{"id":"https://openalex.org/W4398795299","doi":"https://doi.org/10.48550/arxiv.2405.13376","title":"Markerless retro-identification complements re-identification of individual insect subjects in archived image data of biological experiments","display_name":"Markerless retro-identification complements re-identification of individual insect subjects in archived image data of biological experiments","publication_year":2024,"publication_date":"2024-05-22","ids":{"openalex":"https://openalex.org/W4398795299","doi":"https://doi.org/10.48550/arxiv.2405.13376"},"language":"en","primary_location":{"id":"pmh:oai:arXiv.org:2405.13376","doi":null,"is_oa":true,"landing_page_url":"http://arxiv.org/abs/2405.13376","pdf_url":"https://arxiv.org/pdf/2405.13376","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"volume":null,"type":"preprint","is_traditional":true,"indexed_in":["arxiv","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2405.13376","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5049086185","display_name":"Asaduz Zaman","orcid":"https://orcid.org/0000-0002-5094-4574","observed_orcids":["https://orcid.org/0000-0002-5094-4574"]},"institutions":[{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Zaman, Asaduz","raw_affiliation_strings":["Dept. of Data Science and Artificial Intelligence Faculty of Information Technology , Monash University , Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Data Science and Artificial Intelligence Faculty of Information Technology , Monash University , Australia","institution_ids":["https://openalex.org/I56590836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078269788","display_name":"Vanessa Kellermann","orcid":"https://orcid.org/0000-0002-9859-9642","observed_orcids":["https://orcid.org/0000-0002-9859-9642"]},"institutions":[{"id":"https://openalex.org/I196829312","display_name":"La Trobe University","ror":"https://ror.org/01rxfrp27","country_code":"AU","type":"education","lineage":["https://openalex.org/I196829312"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Kellermann, Vanessa","raw_affiliation_strings":["Dept. of Environment and Genetics School of Agriculture, Biomedicine, and Environment , La Trobe University , Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Environment and Genetics School of Agriculture, Biomedicine, and Environment , La Trobe University , Australia","institution_ids":["https://openalex.org/I196829312"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5051512822","display_name":"Alan Dorin","orcid":"https://orcid.org/0000-0002-5456-4835","observed_orcids":["https://orcid.org/0000-0002-5456-4835"]},"institutions":[{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Dorin, Alan","raw_affiliation_strings":["Dept. of Data Science and Artificial Intelligence Faculty of Information Technology , Monash University , Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Data Science and Artificial Intelligence Faculty of Information Technology , Monash University , Australia","institution_ids":["https://openalex.org/I56590836"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10331","display_name":"Video Surveillance and Tracking Methods","score":0.5898000001907349,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10331","display_name":"Video Surveillance and Tracking Methods","score":0.5898000001907349,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10036","display_name":"Advanced Neural Network Applications","score":0.08950000256299973,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.08370000123977661,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/re-identification","display_name":"re-identification","score":0.7850000262260437},{"id":"https://openalex.org/keywords/insect-tracking","display_name":"insect tracking","score":0.5299999713897705},{"id":"https://openalex.org/keywords/image-classification","display_name":"image classification","score":0.5619999766349792},{"id":"https://openalex.org/keywords/model-training-efficiency","display_name":"model training efficiency","score":0.5}],"concepts":[{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.8200315237045288},{"id":"https://openalex.org/C2777612826","wikidata":"https://www.wikidata.org/wiki/Q1390","display_name":"Insect","level":2,"score":0.685119092464447},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.5283371210098267},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.48799484968185425},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.42604148387908936},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.4182698726654053},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3809181749820709},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.35532015562057495},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.34073710441589355},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.14316391944885254}],"mesh":[],"locations_count":2,"locations":[{"id":"pmh:oai:arXiv.org:2405.13376","doi":null,"is_oa":true,"landing_page_url":"http://arxiv.org/abs/2405.13376","pdf_url":"https://arxiv.org/pdf/2405.13376","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"doi:10.48550/arxiv.2405.13376","doi":"https://doi.org/10.48550/arxiv.2405.13376","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2405.13376","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Preprint"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2405.13376","doi":null,"is_oa":true,"landing_page_url":"http://arxiv.org/abs/2405.13376","pdf_url":"https://arxiv.org/pdf/2405.13376","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4398795299.pdf","grobid_xml":"https://content.openalex.org/works/W4398795299.grobid-xml"},"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2921268142","https://openalex.org/W4417257519","https://openalex.org/W4388685564","https://openalex.org/W7140654282","https://openalex.org/W4223508319","https://openalex.org/W7160318080","https://openalex.org/W7223052037","https://openalex.org/W4308745377","https://openalex.org/W7213983253","https://openalex.org/W4224943773"],"abstract_inverted_index":{"This":[0,132,207],"study":[1,155],"introduces":[2],"markerless":[3],"retro-identification":[4,124],"of":[5,17,34,57,160,185],"animals,":[6],"a":[7,35,55],"novel":[8],"concept":[9],"and":[10,77,137,188],"practical":[11],"technique":[12],"to":[13,75,86,95,110,119,128,191],"identify":[14],"past":[15],"occurrences":[16],"organisms":[18],"in":[19,29,44,71,114,211,215],"archived":[20],"data,":[21,180],"that":[22],"complements":[23],"traditional":[24],"forward-looking":[25],"chronological":[26,194],"re-identification":[27],"methods":[28],"longitudinal":[30,61,216],"behavioural":[31],"research.":[32],"Identification":[33],"key":[36],"individual":[37],"among":[38],"multiple":[39],"subjects":[40,142],"may":[41],"occur":[42],"late":[43],"an":[45,101,151],"experiment":[46,102],"if":[47,83],"it":[48],"reveals":[49],"itself":[50],"through":[51],"interesting":[52,107],"behaviour":[53],"after":[54,144],"period":[56],"undifferentiated":[58],"performance.":[59],"Often,":[60],"studies":[62],"also":[63],"encounter":[64],"subject":[65],"attrition":[66],"during":[67],"experiments.":[68],"Effort":[69],"invested":[70],"training":[72,115,127,175],"software":[73,118],"models":[74],"recognise":[76,120],"track":[78],"such":[79],"individuals":[80,97],"is":[81],"wasted":[82],"they":[84,145],"fail":[85],"complete":[87,100],"the":[88,183,192],"experiment.":[89],"Ideally,":[90],"we":[91],"would":[92],"be":[93],"able":[94],"select":[96],"who":[98],"both":[99],"and/or":[103],"differentiate":[104,146],"themselves":[105,147],"via":[106],"behaviour,":[108],"prior":[109],"investing":[111],"computational":[112,138],"resources":[113,139],"image":[116],"classification":[117],"them.":[121],"We":[122,170],"propose":[123],"for":[125],"model":[126,172],"achieve":[129],"this":[130],"aim.":[131],"reduces":[133],"manual":[134],"annotation":[135],"effort":[136],"by":[140,174],"identifying":[141],"only":[143],"late,":[148],"or":[149],"at":[150],"experiment's":[152],"conclusion.":[153],"Our":[154],"dataset":[156],"comprises":[157],"observations":[158],"made":[159],"morphologically":[161],"similar":[162],"reed":[163],"bees":[164],"(\\textit{Exoneura":[165],"robusta})":[166],"over":[167],"five":[168,179],"days.":[169],"evaluated":[171],"performance":[173],"on":[176,182],"final":[177],"day":[178,197],"testing":[181],"sequence":[184],"preceding":[186],"days,":[187],"comparing":[189],"results":[190],"usual":[193],"evaluation":[195],"from":[196],"one.":[198],"Results":[199],"indicate":[200],"no":[201],"significant":[202],"accuracy":[203],"difference":[204],"between":[205],"models.":[206],"underscores":[208],"retro-identification's":[209],"value":[210],"improving":[212],"resource":[213],"efficiency":[214],"animal":[217],"studies.":[218]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":1}],"updated_date":"2026-11-07T11:25:07.637180","created_date":"2024-05-25T00:00:00"}