{"id":"https://openalex.org/W4401439769","doi":"https://doi.org/10.1002/2211-5463.13868/v3/response1","title":"Author response for \"Complete pipeline for Oxford Nanopore Technology amplicon sequencing ( ONT \u2010 AmpSeq ): from pre\u2010processing to creating an operational taxonomic unit table\"","display_name":"Author response for \"Complete pipeline for Oxford Nanopore Technology amplicon sequencing ( ONT \u2010 AmpSeq ): from pre\u2010processing to creating an operational taxonomic unit table\"","publication_year":2024,"publication_date":"2024-07-04","ids":{"openalex":"https://openalex.org/W4401439769","doi":"https://doi.org/10.1002/2211-5463.13868/v3/response1"},"language":"en","primary_location":{"id":"doi:10.1002/2211-5463.13868/v3/response1","doi":"https://doi.org/10.1002/2211-5463.13868/v3/response1","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1002/2211-5463.13868/v3/response1","pdf_url":null,"source":{"id":"https://openalex.org/S4363604615","display_name":"Publons reviews and discussion","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"peer-review"},"volume":null,"type":"peer-review","is_traditional":false,"indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5106348519","display_name":"Patrick Skov Schacksen","orcid":"https://orcid.org/0000-0002-3850-4971","observed_orcids":["https://orcid.org/0000-0002-3850-4971"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Patrick Skov Schacksen","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085607146","display_name":"Stine Karstenskov \u00d8stergaard","orcid":"https://orcid.org/0009-0001-1092-0826","observed_orcids":["https://orcid.org/0009-0001-1092-0826"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Stine Karstenskov \u00d8stergaard","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5094047838","display_name":"Mathias Helmer Eskildsen","orcid":"https://orcid.org/0009-0000-1503-3399","observed_orcids":["https://orcid.org/0009-0000-1503-3399"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mathias Helmer Eskildsen","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5047257173","display_name":"Jeppe Lund Nielsen","orcid":"https://orcid.org/0000-0002-8747-6938","observed_orcids":["https://orcid.org/0000-0002-8747-6938","https://orcid.org/0000-0002-6402-1877"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jeppe Lund Nielsen","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9613999724388123,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9613999724388123,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12640","display_name":"Environmental DNA in Biodiversity Studies","score":0.020999999716877937,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.004600000102072954,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/oxford-nanopore-sequencing","display_name":"Oxford Nanopore sequencing","score":0.8949999809265137},{"id":"https://openalex.org/keywords/amplicon-sequencing","display_name":"amplicon sequencing","score":0.9860000014305115},{"id":"https://openalex.org/keywords/otu-table","display_name":"OTU table","score":0.5960000157356262},{"id":"https://openalex.org/keywords/bioinformatics-pipeline","display_name":"bioinformatics pipeline","score":0.7950000166893005},{"id":"https://openalex.org/keywords/data-preprocessing","display_name":"data preprocessing","score":0.7129999995231628},{"id":"https://openalex.org/keywords/operational-taxonomic-units","display_name":"operational taxonomic units","score":0.8560000061988831}],"concepts":[{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.5857182145118713},{"id":"https://openalex.org/C8185291","wikidata":"https://www.wikidata.org/wiki/Q2844457","display_name":"Amplicon","level":4,"score":0.5518697500228882},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.46366292238235474},{"id":"https://openalex.org/C153911025","wikidata":"https://www.wikidata.org/wiki/Q7202","display_name":"Molecular biology","level":1,"score":0.36124899983406067},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3201349377632141},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.23718851804733276},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2173001766204834},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.20743337273597717},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08366715908050537},{"id":"https://openalex.org/C49105822","wikidata":"https://www.wikidata.org/wiki/Q176996","display_name":"Polymerase chain reaction","level":3,"score":0.04785579442977905}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1002/2211-5463.13868/v3/response1","doi":"https://doi.org/10.1002/2211-5463.13868/v3/response1","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1002/2211-5463.13868/v3/response1","pdf_url":null,"source":{"id":"https://openalex.org/S4363604615","display_name":"Publons reviews and discussion","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"peer-review"}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4401396308","https://openalex.org/W6892180738","https://openalex.org/W3045106064","https://openalex.org/W3187845260","https://openalex.org/W2919601071","https://openalex.org/W7166572353","https://openalex.org/W4303685756","https://openalex.org/W7212208222","https://openalex.org/W7166545873","https://openalex.org/W3114701182"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-10-28T10:33:24.094632","created_date":"2024-08-09T00:00:00"}