{"id":"https://openalex.org/W4398801136","doi":"https://doi.org/10.7910/dvn/snbqc2","title":"Replication Data for \"Using TrackMate to Analyze Drosophila Larval and Adult Locomotion\"","display_name":"Replication Data for \"Using TrackMate to Analyze Drosophila Larval and Adult Locomotion\"","publication_year":2021,"publication_date":"2021-09-28","ids":{"openalex":"https://openalex.org/W4398801136","doi":"https://doi.org/10.7910/dvn/snbqc2"},"language":"en","primary_location":{"id":"doi:10.7910/dvn/snbqc2","doi":"https://doi.org/10.7910/dvn/snbqc2","is_oa":true,"landing_page_url":"https://doi.org/10.7910/dvn/snbqc2","pdf_url":null,"source":{"id":"https://openalex.org/S4377196806","display_name":"Harvard Dataverse","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I136199984","host_organization_name":"Harvard University","host_organization_lineage":["https://openalex.org/I136199984"],"host_organization_lineage_names":[],"type":"repository"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},"volume":null,"type":"dataset","is_traditional":false,"indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.7910/dvn/snbqc2","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5067601117","display_name":"Alisa A. Omelchenko","orcid":"https://orcid.org/0000-0002-1299-4693","observed_orcids":["https://orcid.org/0000-0002-1299-4693"]},"institutions":[{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"A. Omelchenko, Alisa","raw_affiliation_strings":["Virginia Tech"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Virginia Tech","institution_ids":["https://openalex.org/I859038795"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052647590","display_name":"Ainul Huda","orcid":"https://orcid.org/0000-0003-2073-6659","observed_orcids":["https://orcid.org/0000-0003-2073-6659"]},"institutions":[{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ainul Huda","raw_affiliation_strings":["Virginia Tech"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Virginia Tech","institution_ids":["https://openalex.org/I859038795"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015004855","display_name":"Allison N. Castaneda","orcid":"https://orcid.org/0000-0003-3603-2525","observed_orcids":["https://orcid.org/0000-0003-3603-2525"]},"institutions":[{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"N. Castaneda, Allison","raw_affiliation_strings":["Virginia Tech"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Virginia Tech","institution_ids":["https://openalex.org/I859038795"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034419197","display_name":"Thomas J. Vaden","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J. Vaden, Thomas","raw_affiliation_strings":["Virginia Tech"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Virginia Tech","institution_ids":["https://openalex.org/I859038795"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5006841832","display_name":"Lina Ni","orcid":"https://orcid.org/0000-0003-2155-5155","observed_orcids":["https://orcid.org/0000-0003-2155-5155"]},"institutions":[{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ni, Lina","raw_affiliation_strings":["Virginia Tech"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Virginia Tech","institution_ids":["https://openalex.org/I859038795"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I859038795"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.6338000297546387,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.6338000297546387,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10423","display_name":"Neurobiology and Insect Physiology Research","score":0.3440000116825104,"subfield":{"id":"https://openalex.org/subfields/2804","display_name":"Cellular and Molecular Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11685","display_name":"Zebrafish Biomedical Research Applications","score":0.00559999980032444,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/trackmate","display_name":"TrackMate","score":0.7910000085830688},{"id":"https://openalex.org/keywords/fiji-plugin","display_name":"Fiji plugin","score":0.6150000095367432},{"id":"https://openalex.org/keywords/animal-tracking","display_name":"animal tracking","score":0.7360000014305115},{"id":"https://openalex.org/keywords/larval-behavior","display_name":"larval behavior","score":0.6060000061988831},{"id":"https://openalex.org/keywords/adult-behavior","display_name":"adult behavior","score":0.8050000071525574},{"id":"https://openalex.org/keywords/trajectory-analysis","display_name":"trajectory analysis","score":0.5929999947547913},{"id":"https://openalex.org/keywords/movement-distance","display_name":"movement distance","score":0.5649999976158142},{"id":"https://openalex.org/keywords/video-analysis","display_name":"video analysis","score":0.4350000023841858}],"concepts":[{"id":"https://openalex.org/C12590798","wikidata":"https://www.wikidata.org/wiki/Q3933199","display_name":"Replication (statistics)","level":2,"score":0.8840349912643433},{"id":"https://openalex.org/C2776041557","wikidata":"https://www.wikidata.org/wiki/Q3715451","display_name":"Drosophila (subgenus)","level":3,"score":0.7603644132614136},{"id":"https://openalex.org/C173758957","wikidata":"https://www.wikidata.org/wiki/Q129270","display_name":"Larva","level":2,"score":0.6975948214530945},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5787804126739502},{"id":"https://openalex.org/C90856448","wikidata":"https://www.wikidata.org/wiki/Q431","display_name":"Zoology","level":1,"score":0.36427873373031616},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.3227410912513733},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.17846360802650452},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.1575855016708374},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.09526795148849487},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.058117836713790894}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.7910/dvn/snbqc2","doi":"https://doi.org/10.7910/dvn/snbqc2","is_oa":true,"landing_page_url":"https://doi.org/10.7910/dvn/snbqc2","pdf_url":null,"source":{"id":"https://openalex.org/S4377196806","display_name":"Harvard Dataverse","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I136199984","host_organization_name":"Harvard University","host_organization_lineage":["https://openalex.org/I136199984"],"host_organization_lineage_names":[],"type":"repository"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"doi:10.7910/dvn/snbqc2","doi":"https://doi.org/10.7910/dvn/snbqc2","is_oa":true,"landing_page_url":"https://doi.org/10.7910/dvn/snbqc2","pdf_url":null,"source":{"id":"https://openalex.org/S4377196806","display_name":"Harvard Dataverse","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I136199984","host_organization_name":"Harvard University","host_organization_lineage":["https://openalex.org/I136199984"],"host_organization_lineage_names":[],"type":"repository"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W3203968870","https://openalex.org/W4313200811","https://openalex.org/W4394387413","https://openalex.org/W2620176256","https://openalex.org/W1997883797","https://openalex.org/W6941312564","https://openalex.org/W6903565363","https://openalex.org/W2489134213","https://openalex.org/W6926761141","https://openalex.org/W6958070755"],"abstract_inverted_index":{"Drosophila":[0,58],"adult":[1],"and":[2,17,19,60,73,89,115],"larvae":[3],"exhibit":[4],"sophisticated":[5],"behaviors":[6,25],"that":[7],"are":[8],"widely":[9],"used":[10],"in":[11,119],"development,":[12],"synaptic":[13],"transmission,":[14],"sensory":[15],"physiology,":[16],"learning":[18],"memory":[20],"research.":[21],"Many":[22],"of":[23,31,40,57,92,98],"these":[24],"depend":[26],"on":[27,95],"locomotion,":[28],"the":[29,37,55,87],"ability":[30],"an":[32,48,93,99],"animal":[33,94],"to":[34,53,67],"move.":[35],"However,":[36],"statistical":[38],"analysis":[39,125],"locomotion":[41,56],"is":[42],"not":[43,128],"trivial.":[44],"Here":[45],"we":[46],"use":[47],"open-source":[49],"Fiji":[50,72],"plugin":[51],"TrackMate":[52,85],"track":[54],"adults":[59],"larvae.":[61],"We":[62,77],"build":[63],"optimal":[64],"experimental":[65],"setups":[66],"rapidly":[68],"process":[69],"recordings":[70],"by":[71,75],"analyze":[74],"TrackMate.":[76],"also":[78],"provide":[79],"tips":[80],"for":[81,108],"analyzing":[82],"non-optimal":[83],"recordings.":[84],"extracts":[86],"X":[88],"Y":[90],"positions":[91],"each":[96],"frame":[97],"image":[100],"sequence":[101],"or":[102],"a":[103],"video.":[104],"This":[105],"information":[106],"allows":[107],"generating":[109],"moving":[110,113],"trajectories,":[111],"calculating":[112],"distances,":[114],"determining":[116],"preference":[117],"indices":[118],"two-choice":[120],"assays.":[121],"Notably,":[122],"this":[123],"free-cost":[124],"method":[126],"does":[127],"require":[129],"programming":[130],"skills.":[131]},"counts_by_year":[],"updated_date":"2026-10-30T12:39:25.321706","created_date":"2024-05-25T00:00:00"}