{"id":"https://openalex.org/W4398866085","doi":"https://doi.org/10.7910/dvn/vbcuv3","title":"Replication Data for: Differences in epidemiology of enteropathogens in children pre- and post-rotavirus vaccine introduction in Kilifi, coastal Kenya","display_name":"Replication Data for: Differences in epidemiology of enteropathogens in children pre- and post-rotavirus vaccine introduction in Kilifi, coastal Kenya","publication_year":2021,"publication_date":"2021-04-12","ids":{"openalex":"https://openalex.org/W4398866085","doi":"https://doi.org/10.7910/dvn/vbcuv3"},"language":"en","primary_location":{"id":"doi:10.7910/dvn/vbcuv3","doi":"https://doi.org/10.7910/dvn/vbcuv3","is_oa":true,"landing_page_url":"https://doi.org/10.7910/dvn/vbcuv3","pdf_url":null,"source":{"id":"https://openalex.org/S4377196806","display_name":"Harvard Dataverse","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I136199984","host_organization_name":"Harvard University","host_organization_lineage":["https://openalex.org/I136199984"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},"volume":null,"type":"dataset","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.7910/dvn/vbcuv3","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5020679457","display_name":"Charles N. Agoti","orcid":"https://orcid.org/0000-0002-2160-567X","observed_orcids":["https://orcid.org/0000-0002-2160-567X"]},"institutions":[{"id":"https://openalex.org/I279922783","display_name":"Pwani University","ror":"https://ror.org/02952pd71","country_code":"KE","type":"education","lineage":["https://openalex.org/I279922783"]},{"id":"https://openalex.org/I2841861","display_name":"Kenya Medical Research Institute","ror":"https://ror.org/04r1cxt79","country_code":"KE","type":"facility","lineage":["https://openalex.org/I2841861"]},{"id":"https://openalex.org/I4405267625","display_name":"KEMRI-Wellcome Trust Research Programme","ror":"https://ror.org/03my81p15","country_code":"KE","type":"facility","lineage":["https://openalex.org/I2841861","https://openalex.org/I40120149","https://openalex.org/I4405267625","https://openalex.org/I87048295"]}],"countries":["KE"],"is_corresponding":false,"raw_author_name":"Agoti, Charles N.","raw_affiliation_strings":["KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya; School of Health and Human Sciences, Pwani University, Kilifi, Kenya"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya; School of Health and Human Sciences, Pwani University, Kilifi, Kenya","institution_ids":["https://openalex.org/I279922783","https://openalex.org/I2841861","https://openalex.org/I4405267625"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022752899","display_name":"Martin D. Curran","orcid":"https://orcid.org/0000-0002-1589-5850","observed_orcids":["https://orcid.org/0000-0002-1589-5850"]},"institutions":[{"id":"https://openalex.org/I348769827","display_name":"Public Health England","ror":"https://ror.org/00vbvha87","country_code":"GB","type":"government","lineage":["https://openalex.org/I1311074006","https://openalex.org/I348769827"]},{"id":"https://openalex.org/I4210156194","display_name":"Addenbrooke's Hospital","ror":"https://ror.org/055vbxf86","country_code":"GB","type":"healthcare","lineage":["https://openalex.org/I2802466933","https://openalex.org/I4210156194"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Curran, Martin","raw_affiliation_strings":["Public Health England, Cambridge, United Kingdom; 4. Clinical Microbiology and Public Health Laboratory, Addenbrooke\u2019s Hospital, Cambridge, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Public Health England, Cambridge, United Kingdom; 4. Clinical Microbiology and Public Health Laboratory, Addenbrooke\u2019s Hospital, Cambridge, United Kingdom","institution_ids":["https://openalex.org/I348769827","https://openalex.org/I4210156194"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027299060","display_name":"Nickson Murunga","orcid":"https://orcid.org/0000-0001-5304-2210","observed_orcids":["https://orcid.org/0000-0001-5304-2210"]},"institutions":[{"id":"https://openalex.org/I2841861","display_name":"Kenya Medical Research Institute","ror":"https://ror.org/04r1cxt79","country_code":"KE","type":"facility","lineage":["https://openalex.org/I2841861"]},{"id":"https://openalex.org/I4405267625","display_name":"KEMRI-Wellcome Trust Research Programme","ror":"https://ror.org/03my81p15","country_code":"KE","type":"facility","lineage":["https://openalex.org/I2841861","https://openalex.org/I40120149","https://openalex.org/I4405267625","https://openalex.org/I87048295"]}],"countries":["KE"],"is_corresponding":false,"raw_author_name":"Murunga, Nickson","raw_affiliation_strings":["KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya","institution_ids":["https://openalex.org/I2841861","https://openalex.org/I4405267625"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071335661","display_name":"Moses M. Ngari","orcid":"https://orcid.org/0000-0001-7149-5491","observed_orcids":["https://orcid.org/0000-0001-7149-5491"]},"institutions":[{"id":"https://openalex.org/I2841861","display_name":"Kenya Medical Research Institute","ror":"https://ror.org/04r1cxt79","country_code":"KE","type":"facility","lineage":["https://openalex.org/I2841861"]},{"id":"https://openalex.org/I4405267625","display_name":"KEMRI-Wellcome Trust Research Programme","ror":"https://ror.org/03my81p15","country_code":"KE","type":"facility","lineage":["https://openalex.org/I2841861","https://openalex.org/I40120149","https://openalex.org/I4405267625","https://openalex.org/I87048295"]}],"countries":["KE"],"is_corresponding":false,"raw_author_name":"Ngari, Moses","raw_affiliation_strings":["KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya","institution_ids":["https://openalex.org/I2841861","https://openalex.org/I4405267625"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048948844","display_name":"Esther M. Muthumbi","orcid":"https://orcid.org/0000-0002-8990-7041","observed_orcids":["https://orcid.org/0000-0002-8990-7041"]},"institutions":[{"id":"https://openalex.org/I2841861","display_name":"Kenya Medical Research Institute","ror":"https://ror.org/04r1cxt79","country_code":"KE","type":"facility","lineage":["https://openalex.org/I2841861"]},{"id":"https://openalex.org/I4405267625","display_name":"KEMRI-Wellcome Trust Research Programme","ror":"https://ror.org/03my81p15","country_code":"KE","type":"facility","lineage":["https://openalex.org/I2841861","https://openalex.org/I40120149","https://openalex.org/I4405267625","https://openalex.org/I87048295"]}],"countries":["KE"],"is_corresponding":false,"raw_author_name":"Muthumbi, Esther","raw_affiliation_strings":["KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya","institution_ids":["https://openalex.org/I2841861","https://openalex.org/I4405267625"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044952507","display_name":"Arnold W. Lambisia","orcid":"https://orcid.org/0000-0001-5312-0960","observed_orcids":["https://orcid.org/0000-0001-5312-0960"]},"institutions":[{"id":"https://openalex.org/I2841861","display_name":"Kenya Medical Research Institute","ror":"https://ror.org/04r1cxt79","country_code":"KE","type":"facility","lineage":["https://openalex.org/I2841861"]},{"id":"https://openalex.org/I4405267625","display_name":"KEMRI-Wellcome Trust Research Programme","ror":"https://ror.org/03my81p15","country_code":"KE","type":"facility","lineage":["https://openalex.org/I2841861","https://openalex.org/I40120149","https://openalex.org/I4405267625","https://openalex.org/I87048295"]}],"countries":["KE"],"is_corresponding":false,"raw_author_name":"Lambisia, Arnold W.","raw_affiliation_strings":["KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya","institution_ids":["https://openalex.org/I2841861","https://openalex.org/I4405267625"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071190932","display_name":"Simon D. W. Frost","orcid":"https://orcid.org/0000-0002-5207-9879","observed_orcids":["https://orcid.org/0000-0002-5207-9879"]},"institutions":[{"id":"https://openalex.org/I1290206253","display_name":"Microsoft (United States)","ror":"https://ror.org/00d0nc645","country_code":"US","type":"company","lineage":["https://openalex.org/I1290206253"]},{"id":"https://openalex.org/I4210089966","display_name":"London School of Hygiene & Tropical Medicine","ror":"https://ror.org/00a0jsq62","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I4210089966"]}],"countries":["GB","US"],"is_corresponding":false,"raw_author_name":"Frost, Simon D.W.","raw_affiliation_strings":["Microsoft Research, Building 99, 14820 NE 36th St. Redmond, WA 98052, USA; Department of Infectious Disease Epidemiology, Faculty of Epidemiology and Public Health, London School of Hygiene and Tropical Medicine, Keppel St, Bloomsbury,London WC1E 7HT, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Microsoft Research, Building 99, 14820 NE 36th St. Redmond, WA 98052, USA; Department of Infectious Disease Epidemiology, Faculty of Epidemiology and Public Health, London School of Hygiene and Tropical Medicine, Keppel St, Bloomsbury,London WC1E 7HT, United Kingdom","institution_ids":["https://openalex.org/I1290206253","https://openalex.org/I4210089966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024370991","display_name":"Philip Bejon","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I2841861","display_name":"Kenya Medical Research Institute","ror":"https://ror.org/04r1cxt79","country_code":"KE","type":"facility","lineage":["https://openalex.org/I2841861"]},{"id":"https://openalex.org/I4405267625","display_name":"KEMRI-Wellcome Trust Research Programme","ror":"https://ror.org/03my81p15","country_code":"KE","type":"facility","lineage":["https://openalex.org/I2841861","https://openalex.org/I40120149","https://openalex.org/I4405267625","https://openalex.org/I87048295"]}],"countries":["KE"],"is_corresponding":false,"raw_author_name":"Bejon, Philip","raw_affiliation_strings":["KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya","institution_ids":["https://openalex.org/I2841861","https://openalex.org/I4405267625"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063395363","display_name":"Barbara Blacklaws","orcid":"https://orcid.org/0000-0001-5454-6496","observed_orcids":["https://orcid.org/0000-0001-5454-6496"]},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Blacklaws, Barbara","raw_affiliation_strings":["School of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom","institution_ids":["https://openalex.org/I241749"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087452041","display_name":"D. James Nokes","orcid":"https://orcid.org/0000-0001-5426-1984","observed_orcids":["https://orcid.org/0000-0001-5426-1984"]},"institutions":[{"id":"https://openalex.org/I2841861","display_name":"Kenya Medical Research Institute","ror":"https://ror.org/04r1cxt79","country_code":"KE","type":"facility","lineage":["https://openalex.org/I2841861"]},{"id":"https://openalex.org/I39555362","display_name":"University of Warwick","ror":"https://ror.org/01a77tt86","country_code":"GB","type":"education","lineage":["https://openalex.org/I39555362"]},{"id":"https://openalex.org/I4405267625","display_name":"KEMRI-Wellcome Trust Research Programme","ror":"https://ror.org/03my81p15","country_code":"KE","type":"facility","lineage":["https://openalex.org/I2841861","https://openalex.org/I40120149","https://openalex.org/I4405267625","https://openalex.org/I87048295"]}],"countries":["GB","KE"],"is_corresponding":false,"raw_author_name":"Nokes, David James","raw_affiliation_strings":["KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya; University of Warwick, Coventry, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya; University of Warwick, Coventry, United Kingdom","institution_ids":["https://openalex.org/I2841861","https://openalex.org/I39555362","https://openalex.org/I4405267625"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040941131","display_name":"Lydia N. Drumright","orcid":"https://orcid.org/0000-0002-3361-8080","observed_orcids":["https://orcid.org/0000-0002-3361-8080"]},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB","US"],"is_corresponding":false,"raw_author_name":"Drumright, Lydia","raw_affiliation_strings":["Department of Medicine, University of Cambridge, Cambridge, United Kingdom; Department of Medicine, University of Washington, Washington, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medicine, University of Cambridge, Cambridge, United Kingdom; Department of Medicine, University of Washington, Washington, United States","institution_ids":["https://openalex.org/I201448701","https://openalex.org/I241749"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":10,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10976","display_name":"Viral gastroenteritis research and epidemiology","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10976","display_name":"Viral gastroenteritis research and epidemiology","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11086","display_name":"Parasitic Infections and Diagnostics","score":0.0,"subfield":{"id":"https://openalex.org/subfields/2405","display_name":"Parasitology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10486","display_name":"Salmonella and Campylobacter epidemiology","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/rotavirus-vaccine","display_name":"rotavirus vaccine","score":0.8299999833106995},{"id":"https://openalex.org/keywords/enteric-pathogens","display_name":"enteric pathogens","score":0.878000020980835},{"id":"https://openalex.org/keywords/childhood-diarrhea","display_name":"childhood diarrhea","score":0.8889999985694885},{"id":"https://openalex.org/keywords/enteric-viruses","display_name":"enteric viruses","score":0.8980000019073486},{"id":"https://openalex.org/keywords/vaccine-impact","display_name":"vaccine impact","score":0.5640000104904175},{"id":"https://openalex.org/keywords/children-under-13","display_name":"children under 13","score":0.699999988079071},{"id":"https://openalex.org/keywords/taqman-array-card","display_name":"TaqMan Array Card","score":0.7829999923706055},{"id":"https://openalex.org/keywords/kilifi-kenya","display_name":"Kilifi, Kenya","score":0.7559999823570251}],"concepts":[{"id":"https://openalex.org/C12590798","wikidata":"https://www.wikidata.org/wiki/Q3933199","display_name":"Replication (statistics)","level":2,"score":0.6625949740409851},{"id":"https://openalex.org/C107130276","wikidata":"https://www.wikidata.org/wiki/Q133805","display_name":"Epidemiology","level":2,"score":0.5991860628128052},{"id":"https://openalex.org/C2777227250","wikidata":"https://www.wikidata.org/wiki/Q4411598","display_name":"Rotavirus vaccine","level":4,"score":0.5648510456085205},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.5526033639907837},{"id":"https://openalex.org/C2781367151","wikidata":"https://www.wikidata.org/wiki/Q164778","display_name":"Rotavirus","level":3,"score":0.4731529653072357},{"id":"https://openalex.org/C99454951","wikidata":"https://www.wikidata.org/wiki/Q932068","display_name":"Environmental health","level":1,"score":0.4622499644756317},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.37200355529785156},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.345978319644928},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.107882559299469},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.04955896735191345}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.7910/dvn/vbcuv3","doi":"https://doi.org/10.7910/dvn/vbcuv3","is_oa":true,"landing_page_url":"https://doi.org/10.7910/dvn/vbcuv3","pdf_url":null,"source":{"id":"https://openalex.org/S4377196806","display_name":"Harvard Dataverse","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I136199984","host_organization_name":"Harvard University","host_organization_lineage":["https://openalex.org/I136199984"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"doi:10.7910/dvn/vbcuv3","doi":"https://doi.org/10.7910/dvn/vbcuv3","is_oa":true,"landing_page_url":"https://doi.org/10.7910/dvn/vbcuv3","pdf_url":null,"source":{"id":"https://openalex.org/S4377196806","display_name":"Harvard Dataverse","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I136199984","host_organization_name":"Harvard University","host_organization_lineage":["https://openalex.org/I136199984"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},"sustainable_development_goals":[{"score":0.9789000153541565,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"},{"score":0.40450000762939453,"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W6939327888","https://openalex.org/W6958316960","https://openalex.org/W4398955050","https://openalex.org/W3049557099","https://openalex.org/W7155039364","https://openalex.org/W2773712221","https://openalex.org/W4409842721","https://openalex.org/W4398708695","https://openalex.org/W4400765320","https://openalex.org/W2920803801"],"abstract_inverted_index":{"This":[0],"is":[1,27],"a":[2],"replication":[3],"dataset":[4,26],"for":[5],"the":[6,45],"manuscript":[7],"titled:":[8],"\"Differences":[9],"in":[10,14,21,55,76],"epidemiology":[11],"of":[12,29,32,51],"enteropathogens":[13,54],"children":[15,39,65],"pre-":[16],"and":[17,82],"post-rotavirus":[18],"vaccine":[19],"introduction":[20,79,84],"Kilifi,":[22],"coastal":[23],"Kenya.":[24],"The":[25,71],"part":[28],"long-term":[30],"surveillance":[31],"enteric":[33],"viruses":[34],"associated":[35],"with":[36],"diarrhea":[37],"among":[38],"under":[40],"13":[41,69],"years":[42],"admitted":[43],"to":[44],"KCH":[46],"study.":[47],"It":[48],"contains":[49],"result":[50],"28":[52],"different":[53],"stools":[56],"screened":[57],"by":[58],"Custom":[59],"TaqMan":[60],"Array":[61],"Card":[62],"(TAC)":[63],"from":[64],"aged":[66],"less":[67],"than":[68],"years.":[70],"samples":[72],"tested":[73],"were":[74],"collected":[75],"rotavirus":[77],"pre-vaccine":[78],"period":[80],"(2013)":[81],"post-vaccine":[83],"(2016-2018).":[85]},"counts_by_year":[],"updated_date":"2026-10-30T12:39:25.321706","created_date":"2024-05-25T00:00:00"}