)/Guangdong Key Laboratory of Rice Science and Technology/Guangdong Rice Engineering Laboratory, Guangzhou 510640, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Agriculture, South China Agricultural University, Guangzhou 510642, China","institution_ids":["https://openalex.org/I101479585"]},{"raw_affiliation_string":"Rice Research Institute, Guangdong Academy of Agricultural Sciences/South China High-Quality Rice Breeding Laboratory (Jointly Established by Ministry of Agriculture and Rural Affairs and Provincial Government)/Guangdong Key Laboratory of Rice Science and Technology/Guangdong Rice Engineering Laboratory, Guangzhou 510640, China","institution_ids":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001980782","display_name":"Dilin Liu","orcid":"https://orcid.org/0000-0002-8290-3734","observed_orcids":["https://orcid.org/0000-0002-8290-3734","https://orcid.org/0000-0003-2912-6072"]},"institutions":[{"id":"https://openalex.org/I4210090603","display_name":"Rice Research Institute","ror":"https://ror.org/00c11v577","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"]},{"id":"https://openalex.org/I4210099004","display_name":"Guangdong Academy of Agricultural Sciences","ror":"https://ror.org/01rkwtz72","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Dilin Liu","raw_affiliation_strings":["Rice Research Institute, Guangdong Academy of Agricultural Sciences/South China High-Quality Rice Breeding Laboratory (Jointly Established by Ministry of Agriculture and Rural Affairs and Provincial Government)/Guangdong Key Laboratory of Rice Science and Technology/Guangdong Rice Engineering Laboratory, Guangzhou 510640, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Rice Research Institute, Guangdong Academy of Agricultural Sciences/South China High-Quality Rice Breeding Laboratory (Jointly Established by Ministry of Agriculture and Rural Affairs and Provincial Government)/Guangdong Key Laboratory of Rice Science and Technology/Guangdong Rice Engineering Laboratory, Guangzhou 510640, China","institution_ids":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Feng Wang","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210090603","display_name":"Rice Research Institute","ror":"https://ror.org/00c11v577","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"]},{"id":"https://openalex.org/I4210099004","display_name":"Guangdong Academy of Agricultural Sciences","ror":"https://ror.org/01rkwtz72","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Feng Wang","raw_affiliation_strings":["Rice Research Institute, Guangdong Academy of Agricultural Sciences/South China High-Quality Rice Breeding Laboratory (Jointly Established by Ministry of Agriculture and Rural Affairs and Provincial Government)/Guangdong Key Laboratory of Rice Science and Technology/Guangdong Rice Engineering Laboratory, Guangzhou 510640, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Rice Research Institute, Guangdong Academy of Agricultural Sciences/South China High-Quality Rice Breeding Laboratory (Jointly Established by Ministry of Agriculture and Rural Affairs and Provincial Government)/Guangdong Key Laboratory of Rice Science and Technology/Guangdong Rice Engineering Laboratory, Guangzhou 510640, China","institution_ids":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Le Kong","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210090603","display_name":"Rice Research Institute","ror":"https://ror.org/00c11v577","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"]},{"id":"https://openalex.org/I4210099004","display_name":"Guangdong Academy of Agricultural Sciences","ror":"https://ror.org/01rkwtz72","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Le Kong","raw_affiliation_strings":["Rice Research Institute, Guangdong Academy of Agricultural Sciences/South China High-Quality Rice Breeding Laboratory (Jointly Established by Ministry of Agriculture and Rural Affairs and Provincial Government)/Guangdong Key Laboratory of Rice Science and Technology/Guangdong Rice Engineering Laboratory, Guangzhou 510640, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Rice Research Institute, Guangdong Academy of Agricultural Sciences/South China High-Quality Rice Breeding Laboratory (Jointly Established by Ministry of Agriculture and Rural Affairs and Provincial Government)/Guangdong Key Laboratory of Rice Science and Technology/Guangdong Rice Engineering Laboratory, Guangzhou 510640, China","institution_ids":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032466146","display_name":"Yanhui Lin","orcid":"https://orcid.org/0000-0002-8866-6792","observed_orcids":["https://orcid.org/0000-0002-8866-6792"]},"institutions":[{"id":"https://openalex.org/I4210110948","display_name":"Hainan Provincial Academy of Agricultural Sciences","ror":"https://ror.org/026ktg130","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210110948"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yanhui Lin","raw_affiliation_strings":["Institute of Food Crops, Hainan Academy of Agricultural Sciences, Haikou 571100, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Food Crops, Hainan Academy of Agricultural Sciences, Haikou 571100, China","institution_ids":["https://openalex.org/I4210110948"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079107816","display_name":"Leiqing Chen","orcid":"https://orcid.org/0009-0001-9394-6609","observed_orcids":["https://orcid.org/0009-0001-9394-6609"]},"institutions":[{"id":"https://openalex.org/I4210090603","display_name":"Rice Research Institute","ror":"https://ror.org/00c11v577","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"]},{"id":"https://openalex.org/I4210099004","display_name":"Guangdong Academy of Agricultural Sciences","ror":"https://ror.org/01rkwtz72","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Leiqing Chen","raw_affiliation_strings":["Rice Research Institute, Guangdong Academy of Agricultural Sciences/South China High-Quality Rice Breeding Laboratory (Jointly Established by Ministry of Agriculture and Rural Affairs and Provincial Government)/Guangdong Key Laboratory of Rice Science and Technology/Guangdong Rice Engineering Laboratory, Guangzhou 510640, China"],"raw_orcid":"https://orcid.org/0009-0001-9394-6609","affiliations":[{"raw_affiliation_string":"Rice Research Institute, Guangdong Academy of Agricultural Sciences/South China High-Quality Rice Breeding Laboratory (Jointly Established by Ministry of Agriculture and Rural Affairs and Provincial Government)/Guangdong Key Laboratory of Rice Science and Technology/Guangdong Rice Engineering Laboratory, Guangzhou 510640, China","institution_ids":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038738121","display_name":"Wenjing Jiang","orcid":"https://orcid.org/0000-0002-1559-9744","observed_orcids":["https://orcid.org/0000-0002-1559-9744"]},"institutions":[{"id":"https://openalex.org/I101479585","display_name":"South China Agricultural University","ror":"https://ror.org/05v9jqt67","country_code":"CN","type":"education","lineage":["https://openalex.org/I101479585"]},{"id":"https://openalex.org/I4210090603","display_name":"Rice Research Institute","ror":"https://ror.org/00c11v577","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"]},{"id":"https://openalex.org/I4210099004","display_name":"Guangdong Academy of Agricultural Sciences","ror":"https://ror.org/01rkwtz72","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wenjing Jiang","raw_affiliation_strings":["College of Agriculture, South China Agricultural University, Guangzhou 510642, China","Rice Research Institute, Guangdong Academy of Agricultural Sciences/South China High-Quality Rice Breeding Laboratory (Jointly Established by Ministry of Agriculture and Rural Affairs and Provincial Government)/Guangdong Key Laboratory of Rice Science and Technology/Guangdong Rice Engineering Laboratory, Guangzhou 510640, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Agriculture, South China Agricultural University, Guangzhou 510642, China","institution_ids":["https://openalex.org/I101479585"]},{"raw_affiliation_string":"Rice Research Institute, Guangdong Academy of Agricultural Sciences/South China High-Quality Rice Breeding Laboratory (Jointly Established by Ministry of Agriculture and Rural Affairs and Provincial Government)/Guangdong Key Laboratory of Rice Science and Technology/Guangdong Rice Engineering Laboratory, Guangzhou 510640, China","institution_ids":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Xueru Hou","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210090603","display_name":"Rice Research Institute","ror":"https://ror.org/00c11v577","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"]},{"id":"https://openalex.org/I4210099004","display_name":"Guangdong Academy of Agricultural Sciences","ror":"https://ror.org/01rkwtz72","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xueru Hou","raw_affiliation_strings":["Rice Research Institute, Guangdong Academy of Agricultural Sciences/South China High-Quality Rice Breeding Laboratory (Jointly Established by Ministry of Agriculture and Rural Affairs and Provincial Government)/Guangdong Key Laboratory of Rice Science and Technology/Guangdong Rice Engineering Laboratory, Guangzhou 510640, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Rice Research Institute, Guangdong Academy of Agricultural Sciences/South China High-Quality Rice Breeding Laboratory (Jointly Established by Ministry of Agriculture and Rural Affairs and Provincial Government)/Guangdong Key Laboratory of Rice Science and Technology/Guangdong Rice Engineering Laboratory, Guangzhou 510640, China","institution_ids":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Yanxia Xiao","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I101479585","display_name":"South China Agricultural University","ror":"https://ror.org/05v9jqt67","country_code":"CN","type":"education","lineage":["https://openalex.org/I101479585"]},{"id":"https://openalex.org/I4210090603","display_name":"Rice Research Institute","ror":"https://ror.org/00c11v577","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"]},{"id":"https://openalex.org/I4210099004","display_name":"Guangdong Academy of Agricultural Sciences","ror":"https://ror.org/01rkwtz72","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yanxia Xiao","raw_affiliation_strings":["College of Agriculture, South China Agricultural University, Guangzhou 510642, China","Rice Research Institute, Guangdong Academy of Agricultural Sciences/South China High-Quality Rice Breeding Laboratory (Jointly Established by Ministry of Agriculture and Rural Affairs and Provincial Government)/Guangdong Key Laboratory of Rice Science and Technology/Guangdong Rice Engineering Laboratory, Guangzhou 510640, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Agriculture, South China Agricultural University, Guangzhou 510642, China","institution_ids":["https://openalex.org/I101479585"]},{"raw_affiliation_string":"Rice Research Institute, Guangdong Academy of Agricultural Sciences/South China High-Quality Rice Breeding Laboratory (Jointly Established by Ministry of Agriculture and Rural Affairs and Provincial Government)/Guangdong Key Laboratory of Rice Science and Technology/Guangdong Rice Engineering Laboratory, Guangzhou 510640, China","institution_ids":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Gongzhen Fu","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I101479585","display_name":"South China Agricultural University","ror":"https://ror.org/05v9jqt67","country_code":"CN","type":"education","lineage":["https://openalex.org/I101479585"]},{"id":"https://openalex.org/I4210090603","display_name":"Rice Research Institute","ror":"https://ror.org/00c11v577","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"]},{"id":"https://openalex.org/I4210099004","display_name":"Guangdong Academy of Agricultural Sciences","ror":"https://ror.org/01rkwtz72","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Gongzhen Fu","raw_affiliation_strings":["College of Agriculture, South China Agricultural University, Guangzhou 510642, China","Rice Research Institute, Guangdong Academy of Agricultural Sciences/South China High-Quality Rice Breeding Laboratory (Jointly Established by Ministry of Agriculture and Rural Affairs and Provincial Government)/Guangdong Key Laboratory of Rice Science and Technology/Guangdong Rice Engineering Laboratory, Guangzhou 510640, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Agriculture, South China Agricultural University, Guangzhou 510642, China","institution_ids":["https://openalex.org/I101479585"]},{"raw_affiliation_string":"Rice Research Institute, Guangdong Academy of Agricultural Sciences/South China High-Quality Rice Breeding Laboratory (Jointly Established by Ministry of Agriculture and Rural Affairs and Provincial Government)/Guangdong Key Laboratory of Rice Science and Technology/Guangdong Rice Engineering Laboratory, Guangzhou 510640, China","institution_ids":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057360846","display_name":"Wuge Liu","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210090603","display_name":"Rice Research Institute","ror":"https://ror.org/00c11v577","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"]},{"id":"https://openalex.org/I4210099004","display_name":"Guangdong Academy of Agricultural Sciences","ror":"https://ror.org/01rkwtz72","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099004"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Wuge Liu","raw_affiliation_strings":["Rice Research Institute, Guangdong Academy of Agricultural Sciences/South China High-Quality Rice Breeding Laboratory (Jointly Established by Ministry of Agriculture and Rural Affairs and Provincial Government)/Guangdong Key Laboratory of Rice Science and Technology/Guangdong Rice Engineering Laboratory, Guangzhou 510640, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Rice Research Institute, Guangdong Academy of Agricultural Sciences/South China High-Quality Rice Breeding Laboratory (Jointly Established by Ministry of Agriculture and Rural Affairs and Provincial Government)/Guangdong Key Laboratory of Rice Science and Technology/Guangdong Rice Engineering Laboratory, Guangzhou 510640, China","institution_ids":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5038937432","display_name":"Xing Huo","orcid":"https://orcid.org/0000-0001-6306-742X","observed_orcids":["https://orcid.org/0000-0001-6306-742X"]},"institutions":[{"id":"https://openalex.org/I4210090603","display_name":"Rice Research Institute","ror":"https://ror.org/00c11v577","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"]},{"id":"https://openalex.org/I4210099004","display_name":"Guangdong Academy of Agricultural Sciences","ror":"https://ror.org/01rkwtz72","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099004"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xing Huo","raw_affiliation_strings":["Rice Research Institute, Guangdong Academy of Agricultural Sciences/South China High-Quality Rice Breeding Laboratory (Jointly Established by Ministry of Agriculture and Rural Affairs and Provincial Government)/Guangdong Key Laboratory of Rice Science and Technology/Guangdong Rice Engineering Laboratory, Guangzhou 510640, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Rice Research Institute, Guangdong Academy of Agricultural Sciences/South China High-Quality Rice Breeding Laboratory (Jointly Established by Ministry of Agriculture and Rural Affairs and Provincial Government)/Guangdong Key Laboratory of Rice Science and Technology/Guangdong Rice Engineering Laboratory, Guangzhou 510640, China","institution_ids":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5038937432","https://openalex.org/A5057360846"],"corresponding_institution_ids":["https://openalex.org/I4210090603","https://openalex.org/I4210099004"],"apc_list":{"value":2900,"currency":"CHF","value_usd":3296},"apc_paid":{"value":2900,"currency":"CHF","value_usd":3296},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.0,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"25","issue":"24","first_page":"13380","last_page":"13380"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10014","display_name":"Plant Stress Responses and Tolerance","score":0.8711000084877014,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10014","display_name":"Plant Stress Responses and Tolerance","score":0.8711000084877014,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12045","display_name":"Rice Cultivation and Yield Improvement","score":0.1136000007390976,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.003000000026077032,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cold-stress","display_name":"cold stress","score":0.8149999976158142},{"id":"https://openalex.org/keywords/cold-tolerance","display_name":"cold tolerance","score":0.9940000176429749},{"id":"https://openalex.org/keywords/wild-rice","display_name":"wild rice","score":0.8339999914169312},{"id":"https://openalex.org/keywords/indica-rice","display_name":"Indica rice","score":0.8199999928474426},{"id":"https://openalex.org/keywords/comparative-transcriptomics","display_name":"comparative transcriptomics","score":0.7409999966621399},{"id":"https://openalex.org/keywords/differentially-expressed-genes","display_name":"differentially expressed genes","score":0.9190000295639038},{"id":"https://openalex.org/keywords/candidate-genes","display_name":"candidate genes","score":0.8159999847412109},{"id":"https://openalex.org/keywords/transcription-factors","display_name":"transcription factors","score":0.7900000214576721},{"id":"https://openalex.org/keywords/gene-regulatory-networks","display_name":"gene regulatory networks","score":0.9300000071525574},{"id":"https://openalex.org/keywords/phenylalanine-metabolism","display_name":"phenylalanine metabolism","score":0.9779999852180481},{"id":"https://openalex.org/keywords/photosynthesis","display_name":"photosynthesis","score":0.8600000143051147},{"id":"https://openalex.org/keywords/plant-hormone-signaling","display_name":"plant hormone signaling","score":0.8849999904632568},{"id":"https://openalex.org/keywords/starch-and-sucrose-metabolism","display_name":"starch and sucrose metabolism","score":0.9660000205039978},{"id":"https://openalex.org/keywords/rice-breeding","display_name":"rice breeding","score":0.3059999942779541}],"concepts":[{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.7330827116966248},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6656754612922668},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6054482460021973},{"id":"https://openalex.org/C197321923","wikidata":"https://www.wikidata.org/wiki/Q4886","display_name":"Cultivar","level":2,"score":0.5175749063491821},{"id":"https://openalex.org/C2776800236","wikidata":"https://www.wikidata.org/wiki/Q3614286","display_name":"Starch synthase","level":5,"score":0.5062031149864197},{"id":"https://openalex.org/C107397762","wikidata":"https://www.wikidata.org/wiki/Q2542347","display_name":"RNA-Seq","level":5,"score":0.4726090729236603},{"id":"https://openalex.org/C183688256","wikidata":"https://www.wikidata.org/wiki/Q11982","display_name":"Photosynthesis","level":2,"score":0.4661271572113037},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.44692039489746094},{"id":"https://openalex.org/C529335014","wikidata":"https://www.wikidata.org/wiki/Q41534","display_name":"Starch","level":2,"score":0.4296583831310272},{"id":"https://openalex.org/C144027150","wikidata":"https://www.wikidata.org/wiki/Q48803","display_name":"Horticulture","level":1,"score":0.429252028465271},{"id":"https://openalex.org/C14168384","wikidata":"https://www.wikidata.org/wiki/Q16305538","display_name":"Subtropics","level":2,"score":0.41553449630737305},{"id":"https://openalex.org/C2776335000","wikidata":"https://www.wikidata.org/wiki/Q2322484","display_name":"Sasa","level":2,"score":0.41289305686950684},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.36527204513549805},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.30756089091300964},{"id":"https://openalex.org/C2776804113","wikidata":"https://www.wikidata.org/wiki/Q207466","display_name":"Amylose","level":3,"score":0.21102896332740784},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.20852389931678772},{"id":"https://openalex.org/C2776414723","wikidata":"https://www.wikidata.org/wiki/Q271643","display_name":"Amylopectin","level":4,"score":0.1270032525062561},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.09036222100257874}],"mesh":[{"descriptor_ui":"D003080","descriptor_name":"Cold Temperature","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012275","descriptor_name":"Oryza","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D058639","descriptor_name":"Cold-Shock Response","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.3390/ijms252413380","doi":"https://doi.org/10.3390/ijms252413380","is_oa":true,"landing_page_url":"https://doi.org/10.3390/ijms252413380","pdf_url":null,"source":{"id":"https://openalex.org/S10623703","display_name":"International Journal of Molecular Sciences","issn_l":"1422-0067","issn":["1422-0067","1661-6596"],"is_oa":true,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","medline","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Molecular Sciences","raw_type":"journal-article"},{"id":"pmh:oai:pubmedcentral.nih.gov:11676510","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11676510","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11676510/pdf/","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Int J Mol Sci","raw_type":"Text"},{"id":"pmid:39769145","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39769145","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International journal of molecular sciences","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.3390/ijms252413380","doi":"https://doi.org/10.3390/ijms252413380","is_oa":true,"landing_page_url":"https://doi.org/10.3390/ijms252413380","pdf_url":null,"source":{"id":"https://openalex.org/S10623703","display_name":"International Journal of Molecular Sciences","issn_l":"1422-0067","issn":["1422-0067","1661-6596"],"is_oa":true,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","medline","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Molecular Sciences","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger","score":0.9208999872207642}],"study_designs":[],"awards":[{"id":"https://openalex.org/G4025648869","display_name":null,"funder_award_id":"2022YFF1002600","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"}],"funders":[{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4405374580.pdf","grobid_xml":"https://content.openalex.org/works/W4405374580.grobid-xml"},"referenced_works_count":60,"referenced_works":["https://openalex.org/W1964044431","https://openalex.org/W1966327575","https://openalex.org/W2035618305","https://openalex.org/W2039457567","https://openalex.org/W2042192966","https://openalex.org/W2053267259","https://openalex.org/W2062557806","https://openalex.org/W2107277218","https://openalex.org/W2114360920","https://openalex.org/W2123037553","https://openalex.org/W2153775758","https://openalex.org/W2155932116","https://openalex.org/W2159675211","https://openalex.org/W2523303540","https://openalex.org/W2754421996","https://openalex.org/W2770033860","https://openalex.org/W2776449119","https://openalex.org/W2801996557","https://openalex.org/W2887017180","https://openalex.org/W2895913191","https://openalex.org/W2899250708","https://openalex.org/W2915237172","https://openalex.org/W2916434842","https://openalex.org/W2919170320","https://openalex.org/W2951912016","https://openalex.org/W3095587678","https://openalex.org/W3108205658","https://openalex.org/W3119010472","https://openalex.org/W3195700689","https://openalex.org/W3199843417","https://openalex.org/W3200706955","https://openalex.org/W3203638183","https://openalex.org/W4214704886","https://openalex.org/W4292184135","https://openalex.org/W4296280350","https://openalex.org/W4296935148","https://openalex.org/W4310706085","https://openalex.org/W4318275380","https://openalex.org/W4319014132","https://openalex.org/W4319081216","https://openalex.org/W4323287378","https://openalex.org/W4381480438","https://openalex.org/W4385854596","https://openalex.org/W4386417663","https://openalex.org/W4387439796","https://openalex.org/W4387935471","https://openalex.org/W4388964093","https://openalex.org/W4389552648","https://openalex.org/W4389803608","https://openalex.org/W4389894772","https://openalex.org/W4390226800","https://openalex.org/W4391542233","https://openalex.org/W4391755245","https://openalex.org/W4398252789","https://openalex.org/W4401015031","https://openalex.org/W4401044555","https://openalex.org/W4401374777","https://openalex.org/W4401715945","https://openalex.org/W4401728557","https://openalex.org/W4401944746"],"related_works":["https://openalex.org/W3047103747","https://openalex.org/W2968536930","https://openalex.org/W650727605","https://openalex.org/W2702724973","https://openalex.org/W4327846215","https://openalex.org/W7123342167","https://openalex.org/W2924479594","https://openalex.org/W3093263189","https://openalex.org/W2549010295","https://openalex.org/W3000797412"],"abstract_inverted_index":{"Rice":[0],"is":[1,24,31],"a":[2,54,70,116,256,299],"short-day":[3],"thermophilic":[4],"crop":[5],"that":[6,132,185],"originated":[7],"from":[8],"the":[9,13,38,95,104,128,133,139,146,165,172,200,218,307,321],"low":[10,27],"latitudes":[11],"of":[12,41,82,94,127,208,242,287,306,310,323],"tropics":[14],"and":[15,36,65,69,92,103,110,124,180,182,213,226,228,269,291,315],"subtropics;":[16],"it":[17,30],"requires":[18],"high":[19,100],"temperatures":[20],"for":[21,302,320],"growth":[22],"but":[23,193],"sensitive":[25],"to":[26,34,46,274],"temperatures.":[28],"Therefore,":[29],"highly":[32],"important":[33],"explore":[35],"analyze":[37],"molecular":[39,308],"mechanism":[40,309],"cold":[42],"tolerance":[43,276,312,325],"in":[44,61,135,148,164,171,199,217,251,277,293,313,326],"rice":[45,48,63,67,278,314],"expand":[47],"planting":[49],"areas.":[50],"Here,":[51],"we":[52],"report":[53],"phenotypic":[55],"evaluation":[56],"based":[57],"on":[58],"low-temperature":[59,83,101,136,149,204,275,311,324],"stress":[60],"indica":[62],"(R998)":[64],"wild":[66],"(GZW)":[68],"comparative":[71],"transcriptomic":[72],"study":[73,322],"conducted":[74],"at":[75,85,195],"six":[76],"time":[77,197],"points.":[78],"After":[79],"7":[80],"days":[81],"treatment":[84,150],"10":[86,244],"\u00b0C,":[87],"R998":[88,166,179],"exhibited":[89,99,111],"obvious":[90],"yellowing":[91],"greening":[93],"leaves,":[96],"while":[97],"GZW":[98,114,173],"resistance,":[102],"leaves":[105],"maintained":[106],"their":[107],"normal":[108],"morphology":[109],"no":[112],"yellowing;":[113],"has":[115],"higher":[117],"survival":[118],"rate.":[119],"Principal":[120],"component":[121],"analysis":[122,126,156,267],"(PCA)":[123],"cluster":[125],"RNA-seq":[129],"data":[130],"revealed":[131,157],"difference":[134,147],"resistance":[137],"between":[138,178,191],"two":[140],"cultivars":[141,192],"was":[142,260,289],"caused":[143],"mainly":[144],"by":[145],"after":[151],"6":[152],"h.":[153],"Differential":[154],"expression":[155],"2615":[158],"unique":[159,169,176],"differentially":[160,187],"expressed":[161,188],"genes":[162,237,272,283],"(DEGs)":[163],"material,":[167,174],"1578":[168],"DEGs":[170,177,184,210,234],"1874":[175],"GZW,":[181],"2699":[183],"were":[186,211,214,279],"not":[189],"only":[190],"also":[194],"different":[196],"points":[198],"same":[201],"material":[202],"under":[203],"treatment.":[205],"A":[206],"total":[207],"15,712":[209,233],"detected":[212],"significantly":[215],"enriched":[216],"phenylalanine":[219],"metabolism,":[220],"photosynthesis,":[221],"plant":[222],"hormone":[223],"signal":[224],"transduction,":[225],"starch":[227],"sucrose":[229],"metabolism":[230],"pathways.":[231],"These":[232,296],"included":[235],"1937":[236],"encoding":[238,284],"transcription":[239],"factors":[240],"(TFs),":[241],"which":[243,288],"have":[245],"been":[246],"identified":[247,290],"with":[248],"functional":[249],"validation":[250],"previous":[252,294],"studies.":[253,295],"In":[254],"addition,":[255],"gene":[257,264],"regulatory":[258],"network":[259,266],"constructed":[261],"via":[262],"weighted":[263],"correlation":[265],"(WGCNA),":[268],"12":[270],"key":[271],"related":[273],"identified,":[280],"including":[281],"five":[282],"TFs,":[285],"one":[286],"verified":[292],"results":[297],"provide":[298,316],"theoretical":[300],"basis":[301],"an":[303],"in-depth":[304],"understanding":[305],"new":[317],"genetic":[318],"resources":[319],"rice.":[327]},"counts_by_year":[],"updated_date":"2026-11-12T12:28:57.059296","created_date":"2024-12-14T00:00:00"}
