{"id":"https://openalex.org/W4400107946","doi":"https://doi.org/10.33866/phytopathol.036.01.1053","title":"USE OF GENE SEQUENCING, SOIL CHEMICAL PROPERTIES AND MICROBIAL ANALYSIS TO CONFIRM THE NATURE OF THE SUGARCANE DISEASE PHYTOPLASMAS IN THAILAND","display_name":"USE OF GENE SEQUENCING, SOIL CHEMICAL PROPERTIES AND MICROBIAL ANALYSIS TO CONFIRM THE NATURE OF THE SUGARCANE DISEASE PHYTOPLASMAS IN THAILAND","publication_year":2024,"publication_date":"2024-06-28","ids":{"openalex":"https://openalex.org/W4400107946","doi":"https://doi.org/10.33866/phytopathol.036.01.1053"},"language":"en","primary_location":{"id":"doi:10.33866/phytopathol.036.01.1053","doi":"https://doi.org/10.33866/phytopathol.036.01.1053","is_oa":true,"landing_page_url":"https://doi.org/10.33866/phytopathol.036.01.1053","pdf_url":null,"source":{"id":"https://openalex.org/S2764392852","display_name":"Pakistan Journal of Phytopathology","issn_l":"1019-763X","issn":["1019-763X","2305-0284"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":["poland-20","russia-white-list-3"],"host_organization":"https://openalex.org/I4405266440","host_organization_name":"Pakistan Phytopathological Society","host_organization_lineage":["https://openalex.org/I4405266440"],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Pakistan Journal of Phytopathology","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://doi.org/10.33866/phytopathol.036.01.1053","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5008202869","display_name":"Parisatcha Sangsuwan","orcid":"https://orcid.org/0000-0002-0796-1694","observed_orcids":["https://orcid.org/0000-0002-0796-1694"]},"institutions":[{"id":"https://openalex.org/I4210148892","display_name":"Thepsatri Rajabhat University","ror":"https://ror.org/05a61hj73","country_code":"TH","type":"education","lineage":["https://openalex.org/I4210148892"]}],"countries":["TH"],"is_corresponding":false,"raw_author_name":"Parisatcha Sangsuwan","raw_affiliation_strings":["Biology Department, Faculty of Science and Technology, Thepsatri Rajabhat University, Lopburi"],"raw_orcid":"https://orcid.org/0000-0002-0796-1694","affiliations":[{"raw_affiliation_string":"Biology Department, Faculty of Science and Technology, Thepsatri Rajabhat University, Lopburi","institution_ids":["https://openalex.org/I4210148892"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035020970","display_name":"Janejira Detraksa","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210148892","display_name":"Thepsatri Rajabhat University","ror":"https://ror.org/05a61hj73","country_code":"TH","type":"education","lineage":["https://openalex.org/I4210148892"]}],"countries":["TH"],"is_corresponding":false,"raw_author_name":"Janejira Detraksa","raw_affiliation_strings":["Biology Department, Faculty of Science and Technology, Thepsatri Rajabhat University, Lopburi"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biology Department, Faculty of Science and Technology, Thepsatri Rajabhat University, Lopburi","institution_ids":["https://openalex.org/I4210148892"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023451307","display_name":"Napatsorn Notesiri","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Napatsorn Notesiri","raw_affiliation_strings":["Office of Science for Land Development, Land Development Department, Bangkok"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Office of Science for Land Development, Land Development Department, Bangkok","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5042030007","display_name":"Matthew J. Dickinson","orcid":"https://orcid.org/0000-0002-7614-2609","observed_orcids":["https://orcid.org/0000-0002-7614-2609"]},"institutions":[{"id":"https://openalex.org/I142263535","display_name":"University of Nottingham","ror":"https://ror.org/01ee9ar58","country_code":"GB","type":"education","lineage":["https://openalex.org/I142263535"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Matthew Dickinson","raw_affiliation_strings":["School of Bioscience, Sutton Bonington Campus, Nottingham University, Loughborough"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Bioscience, Sutton Bonington Campus, Nottingham University, Loughborough","institution_ids":["https://openalex.org/I142263535"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.0,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"36","issue":"1","first_page":"75","last_page":"86"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11750","display_name":"Phytoplasmas and Hemiptera pathogens","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11750","display_name":"Phytoplasmas and Hemiptera pathogens","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11578","display_name":"Plant Pathogenic Bacteria Studies","score":0.00019999999494757503,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12134","display_name":"Insect symbiosis and bacterial influences","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/1109","display_name":"Insect Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/16s-rrna-gene","display_name":"16S rRNA gene","score":0.7139999866485596},{"id":"https://openalex.org/keywords/seca-gene","display_name":"secA gene","score":0.9670000076293945},{"id":"https://openalex.org/keywords/soil-chemical-properties","display_name":"soil chemical properties","score":0.7239999771118164},{"id":"https://openalex.org/keywords/rhizosphere-microorganisms","display_name":"rhizosphere microorganisms","score":0.9639999866485596},{"id":"https://openalex.org/keywords/symptom-variability","display_name":"symptom variability","score":0.527999997138977},{"id":"https://openalex.org/keywords/thailand","display_name":"Thailand","score":0.8090000152587891}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8193027973175049},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.49744704365730286},{"id":"https://openalex.org/C6557445","wikidata":"https://www.wikidata.org/wiki/Q173113","display_name":"Agronomy","level":1,"score":0.48871684074401855},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.43267709016799927},{"id":"https://openalex.org/C150903083","wikidata":"https://www.wikidata.org/wiki/Q7108","display_name":"Biotechnology","level":1,"score":0.3883812725543976},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.37912288308143616},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.20661532878875732}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.33866/phytopathol.036.01.1053","doi":"https://doi.org/10.33866/phytopathol.036.01.1053","is_oa":true,"landing_page_url":"https://doi.org/10.33866/phytopathol.036.01.1053","pdf_url":null,"source":{"id":"https://openalex.org/S2764392852","display_name":"Pakistan Journal of Phytopathology","issn_l":"1019-763X","issn":["1019-763X","2305-0284"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":["poland-20","russia-white-list-3"],"host_organization":"https://openalex.org/I4405266440","host_organization_name":"Pakistan Phytopathological Society","host_organization_lineage":["https://openalex.org/I4405266440"],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Pakistan Journal of Phytopathology","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.33866/phytopathol.036.01.1053","doi":"https://doi.org/10.33866/phytopathol.036.01.1053","is_oa":true,"landing_page_url":"https://doi.org/10.33866/phytopathol.036.01.1053","pdf_url":null,"source":{"id":"https://openalex.org/S2764392852","display_name":"Pakistan Journal of Phytopathology","issn_l":"1019-763X","issn":["1019-763X","2305-0284"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":["poland-20","russia-white-list-3"],"host_organization":"https://openalex.org/I4405266440","host_organization_name":"Pakistan Phytopathological Society","host_organization_lineage":["https://openalex.org/I4405266440"],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Pakistan Journal of Phytopathology","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6875,"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":39,"referenced_works":["https://openalex.org/W1800190270","https://openalex.org/W1991076345","https://openalex.org/W2001044166","https://openalex.org/W2026382025","https://openalex.org/W2036647435","https://openalex.org/W2061975194","https://openalex.org/W2062569473","https://openalex.org/W2069231793","https://openalex.org/W2074869294","https://openalex.org/W2078418415","https://openalex.org/W2086251290","https://openalex.org/W2099656668","https://openalex.org/W2111348995","https://openalex.org/W2128933736","https://openalex.org/W2129340011","https://openalex.org/W2133701090","https://openalex.org/W2134894145","https://openalex.org/W2146151847","https://openalex.org/W2155751053","https://openalex.org/W2157230268","https://openalex.org/W2186342365","https://openalex.org/W2206445450","https://openalex.org/W2317147305","https://openalex.org/W2519703394","https://openalex.org/W2520994135","https://openalex.org/W2564298244","https://openalex.org/W2586819673","https://openalex.org/W2590315510","https://openalex.org/W2610680691","https://openalex.org/W2792150318","https://openalex.org/W2914524262","https://openalex.org/W2991179990","https://openalex.org/W2992371070","https://openalex.org/W3020979385","https://openalex.org/W3100394696","https://openalex.org/W3112344114","https://openalex.org/W3119896634","https://openalex.org/W4254261534","https://openalex.org/W4366670578"],"related_works":["https://openalex.org/W2157230268","https://openalex.org/W3043860018","https://openalex.org/W2917877173","https://openalex.org/W1875634434","https://openalex.org/W2746825145","https://openalex.org/W1964101906","https://openalex.org/W1967308801","https://openalex.org/W7111698695","https://openalex.org/W2564298244","https://openalex.org/W3154041498"],"abstract_inverted_index":{"Phytoplasmas":[0],"are":[1,47,82,198,212],"a":[2],"group":[3],"of":[4,38,61,155,228],"plant":[5],"pathogens":[6],"that":[7,66,142,173,193,206],"reduce":[8],"yield":[9],"in":[10,76,188,220],"various":[11,25],"plants":[12,93],"including":[13,157,250],"many":[14],"crops,":[15],"shrubs,":[16],"and":[17,71,78,98,104,116,124,133,167,177,205,232],"tree":[18,139],"species.":[19],"They":[20],"have":[21],"been":[22],"classified":[23],"into":[24],"16Sr":[26],"groups":[27],"or":[28],"\u2018":[29],"Candidatus":[30],"Phytoplasma":[31,203,216],"species\u2019":[32],"based":[33,85,150],"primarily":[34],"on":[35,86,151],"the":[36,59,62,112,186,194,201,225,238,255],"sequences":[37,46],"their":[39,52],"16S":[40],"rRNA":[41,114],"genes.":[42,89],"However,":[43],"other":[44,161],"non-ribosomal":[45],"often":[48],"used":[49],"to":[50,57,183,253],"fine-tune":[51],"classifications.":[53],"This":[54,223],"research":[55],"aimed":[56],"clarify":[58],"categorization":[60],"sugarcane":[63,68,72,96,101,196],"phytoplasma":[64],"s":[65],"cause":[67],"white":[69],"leaf":[70],"grassy":[73],"shoot":[74],"symptoms":[75,97,197,219],"Thailand":[77],"determine":[79],"whether":[80],"they":[81],"different":[83,218,221],"strains,":[84],"non-16S":[87],"ribosomal":[88],"Forty":[90],"samples":[91,121],"from":[92,99,122,160],"exhibiting":[94],"both":[95,145],"symptomless":[100],"were":[102,107,127],"collected":[103,128],"PCR":[105],"amplifications":[106],"done":[108],"with":[109,158,185,237],"primers":[110],"for":[111,129,214,242],"50S":[113],"Ser":[115],"SecA":[117],"genes":[118],"moreover":[119],"soil":[120,130,164,174,229],"non-symptom":[123],"symptom":[125,146],"fields":[126],"chemical":[131,165,175,230],"properties":[132,166,231],"rhizospheric":[134,168,178,233],"microorganism":[135,169,234],"analysis.":[136],"The":[137],"phylogenetic":[138],"results":[140,171],"revealed":[141],"isolates":[143,159],"displaying":[144],"types":[147],"grouped":[148],"together":[149],"all":[152],"three":[153],"sets":[154],"primers,":[156],"countries.":[162],"Additionally,":[163],"analysis":[170],"showed":[172],"factors":[176,246],"microorganisms":[179],"did":[180],"not":[181,235],"appear":[182],"correlate":[184],"differences":[187],"symptoms.":[189,240,256],"It":[190],"is":[191,224],"concluded":[192],"two":[195],"caused":[199],"by":[200],"same":[202],"strain":[204],"other,":[207],"as":[208],"yet":[209],"unidentified":[210,245],"factors,":[211],"responsible":[213],"this":[215],"giving":[217],"situations.":[222],"first":[226],"evidence":[227],"correlating":[236],"diverse":[239],"As":[241],"further":[243],"study,":[244],"will":[247],"be":[248],"studied":[249],"quarantine":[251],"methods":[252],"control":[254]},"counts_by_year":[],"updated_date":"2026-10-07T09:51:55.459714","created_date":"2024-06-29T00:00:00"}