{"id":"https://openalex.org/W4396944597","doi":"https://doi.org/10.1093/gbe/evae109","title":"Genome Assembly of the Dyeing Poison Frog Provides Insights into the Dynamics of Transposable Element and Genome-Size Evolution","display_name":"Genome Assembly of the Dyeing Poison Frog Provides Insights into the Dynamics of Transposable Element and Genome-Size Evolution","publication_year":2024,"publication_date":"2024-05-16","ids":{"openalex":"https://openalex.org/W4396944597","doi":"https://doi.org/10.1093/gbe/evae109","pmid":"https://pubmed.ncbi.nlm.nih.gov/38753031","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/11152451"},"language":"en","primary_location":{"id":"doi:10.1093/gbe/evae109","doi":"https://doi.org/10.1093/gbe/evae109","is_oa":true,"landing_page_url":"https://doi.org/10.1093/gbe/evae109","pdf_url":"https://academic.oup.com/gbe/advance-article-pdf/doi/10.1093/gbe/evae109/57704360/evae109.pdf","source":{"id":"https://openalex.org/S10195028","display_name":"Genome Biology and Evolution","issn_l":"1759-6653","issn":["1759-6653"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-d","doyens","jufo-2","ki-jl-2","medline","norway-2","oarl","poland-100","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome Biology and Evolution","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/gbe/advance-article-pdf/doi/10.1093/gbe/evae109/57704360/evae109.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055137516","display_name":"Carolin Dittrich","orcid":"https://orcid.org/0000-0002-4447-4481","observed_orcids":["https://orcid.org/0000-0002-4447-4481"]},"institutions":[{"id":"https://openalex.org/I150540706","display_name":"University of Veterinary Medicine Vienna","ror":"https://ror.org/01w6qp003","country_code":"AT","type":"education","lineage":["https://openalex.org/I150540706"]},{"id":"https://openalex.org/I94722563","display_name":"University of Jyv\u00e4skyl\u00e4","ror":"https://ror.org/05n3dz165","country_code":"FI","type":"education","lineage":["https://openalex.org/I94722563"]}],"countries":["AT","FI"],"is_corresponding":true,"raw_author_name":"Carolin Dittrich","raw_affiliation_strings":["Department of Biology and Environmental Sciences, University of Jyv\u00e4skyl\u00e4 , Jyv\u00e4skyl\u00e4 , Finland","Department of Interdisciplinary Life Sciences, Konrad Lorenz Institute of Ethology, University of Veterinary Medicine, Vienna, Austria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology and Environmental Sciences, University of Jyv\u00e4skyl\u00e4 , Jyv\u00e4skyl\u00e4 , Finland","institution_ids":["https://openalex.org/I94722563"]},{"raw_affiliation_string":"Department of Interdisciplinary Life Sciences, Konrad Lorenz Institute of Ethology, University of Veterinary Medicine, Vienna, Austria","institution_ids":["https://openalex.org/I150540706"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086887631","display_name":"Franz Hoelzl","orcid":"https://orcid.org/0000-0001-9717-4338","observed_orcids":["https://orcid.org/0000-0001-9717-4338"]},"institutions":[{"id":"https://openalex.org/I150540706","display_name":"University of Veterinary Medicine Vienna","ror":"https://ror.org/01w6qp003","country_code":"AT","type":"education","lineage":["https://openalex.org/I150540706"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Franz Hoelzl","raw_affiliation_strings":["Department of Interdisciplinary Life Sciences, Konrad Lorenz Institute of Ethology, University of Veterinary Medicine , Vienna , Austria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Interdisciplinary Life Sciences, Konrad Lorenz Institute of Ethology, University of Veterinary Medicine , Vienna , Austria","institution_ids":["https://openalex.org/I150540706"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083245547","display_name":"Steve Smith","orcid":"https://orcid.org/0000-0002-1318-0018","observed_orcids":["https://orcid.org/0000-0002-1318-0018"]},"institutions":[{"id":"https://openalex.org/I150540706","display_name":"University of Veterinary Medicine Vienna","ror":"https://ror.org/01w6qp003","country_code":"AT","type":"education","lineage":["https://openalex.org/I150540706"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Steve Smith","raw_affiliation_strings":["Department of Interdisciplinary Life Sciences, Konrad Lorenz Institute of Ethology, University of Veterinary Medicine , Vienna , Austria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Interdisciplinary Life Sciences, Konrad Lorenz Institute of Ethology, University of Veterinary Medicine , Vienna , Austria","institution_ids":["https://openalex.org/I150540706"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009194224","display_name":"Chloe A. Fouilloux","orcid":"https://orcid.org/0000-0003-1265-5824","observed_orcids":["https://orcid.org/0000-0003-1265-5824"]},"institutions":[{"id":"https://openalex.org/I94722563","display_name":"University of Jyv\u00e4skyl\u00e4","ror":"https://ror.org/05n3dz165","country_code":"FI","type":"education","lineage":["https://openalex.org/I94722563"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Chloe A Fouilloux","raw_affiliation_strings":["Department of Biology and Environmental Sciences, University of Jyv\u00e4skyl\u00e4 , Jyv\u00e4skyl\u00e4 , Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology and Environmental Sciences, University of Jyv\u00e4skyl\u00e4 , Jyv\u00e4skyl\u00e4 , Finland","institution_ids":["https://openalex.org/I94722563"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003162697","display_name":"Darren James Parker","orcid":"https://orcid.org/0000-0003-4027-7779","observed_orcids":["https://orcid.org/0000-0003-4027-7779"]},"institutions":[{"id":"https://openalex.org/I161548249","display_name":"Bangor University","ror":"https://ror.org/006jb1a24","country_code":"GB","type":"education","lineage":["https://openalex.org/I161548249"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Darren J Parker","raw_affiliation_strings":["School of Environmental and Natural Sciences, Molecular Ecology & Evolution Group, Bangor University , Bangor , UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Environmental and Natural Sciences, Molecular Ecology & Evolution Group, Bangor University , Bangor , UK","institution_ids":["https://openalex.org/I161548249"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052251004","display_name":"Lauren A. O\u2019Connell","orcid":"https://orcid.org/0000-0002-2706-4077","observed_orcids":["https://orcid.org/0000-0002-2706-4077"]},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lauren A O\u2019Connell","raw_affiliation_strings":["Department of Biology, Stanford University , Stanford , USA"],"raw_orcid":"https://orcid.org/0000-0002-2706-4077","affiliations":[{"raw_affiliation_string":"Department of Biology, Stanford University , Stanford , USA","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5093213812","display_name":"Lucy S. Knowles","orcid":"https://orcid.org/0009-0008-9959-1635","observed_orcids":["https://orcid.org/0009-0008-9959-1635"]},"institutions":[{"id":"https://openalex.org/I4388482733","display_name":"NERC Environmental Omics Facility","ror":"https://ror.org/036g3b009","country_code":"GB","type":"facility","lineage":["https://openalex.org/I141816643","https://openalex.org/I146655781","https://openalex.org/I4210087105","https://openalex.org/I4388482733","https://openalex.org/I91136226"]},{"id":"https://openalex.org/I91136226","display_name":"University of Sheffield","ror":"https://ror.org/05krs5044","country_code":"GB","type":"education","lineage":["https://openalex.org/I91136226"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Lucy S Knowles","raw_affiliation_strings":["NERC Environmental Omics Facility, University of Sheffield , Sheffield , UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"NERC Environmental Omics Facility, University of Sheffield , Sheffield , UK","institution_ids":["https://openalex.org/I4388482733","https://openalex.org/I91136226"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103407508","display_name":"MARGARET A. HUGHES","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I146655781","display_name":"University of Liverpool","ror":"https://ror.org/04xs57h96","country_code":"GB","type":"education","lineage":["https://openalex.org/I146655781"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Margaret Hughes","raw_affiliation_strings":["Centre for Genomic Research, University of Liverpool , Liverpool , UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Genomic Research, University of Liverpool , Liverpool , UK","institution_ids":["https://openalex.org/I146655781"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5093213813","display_name":"Ade Fewings","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I161548249","display_name":"Bangor University","ror":"https://ror.org/006jb1a24","country_code":"GB","type":"education","lineage":["https://openalex.org/I161548249"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Ade Fewings","raw_affiliation_strings":["Supercomputing Wales, Digital Services, Bangor University , Bangor , UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Supercomputing Wales, Digital Services, Bangor University , Bangor , UK","institution_ids":["https://openalex.org/I161548249"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Rhys Morgan","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I161548249","display_name":"Bangor University","ror":"https://ror.org/006jb1a24","country_code":"GB","type":"education","lineage":["https://openalex.org/I161548249"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Rhys Morgan","raw_affiliation_strings":["School of Environmental and Natural Sciences, Molecular Ecology & Evolution Group, Bangor University , Bangor , UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Environmental and Natural Sciences, Molecular Ecology & Evolution Group, Bangor University , Bangor , UK","institution_ids":["https://openalex.org/I161548249"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030100082","display_name":"Bibiana Rojas","orcid":"https://orcid.org/0000-0002-6715-7294","observed_orcids":["https://orcid.org/0000-0002-6715-7294"]},"institutions":[{"id":"https://openalex.org/I150540706","display_name":"University of Veterinary Medicine Vienna","ror":"https://ror.org/01w6qp003","country_code":"AT","type":"education","lineage":["https://openalex.org/I150540706"]},{"id":"https://openalex.org/I94722563","display_name":"University of Jyv\u00e4skyl\u00e4","ror":"https://ror.org/05n3dz165","country_code":"FI","type":"education","lineage":["https://openalex.org/I94722563"]}],"countries":["AT","FI"],"is_corresponding":false,"raw_author_name":"Bibiana Rojas","raw_affiliation_strings":["Department of Biology and Environmental Sciences, University of Jyv\u00e4skyl\u00e4 , Jyv\u00e4skyl\u00e4 , Finland","Department of Interdisciplinary Life Sciences, Konrad Lorenz Institute of Ethology, University of Veterinary Medicine, Vienna, Austria"],"raw_orcid":"https://orcid.org/0000-0002-6715-7294","affiliations":[{"raw_affiliation_string":"Department of Biology and Environmental Sciences, University of Jyv\u00e4skyl\u00e4 , Jyv\u00e4skyl\u00e4 , Finland","institution_ids":["https://openalex.org/I94722563"]},{"raw_affiliation_string":"Department of Interdisciplinary Life Sciences, Konrad Lorenz Institute of Ethology, University of Veterinary Medicine, Vienna, Austria","institution_ids":["https://openalex.org/I150540706"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5067327670","display_name":"Aaron A. Comeault","orcid":"https://orcid.org/0000-0003-3954-2416","observed_orcids":["https://orcid.org/0000-0003-3954-2416"]},"institutions":[{"id":"https://openalex.org/I161548249","display_name":"Bangor University","ror":"https://ror.org/006jb1a24","country_code":"GB","type":"education","lineage":["https://openalex.org/I161548249"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Aaron A Comeault","raw_affiliation_strings":["School of Environmental and Natural Sciences, Molecular Ecology & Evolution Group, Bangor University , Bangor , UK"],"raw_orcid":"https://orcid.org/0000-0003-3954-2416","affiliations":[{"raw_affiliation_string":"School of Environmental and Natural Sciences, Molecular Ecology & Evolution Group, Bangor University , Bangor , UK","institution_ids":["https://openalex.org/I161548249"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5055137516","https://openalex.org/A5067327670"],"corresponding_institution_ids":["https://openalex.org/I150540706","https://openalex.org/I161548249","https://openalex.org/I94722563"],"apc_list":{"value":2992,"currency":"USD","value_usd":2992},"apc_paid":{"value":2992,"currency":"USD","value_usd":2992},"fwci":1.811,"has_fulltext":true,"cited_by_count":9,"citation_normalized_percentile":{"value":0.83813503,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":93,"max":97},"biblio":{"volume":"16","issue":"6","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.0006000000284984708,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13664","display_name":"Genome Rearrangement Algorithms","score":0.00019999999494757503,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dendrobates-tinctorius","display_name":"Dendrobates tinctorius","score":0.9959999918937683},{"id":"https://openalex.org/keywords/dendrobatidae","display_name":"Dendrobatidae","score":0.6129999756813049},{"id":"https://openalex.org/keywords/genome-assembly","display_name":"genome assembly","score":0.9279999732971191},{"id":"https://openalex.org/keywords/genome-size-evolution","display_name":"genome size evolution","score":0.8370000123977661},{"id":"https://openalex.org/keywords/transposable-elements","display_name":"transposable elements","score":0.9980000257492065},{"id":"https://openalex.org/keywords/insertion-time","display_name":"insertion time","score":0.5690000057220459},{"id":"https://openalex.org/keywords/synteny","display_name":"synteny","score":0.7720000147819519},{"id":"https://openalex.org/keywords/chromosomal-rearrangements","display_name":"chromosomal rearrangements","score":0.8700000047683716},{"id":"https://openalex.org/keywords/genotyping","display_name":"genotyping","score":0.6230000257492065},{"id":"https://openalex.org/keywords/amphibians","display_name":"amphibians","score":0.628000020980835}],"concepts":[{"id":"https://openalex.org/C4918238","wikidata":"https://www.wikidata.org/wiki/Q121438","display_name":"Transposable element","level":4,"score":0.92787766456604},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8649367690086365},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.7355464696884155},{"id":"https://openalex.org/C61271108","wikidata":"https://www.wikidata.org/wiki/Q3180866","display_name":"Genome size","level":4,"score":0.5575079321861267},{"id":"https://openalex.org/C174600577","wikidata":"https://www.wikidata.org/wiki/Q5533491","display_name":"Genome evolution","level":4,"score":0.5372808575630188},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.5000262260437012},{"id":"https://openalex.org/C2910146623","wikidata":"https://www.wikidata.org/wiki/Q121438","display_name":"DNA Transposable Elements","level":5,"score":0.44187620282173157},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4037613272666931},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.25415629148483276}],"mesh":[{"descriptor_ui":"D000097702","descriptor_name":"Poison Frogs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001001","descriptor_name":"Anura","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D004251","descriptor_name":"DNA Transposable Elements","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059646","descriptor_name":"Genome Size","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1093/gbe/evae109","doi":"https://doi.org/10.1093/gbe/evae109","is_oa":true,"landing_page_url":"https://doi.org/10.1093/gbe/evae109","pdf_url":"https://academic.oup.com/gbe/advance-article-pdf/doi/10.1093/gbe/evae109/57704360/evae109.pdf","source":{"id":"https://openalex.org/S10195028","display_name":"Genome Biology and Evolution","issn_l":"1759-6653","issn":["1759-6653"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-d","doyens","jufo-2","ki-jl-2","medline","norway-2","oarl","poland-100","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome Biology and Evolution","raw_type":"journal-article"},{"id":"doi:10.1101/2023.11.06.565769","doi":"https://doi.org/10.1101/2023.11.06.565769","is_oa":true,"landing_page_url":"https://doi.org/10.1101/2023.11.06.565769","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2023/11/07/2023.11.06.565769.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},{"id":"pmh:oai:pubmedcentral.nih.gov:11152451","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11152451","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11152451/pdf/evae109.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome Biol Evol","raw_type":"Text"},{"id":"pmid:38753031","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38753031","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome biology and evolution","raw_type":"Journal Article"},{"id":"pmh:oai:eprints.whiterose.ac.uk:213323","doi":null,"is_oa":true,"landing_page_url":"https://eprints.whiterose.ac.uk/213323/1/evae109.pdf","pdf_url":"https://eprints.whiterose.ac.uk/213323/1/evae109.pdf","source":{"id":"https://openalex.org/S4306400854","display_name":"White Rose Research Online (University of Leeds, The University of Sheffield, University of York)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2800616092","host_organization_name":"White Rose University Consortium","host_organization_lineage":["https://openalex.org/I2800616092"],"host_organization_lineage_names":[],"type":"repository"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:jyx.jyu.fi:123456789/96190","doi":null,"is_oa":true,"landing_page_url":"http://urn.fi/URN:NBN:fi:jyu-202406275032","pdf_url":"https://jyx.jyu.fi/bitstreams/6f2b2601-7443-4c7f-9cdc-2f272628dae3/download","source":{"id":"https://openalex.org/S4306400563","display_name":"Jyv\u00e4skyl\u00e4 University Digital Archive (University of Jyv\u00e4skyl\u00e4)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I94722563","host_organization_name":"University of Jyv\u00e4skyl\u00e4","host_organization_lineage":["https://openalex.org/I94722563"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"research article"}],"best_oa_location":{"id":"doi:10.1093/gbe/evae109","doi":"https://doi.org/10.1093/gbe/evae109","is_oa":true,"landing_page_url":"https://doi.org/10.1093/gbe/evae109","pdf_url":"https://academic.oup.com/gbe/advance-article-pdf/doi/10.1093/gbe/evae109/57704360/evae109.pdf","source":{"id":"https://openalex.org/S10195028","display_name":"Genome Biology and Evolution","issn_l":"1759-6653","issn":["1759-6653"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-d","doyens","jufo-2","ki-jl-2","medline","norway-2","oarl","poland-100","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome Biology and Evolution","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G2769086362","display_name":"Physiological Adaptions for a Deadly Diet: Bioaccumulation Mechanisms of Defensive Chemicals in a Poison Frog","funder_award_id":"1822025","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G516246011","display_name":"NERC Environmental Omics Facility","funder_award_id":"NE/Y005430/1","funder_id":"https://openalex.org/F4320334631","funder_display_name":"Natural Environment Research Council"},{"id":"https://openalex.org/G6093085941","display_name":"EDGE:  Developing techniques for linking genotype to phenotype in amphibians","funder_award_id":"1827333","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7318525389","display_name":"NERC Environmental Omics Facility (NEOF)","funder_award_id":"NE/V003860/1","funder_id":"https://openalex.org/F4320334631","funder_display_name":"Natural Environment Research Council"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320334631","display_name":"Natural Environment Research Council","ror":"https://ror.org/02b5d8509"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4396944597.pdf","grobid_xml":"https://content.openalex.org/works/W4396944597.grobid-xml"},"referenced_works_count":113,"referenced_works":["https://openalex.org/W221200352","https://openalex.org/W1597884192","https://openalex.org/W1847313564","https://openalex.org/W1980094530","https://openalex.org/W2020506534","https://openalex.org/W2026122286","https://openalex.org/W2026519705","https://openalex.org/W2028990937","https://openalex.org/W2036897871","https://openalex.org/W2042086471","https://openalex.org/W2042448650","https://openalex.org/W2044251005","https://openalex.org/W2054056464","https://openalex.org/W2055625638","https://openalex.org/W2059864757","https://openalex.org/W2061625957","https://openalex.org/W2062836337","https://openalex.org/W2064536789","https://openalex.org/W2065339408","https://openalex.org/W2065461553","https://openalex.org/W2069712815","https://openalex.org/W2089943170","https://openalex.org/W2092246512","https://openalex.org/W2100752747","https://openalex.org/W2102619694","https://openalex.org/W2106389870","https://openalex.org/W2108026811","https://openalex.org/W2108524369","https://openalex.org/W2119233950","https://openalex.org/W2120429582","https://openalex.org/W2128681179","https://openalex.org/W2128731054","https://openalex.org/W2129034036","https://openalex.org/W2130840825","https://openalex.org/W2131271579","https://openalex.org/W2147634297","https://openalex.org/W2148089749","https://openalex.org/W2149992227","https://openalex.org/W2151947762","https://openalex.org/W2152222332","https://openalex.org/W2155628349","https://openalex.org/W2160378127","https://openalex.org/W2161901637","https://openalex.org/W2167406239","https://openalex.org/W2168902004","https://openalex.org/W2169456326","https://openalex.org/W2341609891","https://openalex.org/W2491404179","https://openalex.org/W2584829257","https://openalex.org/W2731841059","https://openalex.org/W2735092275","https://openalex.org/W2765284830","https://openalex.org/W2780157786","https://openalex.org/W2784936077","https://openalex.org/W2786089085","https://openalex.org/W2789843538","https://openalex.org/W2804523376","https://openalex.org/W2822240849","https://openalex.org/W2883251903","https://openalex.org/W2884125637","https://openalex.org/W2892635007","https://openalex.org/W2893982408","https://openalex.org/W2895257999","https://openalex.org/W2900995858","https://openalex.org/W2901901698","https://openalex.org/W2948076807","https://openalex.org/W2949202298","https://openalex.org/W2950993016","https://openalex.org/W2953479263","https://openalex.org/W2957683791","https://openalex.org/W2963276645","https://openalex.org/W2966081494","https://openalex.org/W2969926818","https://openalex.org/W2971559821","https://openalex.org/W2972025072","https://openalex.org/W2973664104","https://openalex.org/W2981549736","https://openalex.org/W2990618091","https://openalex.org/W2990871165","https://openalex.org/W3004159268","https://openalex.org/W3017049640","https://openalex.org/W3021325701","https://openalex.org/W3027719757","https://openalex.org/W3036325257","https://openalex.org/W3047598142","https://openalex.org/W3048222127","https://openalex.org/W3119908887","https://openalex.org/W3119984181","https://openalex.org/W3131055609","https://openalex.org/W3135161291","https://openalex.org/W3137981565","https://openalex.org/W3150883499","https://openalex.org/W3166508821","https://openalex.org/W3169073551","https://openalex.org/W3171028498","https://openalex.org/W3201109403","https://openalex.org/W3202634790","https://openalex.org/W3205442753","https://openalex.org/W3213656100","https://openalex.org/W3217739320","https://openalex.org/W4206335732","https://openalex.org/W4220668127","https://openalex.org/W4223431190","https://openalex.org/W4225249019","https://openalex.org/W4295078843","https://openalex.org/W4308987467","https://openalex.org/W4353020438","https://openalex.org/W4376631294","https://openalex.org/W4383370111","https://openalex.org/W4390941771","https://openalex.org/W4399591437","https://openalex.org/W6755019673","https://openalex.org/W7075681496"],"related_works":["https://openalex.org/W2893982408","https://openalex.org/W4417448679","https://openalex.org/W2263391408","https://openalex.org/W4383370111","https://openalex.org/W4407688893","https://openalex.org/W1597884192","https://openalex.org/W7204702687","https://openalex.org/W3135161291","https://openalex.org/W4411494837","https://openalex.org/W2156581169"],"abstract_inverted_index":{"Abstract":[0],"Genome":[1],"size":[2,42,105,147,212],"varies":[3],"greatly":[4],"across":[5],"the":[6,24,36,63,111,118,130,143,175,207,223],"tree":[7],"of":[8,40,113,120,132,145,153,179,209,225],"life":[9],"and":[10,38,78,86,106,127,163,172,177,229],"transposable":[11,121,133,180,198,226],"elements":[12,122,134,181,199],"are":[13,161,218],"an":[14,139,203],"important":[15,140,204],"contributor":[16],"to":[17,34,73,124,220,230],"this":[18,71],"variation.":[19,43],"Among":[20],"vertebrates,":[21],"amphibians":[22,49],"display":[23],"greatest":[25],"variation":[26],"in":[27,96,135,142,148,182,206,213,240],"genome":[28,41,46,60,104,211],"size,":[29],"making":[30],"them":[31],"ideal":[32],"models":[33],"explore":[35,110],"causes":[37],"consequences":[39],"However,":[44],"high-quality":[45,59],"assemblies":[47],"for":[48,62,81,236],"have,":[50],"until":[51],"recently,":[52],"been":[53],"rare.":[54],"Here,":[55],"we":[56,116,166],"generate":[57],"a":[58,100],"assembly":[61,72],"dyeing":[64],"poison":[65,183],"frog,":[66],"Dendrobates":[67],"tinctorius.":[68,215],"We":[69],"compare":[70],"publicly":[74],"available":[75],"frog":[76,90,184],"genomes":[77,98,185],"find":[79,128],"evidence":[80],"both":[82],"large-scale":[83],"conserved":[84,93],"synteny":[85],"widespread":[87],"rearrangements":[88],"between":[89,103],"lineages.":[91],"Comparing":[92],"orthologs":[94],"annotated":[95],"these":[97],"revealed":[99],"strong":[101],"correlation":[102],"gene":[107,125,146],"size.":[108],"To":[109],"cause":[112],"gene-size":[114],"variation,":[115],"quantified":[117],"location":[119],"relative":[123],"features":[126],"that":[129,157,174,197],"accumulation":[131],"introns":[136],"has":[137],"played":[138,202],"role":[141,205],"evolution":[144,208,228],"D.":[149,214],"tinctorius,":[150],"while":[151],"estimates":[152],"insertion":[154,159],"times":[155],"suggest":[156],"many":[158],"events":[160],"recent":[162],"species-specific.":[164],"Finally,":[165],"carry":[167],"out":[168],"population-scale":[169],"mobile-element":[170],"sequencing":[171],"show":[173,196],"diversity":[176],"abundance":[178],"can":[186],"complicate":[187],"genotyping":[188,239],"from":[189],"repetitive":[190,244],"element":[191,227],"sequence":[192],"anchors.":[193],"Our":[194],"results":[195],"have":[200],"clearly":[201],"large":[210],"Future":[216],"studies":[217],"needed":[219],"fully":[221],"understand":[222],"dynamics":[224],"optimize":[231],"primer":[232],"or":[233],"bait":[234],"design":[235],"cost-effective":[237],"population-level":[238],"species":[241],"with":[242],"large,":[243],"genomes.":[245]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":2}],"updated_date":"2026-11-12T12:28:57.059296","created_date":"2024-05-16T00:00:00"}