{"id":"https://openalex.org/W4396856941","doi":"https://doi.org/10.1038/s41598-024-60491-y","title":"Multiplex PCR for bacterial, viral and protozoal pathogens in persistent diarrhoea or persistent abdominal pain in C\u00f4te d\u2019Ivoire, Mali and Nepal","display_name":"Multiplex PCR for bacterial, viral and protozoal pathogens in persistent diarrhoea or persistent abdominal pain in C\u00f4te d\u2019Ivoire, Mali and Nepal","publication_year":2024,"publication_date":"2024-05-13","ids":{"openalex":"https://openalex.org/W4396856941","doi":"https://doi.org/10.1038/s41598-024-60491-y","pmid":"https://pubmed.ncbi.nlm.nih.gov/38740833","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/11091045"},"language":"en","primary_location":{"id":"doi:10.1038/s41598-024-60491-y","doi":"https://doi.org/10.1038/s41598-024-60491-y","is_oa":true,"landing_page_url":"http://dx.doi.org/10.1038/s41598-024-60491-y","pdf_url":"https://www.nature.com/articles/s41598-024-60491-y.pdf","source":{"id":"https://openalex.org/S196734849","display_name":"Scientific Reports","issn_l":"2045-2322","issn":["2045-2322"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific Reports","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.nature.com/articles/s41598-024-60491-y.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5083465404","display_name":"Jasmin Kaur Jasuja","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I2802164966","display_name":"University Hospital Heidelberg","ror":"https://ror.org/013czdx64","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2802164966"]},{"id":"https://openalex.org/I91712215","display_name":"Saarland University","ror":"https://ror.org/01jdpyv68","country_code":"DE","type":"education","lineage":["https://openalex.org/I91712215"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Jasmin K. Jasuja","raw_affiliation_strings":["Department for Infectious Diseases, University Hospital Heidelberg, Heidelberg, Germany","Institute of Medical Microbiology and Hygiene, Saarland University, Kirrberger Stra\u00dfe, Building 43, 66421, Homburg/Saar, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department for Infectious Diseases, University Hospital Heidelberg, Heidelberg, Germany","institution_ids":["https://openalex.org/I2802164966"]},{"raw_affiliation_string":"Institute of Medical Microbiology and Hygiene, Saarland University, Kirrberger Stra\u00dfe, Building 43, 66421, Homburg/Saar, Germany","institution_ids":["https://openalex.org/I91712215"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069257191","display_name":"Florian Bub","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I91712215","display_name":"Saarland University","ror":"https://ror.org/01jdpyv68","country_code":"DE","type":"education","lineage":["https://openalex.org/I91712215"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Florian Bub","raw_affiliation_strings":["Institute of Medical Microbiology and Hygiene, Saarland University, Kirrberger Stra\u00dfe, Building 43, 66421, Homburg/Saar, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Microbiology and Hygiene, Saarland University, Kirrberger Stra\u00dfe, Building 43, 66421, Homburg/Saar, Germany","institution_ids":["https://openalex.org/I91712215"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065190590","display_name":"Jonas Veit","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I91712215","display_name":"Saarland University","ror":"https://ror.org/01jdpyv68","country_code":"DE","type":"education","lineage":["https://openalex.org/I91712215"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Jonas Veit","raw_affiliation_strings":["Institute of Medical Microbiology and Hygiene, Saarland University, Kirrberger Stra\u00dfe, Building 43, 66421, Homburg/Saar, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Microbiology and Hygiene, Saarland University, Kirrberger Stra\u00dfe, Building 43, 66421, Homburg/Saar, Germany","institution_ids":["https://openalex.org/I91712215"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019525332","display_name":"Hassan K. M. Fofana","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210088869","display_name":"Institut National de Recherche en Sant\u00e9 Publique","ror":"https://ror.org/005haay02","country_code":"ML","type":"government","lineage":["https://openalex.org/I4210088869"]}],"countries":["ML"],"is_corresponding":false,"raw_author_name":"Hassan K. M. Fofana","raw_affiliation_strings":["Institut National de Recherche en Sant\u00e9 Publique, Bamako, Mali"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut National de Recherche en Sant\u00e9 Publique, Bamako, Mali","institution_ids":["https://openalex.org/I4210088869"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109978635","display_name":"Moussa Sacko","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210088869","display_name":"Institut National de Recherche en Sant\u00e9 Publique","ror":"https://ror.org/005haay02","country_code":"ML","type":"government","lineage":["https://openalex.org/I4210088869"]}],"countries":["ML"],"is_corresponding":false,"raw_author_name":"Moussa Sacko","raw_affiliation_strings":["Institut National de Recherche en Sant\u00e9 Publique, Bamako, Mali"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut National de Recherche en Sant\u00e9 Publique, Bamako, Mali","institution_ids":["https://openalex.org/I4210088869"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109128409","display_name":"R\u00e9nion Saye","orcid":"https://orcid.org/0000-0002-4659-4655","observed_orcids":["https://orcid.org/0000-0002-4659-4655"]},"institutions":[{"id":"https://openalex.org/I4210088869","display_name":"Institut National de Recherche en Sant\u00e9 Publique","ror":"https://ror.org/005haay02","country_code":"ML","type":"government","lineage":["https://openalex.org/I4210088869"]}],"countries":["ML"],"is_corresponding":false,"raw_author_name":"R\u00e9nion Saye","raw_affiliation_strings":["Institut National de Recherche en Sant\u00e9 Publique, Bamako, Mali"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut National de Recherche en Sant\u00e9 Publique, Bamako, Mali","institution_ids":["https://openalex.org/I4210088869"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028940846","display_name":"Justin K. Chatigre","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Justin K. Chatigre","raw_affiliation_strings":["H\u00f4pital M\u00eathodiste de Dabou, Dabou, C\u00f4te d'Ivoire","H\u00f4pital M\u00eathodiste de Dabou, Dabou, C\u00f4te"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"H\u00f4pital M\u00eathodiste de Dabou, Dabou, C\u00f4te d'Ivoire","institution_ids":[]},{"raw_affiliation_string":"H\u00f4pital M\u00eathodiste de Dabou, Dabou, C\u00f4te","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067569019","display_name":"Eliezer Kouakou N'Goran","orcid":"https://orcid.org/0000-0002-8761-1933","observed_orcids":["https://orcid.org/0000-0002-8761-1933"]},"institutions":[{"id":"https://openalex.org/I4210130057","display_name":"Swiss Centre for Scientific Research","ror":"https://ror.org/03sttqc46","country_code":"CI","type":"nonprofit","lineage":["https://openalex.org/I4210130057"]},{"id":"https://openalex.org/I48615539","display_name":"Universit\u00e9 F\u00e9lix Houphou\u00ebt-Boigny","ror":"https://ror.org/03haqmz43","country_code":"CI","type":"education","lineage":["https://openalex.org/I48615539"]}],"countries":["CI"],"is_corresponding":false,"raw_author_name":"Eli\u00e9zer K. N\u2019Goran","raw_affiliation_strings":["Centre Suisse de Recherches Scientifiques en C\u00f4te d'Ivoire, Abidjan, C\u00f4te d'Ivoire","Unit\u00e9 de Formation et de Recherche Biosciences, Universit\u00e9 F\u00e9lix Houphou\u00ebt-Boigny, Abidjan, C\u00f4te d'Ivoire","Unit\u00e9 de Formation et de Recherche Biosciences, Universit\u00e9 F\u00e9lix Houphou\u00ebt-Boigny, Abidjan, C\u00f4te"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre Suisse de Recherches Scientifiques en C\u00f4te d'Ivoire, Abidjan, C\u00f4te d'Ivoire","institution_ids":["https://openalex.org/I4210130057"]},{"raw_affiliation_string":"Unit\u00e9 de Formation et de Recherche Biosciences, Universit\u00e9 F\u00e9lix Houphou\u00ebt-Boigny, Abidjan, C\u00f4te d'Ivoire","institution_ids":["https://openalex.org/I48615539"]},{"raw_affiliation_string":"Unit\u00e9 de Formation et de Recherche Biosciences, Universit\u00e9 F\u00e9lix Houphou\u00ebt-Boigny, Abidjan, C\u00f4te","institution_ids":["https://openalex.org/I48615539"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080779037","display_name":"Joel A. Yao","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210130057","display_name":"Swiss Centre for Scientific Research","ror":"https://ror.org/03sttqc46","country_code":"CI","type":"nonprofit","lineage":["https://openalex.org/I4210130057"]},{"id":"https://openalex.org/I48615539","display_name":"Universit\u00e9 F\u00e9lix Houphou\u00ebt-Boigny","ror":"https://ror.org/03haqmz43","country_code":"CI","type":"education","lineage":["https://openalex.org/I48615539"]}],"countries":["CI"],"is_corresponding":false,"raw_author_name":"Joel A. Yao","raw_affiliation_strings":["Centre Suisse de Recherches Scientifiques en C\u00f4te d'Ivoire, Abidjan, C\u00f4te d'Ivoire","Unit\u00e9 de Formation et de Recherche Biosciences, Universit\u00e9 F\u00e9lix Houphou\u00ebt-Boigny, Abidjan, C\u00f4te d'Ivoire","Unit\u00e9 de Formation et de Recherche Biosciences, Universit\u00e9 F\u00e9lix Houphou\u00ebt-Boigny, Abidjan, C\u00f4te"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre Suisse de Recherches Scientifiques en C\u00f4te d'Ivoire, Abidjan, C\u00f4te d'Ivoire","institution_ids":["https://openalex.org/I4210130057"]},{"raw_affiliation_string":"Unit\u00e9 de Formation et de Recherche Biosciences, Universit\u00e9 F\u00e9lix Houphou\u00ebt-Boigny, Abidjan, C\u00f4te d'Ivoire","institution_ids":["https://openalex.org/I48615539"]},{"raw_affiliation_string":"Unit\u00e9 de Formation et de Recherche Biosciences, Universit\u00e9 F\u00e9lix Houphou\u00ebt-Boigny, Abidjan, C\u00f4te","institution_ids":["https://openalex.org/I48615539"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056057019","display_name":"Basudha Khanal","orcid":"https://orcid.org/0000-0003-4340-6062","observed_orcids":["https://orcid.org/0000-0003-4340-6062"]},"institutions":[{"id":"https://openalex.org/I67702648","display_name":"B.P. Koirala Institute of Health Sciences","ror":"https://ror.org/05et9pf90","country_code":"NP","type":"education","lineage":["https://openalex.org/I67702648"]}],"countries":["NP"],"is_corresponding":false,"raw_author_name":"Basudha Khanal","raw_affiliation_strings":["Department of Microbiology, B P Koirala Institute of Health Sciences, Dharan, Nepal"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology, B P Koirala Institute of Health Sciences, Dharan, Nepal","institution_ids":["https://openalex.org/I67702648"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011796103","display_name":"Kanika Deshpande Koirala","orcid":"https://orcid.org/0000-0002-0346-1887","observed_orcids":["https://orcid.org/0000-0002-0346-1887"]},"institutions":[{"id":"https://openalex.org/I67702648","display_name":"B.P. Koirala Institute of Health Sciences","ror":"https://ror.org/05et9pf90","country_code":"NP","type":"education","lineage":["https://openalex.org/I67702648"]}],"countries":["NP"],"is_corresponding":false,"raw_author_name":"Kanika Koirala","raw_affiliation_strings":["Department of Internal Medicine, B P Koirala Institute of Health Sciences, Dharan, Nepal"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Internal Medicine, B P Koirala Institute of Health Sciences, Dharan, Nepal","institution_ids":["https://openalex.org/I67702648"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103229456","display_name":"Narayan Raj Bhattarai","orcid":"https://orcid.org/0000-0003-1186-2338","observed_orcids":["https://orcid.org/0000-0003-1186-2338"]},"institutions":[{"id":"https://openalex.org/I67702648","display_name":"B.P. Koirala Institute of Health Sciences","ror":"https://ror.org/05et9pf90","country_code":"NP","type":"education","lineage":["https://openalex.org/I67702648"]}],"countries":["NP"],"is_corresponding":false,"raw_author_name":"Narayan R. Bhattarai","raw_affiliation_strings":["Department of Microbiology, B P Koirala Institute of Health Sciences, Dharan, Nepal"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology, B P Koirala Institute of Health Sciences, Dharan, Nepal","institution_ids":["https://openalex.org/I67702648"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5105935542","display_name":"Suman Rijal","orcid":"https://orcid.org/0009-0008-1436-0126","observed_orcids":["https://orcid.org/0009-0008-1436-0126"]},"institutions":[{"id":"https://openalex.org/I67702648","display_name":"B.P. Koirala Institute of Health Sciences","ror":"https://ror.org/05et9pf90","country_code":"NP","type":"education","lineage":["https://openalex.org/I67702648"]}],"countries":["NP"],"is_corresponding":false,"raw_author_name":"Suman Rijal","raw_affiliation_strings":["Department of Internal Medicine, B P Koirala Institute of Health Sciences, Dharan, Nepal"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Internal Medicine, B P Koirala Institute of Health Sciences, Dharan, Nepal","institution_ids":["https://openalex.org/I67702648"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069518872","display_name":"Lutz von M\u00fcller","orcid":"https://orcid.org/0000-0001-9013-4245","observed_orcids":["https://orcid.org/0000-0001-9013-4245"]},"institutions":[{"id":"https://openalex.org/I4210118387","display_name":"Christophorus Kliniken","ror":"https://ror.org/02k8pys83","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210118387"]},{"id":"https://openalex.org/I91712215","display_name":"Saarland University","ror":"https://ror.org/01jdpyv68","country_code":"DE","type":"education","lineage":["https://openalex.org/I91712215"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Lutz von M\u00fcller","raw_affiliation_strings":["Institute for Laboratory Medicine, Microbiology and Hygiene, Christophorus Kliniken, Coesfeld, Germany","Institute of Medical Microbiology and Hygiene, Saarland University, Kirrberger Stra\u00dfe, Building 43, 66421, Homburg/Saar, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Laboratory Medicine, Microbiology and Hygiene, Christophorus Kliniken, Coesfeld, Germany","institution_ids":["https://openalex.org/I4210118387"]},{"raw_affiliation_string":"Institute of Medical Microbiology and Hygiene, Saarland University, Kirrberger Stra\u00dfe, Building 43, 66421, Homburg/Saar, Germany","institution_ids":["https://openalex.org/I91712215"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051431695","display_name":"Emmanuel Bottieau","orcid":"https://orcid.org/0000-0002-5868-7760","observed_orcids":["https://orcid.org/0000-0002-5868-7760"]},"institutions":[{"id":"https://openalex.org/I78281549","display_name":"Instituut voor Tropische Geneeskunde","ror":"https://ror.org/03xq4x896","country_code":"BE","type":"funder","lineage":["https://openalex.org/I78281549"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Emmanuel Bottieau","raw_affiliation_strings":["Department of Clinical Sciences, Institute of Tropical Medicine, Antwerp, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Clinical Sciences, Institute of Tropical Medicine, Antwerp, Belgium","institution_ids":["https://openalex.org/I78281549"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027677067","display_name":"Marleen Boelaert","orcid":"https://orcid.org/0000-0001-8051-6776","observed_orcids":["https://orcid.org/0000-0001-8051-6776"]},"institutions":[{"id":"https://openalex.org/I78281549","display_name":"Instituut voor Tropische Geneeskunde","ror":"https://ror.org/03xq4x896","country_code":"BE","type":"funder","lineage":["https://openalex.org/I78281549"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Marleen Boelaert","raw_affiliation_strings":["Department of Public Health, Institute of Tropical Medicine, Antwerp, Belgium","Marleen Boelaert"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Public Health, Institute of Tropical Medicine, Antwerp, Belgium","institution_ids":["https://openalex.org/I78281549"]},{"raw_affiliation_string":"Marleen Boelaert","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080804875","display_name":"Fran\u00e7ois Chappuis","orcid":"https://orcid.org/0000-0003-0442-7610","observed_orcids":["https://orcid.org/0000-0003-0442-7610"]},"institutions":[{"id":"https://openalex.org/I4210106256","display_name":"University Hospital of Geneva","ror":"https://ror.org/01m1pv723","country_code":"CH","type":"healthcare","lineage":["https://openalex.org/I4210106256"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Fran\u00e7ois Chappuis","raw_affiliation_strings":["Division of Tropical and Humanitarian Medicine, Geneva University Hospitals, Geneva, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Tropical and Humanitarian Medicine, Geneva University Hospitals, Geneva, Switzerland","institution_ids":["https://openalex.org/I4210106256"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111992924","display_name":"Katja Polman","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I78281549","display_name":"Instituut voor Tropische Geneeskunde","ror":"https://ror.org/03xq4x896","country_code":"BE","type":"funder","lineage":["https://openalex.org/I78281549"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Katja Polman","raw_affiliation_strings":["Department of Public Health, Institute of Tropical Medicine, Antwerp, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Public Health, Institute of Tropical Medicine, Antwerp, Belgium","institution_ids":["https://openalex.org/I78281549"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015991419","display_name":"J\u00fcrg Utzinger","orcid":"https://orcid.org/0000-0001-6885-0798","observed_orcids":["https://orcid.org/0000-0001-6885-0798","https://orcid.org/0000-0002-2178-4807"]},"institutions":[{"id":"https://openalex.org/I158937107","display_name":"Swiss Tropical and Public Health Institute","ror":"https://ror.org/03adhka07","country_code":"CH","type":"facility","lineage":["https://openalex.org/I158937107"]},{"id":"https://openalex.org/I1850255","display_name":"University of Basel","ror":"https://ror.org/02s6k3f65","country_code":"CH","type":"education","lineage":["https://openalex.org/I1850255"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"J\u00fcrg Utzinger","raw_affiliation_strings":["Swiss Tropical and Public Health Institute, Allschwil, Switzerland","University of Basel, Basel, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Swiss Tropical and Public Health Institute, Allschwil, Switzerland","institution_ids":["https://openalex.org/I158937107"]},{"raw_affiliation_string":"University of Basel, Basel, Switzerland","institution_ids":["https://openalex.org/I1850255"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5068183127","display_name":"S\u00f6ren L. Becker","orcid":"https://orcid.org/0000-0003-3634-8802","observed_orcids":["https://orcid.org/0000-0003-3634-8802","https://orcid.org/0000-0002-9391-7912"]},"institutions":[{"id":"https://openalex.org/I158937107","display_name":"Swiss Tropical and Public Health Institute","ror":"https://ror.org/03adhka07","country_code":"CH","type":"facility","lineage":["https://openalex.org/I158937107"]},{"id":"https://openalex.org/I1850255","display_name":"University of Basel","ror":"https://ror.org/02s6k3f65","country_code":"CH","type":"education","lineage":["https://openalex.org/I1850255"]},{"id":"https://openalex.org/I91712215","display_name":"Saarland University","ror":"https://ror.org/01jdpyv68","country_code":"DE","type":"education","lineage":["https://openalex.org/I91712215"]}],"countries":["CH","DE"],"is_corresponding":true,"raw_author_name":"S\u00f6ren L. Becker","raw_affiliation_strings":["Institute of Medical Microbiology and Hygiene, Saarland University, Kirrberger Stra\u00dfe, Building 43, 66421, Homburg/Saar, Germany. soeren.becker@uks.eu","Swiss Tropical and Public Health Institute, Allschwil, Switzerland. soeren.becker@uks.eu","University of Basel, Basel, Switzerland. soeren.becker@uks.eu","Institute of Medical Microbiology and Hygiene, Saarland University, Kirrberger Stra\u00dfe, Building 43, 66421 Homburg/Saar, Germany","Swiss Tropical and Public Health Institute, Allschwil, Switzerland","University of Basel, Basel, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Microbiology and Hygiene, Saarland University, Kirrberger Stra\u00dfe, Building 43, 66421, Homburg/Saar, Germany. soeren.becker@uks.eu","institution_ids":["https://openalex.org/I91712215"]},{"raw_affiliation_string":"Swiss Tropical and Public Health Institute, Allschwil, Switzerland. soeren.becker@uks.eu","institution_ids":["https://openalex.org/I158937107"]},{"raw_affiliation_string":"University of Basel, Basel, Switzerland. soeren.becker@uks.eu","institution_ids":["https://openalex.org/I1850255"]},{"raw_affiliation_string":"Institute of Medical Microbiology and Hygiene, Saarland University, Kirrberger Stra\u00dfe, Building 43, 66421 Homburg/Saar, Germany","institution_ids":["https://openalex.org/I91712215"]},{"raw_affiliation_string":"Swiss Tropical and Public Health Institute, Allschwil, Switzerland","institution_ids":["https://openalex.org/I158937107"]},{"raw_affiliation_string":"University of Basel, Basel, Switzerland","institution_ids":["https://openalex.org/I1850255"]}]}],"institutions":[],"countries_distinct_count":6,"institutions_distinct_count":11,"corresponding_author_ids":["https://openalex.org/A5068183127"],"corresponding_institution_ids":["https://openalex.org/I158937107","https://openalex.org/I1850255","https://openalex.org/I91712215"],"apc_list":{"value":2590,"currency":"USD","value_usd":2590},"apc_paid":{"value":2143,"currency":"EUR","value_usd":2311},"fwci":2.7735,"has_fulltext":true,"cited_by_count":9,"citation_normalized_percentile":{"value":0.9070942,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":93,"max":99},"biblio":{"volume":"14","issue":"1","first_page":"10926","last_page":"10926"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10976","display_name":"Viral gastroenteritis research and epidemiology","score":0.8773999810218811,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10976","display_name":"Viral gastroenteritis research and epidemiology","score":0.8773999810218811,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11086","display_name":"Parasitic Infections and Diagnostics","score":0.05979999899864197,"subfield":{"id":"https://openalex.org/subfields/2405","display_name":"Parasitology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10486","display_name":"Salmonella and Campylobacter epidemiology","score":0.053599998354911804,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/persistent-diarrhea","display_name":"persistent diarrhea","score":0.9929999709129333},{"id":"https://openalex.org/keywords/chronic-abdominal-pain","display_name":"chronic abdominal pain","score":0.9340000152587891},{"id":"https://openalex.org/keywords/enteric-pathogens","display_name":"enteric pathogens","score":0.906000018119812},{"id":"https://openalex.org/keywords/multiplex-real-time-pcr","display_name":"multiplex real-time PCR","score":0.9430000185966492},{"id":"https://openalex.org/keywords/enterotoxigenic-escherichia-coli","display_name":"enterotoxigenic Escherichia coli","score":0.906000018119812},{"id":"https://openalex.org/keywords/enteropathogenic-escherichia-coli","display_name":"enteropathogenic Escherichia coli","score":0.8489999771118164},{"id":"https://openalex.org/keywords/campylobacter","display_name":"Campylobacter","score":0.9229999780654907},{"id":"https://openalex.org/keywords/giardia-duodenalis","display_name":"Giardia lamblia","score":0.9959999918937683},{"id":"https://openalex.org/keywords/adenovirus-40-41","display_name":"adenovirus 40/41","score":0.9869999885559082},{"id":"https://openalex.org/keywords/norovirus","display_name":"norovirus","score":0.9980000257492065},{"id":"https://openalex.org/keywords/coinfection","display_name":"co-infection","score":0.6570000052452087},{"id":"https://openalex.org/keywords/resource-limited-settings","display_name":"resource-limited settings","score":0.8080000281333923},{"id":"https://openalex.org/keywords/cote-d-ivoire","display_name":"C\u00f4te d'Ivoire","score":0.9160000085830688},{"id":"https://openalex.org/keywords/mali","display_name":"Mali","score":0.9980000257492065},{"id":"https://openalex.org/keywords/nepal","display_name":"Nepal","score":1.0}],"concepts":[{"id":"https://openalex.org/C3017884845","wikidata":"https://www.wikidata.org/wiki/Q1008","display_name":"Cote d ivoire","level":2,"score":0.712104320526123},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.5469902753829956},{"id":"https://openalex.org/C90583042","wikidata":"https://www.wikidata.org/wiki/Q1952456","display_name":"Multiplex polymerase chain reaction","level":4,"score":0.5466991662979126},{"id":"https://openalex.org/C2780955771","wikidata":"https://www.wikidata.org/wiki/Q183425","display_name":"Abdominal pain","level":2,"score":0.5186630487442017},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.44592395424842834},{"id":"https://openalex.org/C2781188995","wikidata":"https://www.wikidata.org/wiki/Q6934982","display_name":"Multiplex","level":2,"score":0.44531989097595215},{"id":"https://openalex.org/C2779802037","wikidata":"https://www.wikidata.org/wiki/Q40878","display_name":"Diarrhea","level":2,"score":0.4209568500518799},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.4041215777397156},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.38441938161849976},{"id":"https://openalex.org/C49105822","wikidata":"https://www.wikidata.org/wiki/Q176996","display_name":"Polymerase chain reaction","level":3,"score":0.3809714615345001},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.24102923274040222},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.16709917783737183},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.10510104894638062},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.07842174172401428},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C15708023","wikidata":"https://www.wikidata.org/wiki/Q80083","display_name":"Humanities","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000293","descriptor_name":"Adolescent","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000328","descriptor_name":"Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000368","descriptor_name":"Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D002648","descriptor_name":"Child","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002675","descriptor_name":"Child, Preschool","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003967","descriptor_name":"Diarrhea","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D003967","descriptor_name":"Diarrhea","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D003967","descriptor_name":"Diarrhea","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":true},{"descriptor_ui":"D003967","descriptor_name":"Diarrhea","qualifier_ui":"Q000469","qualifier_name":"parasitology","is_major_topic":true},{"descriptor_ui":"D003967","descriptor_name":"Diarrhea","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":true},{"descriptor_ui":"D005243","descriptor_name":"Feces","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D005243","descriptor_name":"Feces","qualifier_ui":"Q000469","qualifier_name":"parasitology","is_major_topic":true},{"descriptor_ui":"D005243","descriptor_name":"Feces","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":true},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007223","descriptor_name":"Infant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007560","descriptor_name":"Cote d'Ivoire","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008302","descriptor_name":"Mali","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D008875","descriptor_name":"Middle Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009390","descriptor_name":"Nepal","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D015746","descriptor_name":"Abdominal Pain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015995","descriptor_name":"Prevalence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016829","descriptor_name":"Giardia lamblia","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016829","descriptor_name":"Giardia lamblia","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D055815","descriptor_name":"Young Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060885","descriptor_name":"Multiplex Polymerase Chain Reaction","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1038/s41598-024-60491-y","doi":"https://doi.org/10.1038/s41598-024-60491-y","is_oa":true,"landing_page_url":"http://dx.doi.org/10.1038/s41598-024-60491-y","pdf_url":"https://www.nature.com/articles/s41598-024-60491-y.pdf","source":{"id":"https://openalex.org/S196734849","display_name":"Scientific Reports","issn_l":"2045-2322","issn":["2045-2322"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific Reports","raw_type":"journal-article"},{"id":"pmh:oai:pubmedcentral.nih.gov:11091045","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11091045","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11091045/pdf/41598_2024_Article_60491.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Sci Rep","raw_type":"Text"},{"id":"pmid:38740833","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38740833","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific reports","raw_type":"Journal Article"},{"id":"pmh:oai:doaj.org/article:025a279535df434d95fd16c3b803f808","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/025a279535df434d95fd16c3b803f808","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Scientific Reports, Vol 14, Iss 1, Pp 1-9 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1038/s41598-024-60491-y","doi":"https://doi.org/10.1038/s41598-024-60491-y","is_oa":true,"landing_page_url":"http://dx.doi.org/10.1038/s41598-024-60491-y","pdf_url":"https://www.nature.com/articles/s41598-024-60491-y.pdf","source":{"id":"https://openalex.org/S196734849","display_name":"Scientific Reports","issn_l":"2045-2322","issn":["2045-2322"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific Reports","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.98580002784729,"display_name":"Good health and well-being"}],"study_designs":[{"id":"https://openalex.org/study-designs/observational-study","display_name":"Observational Study"}],"awards":[{"id":"https://openalex.org/G997575647","display_name":"Syndromic approach to Neglected Infectious Diseases (NID) at primary health care level: an international collaboration on integrated diagnostic-treatment platforms","funder_award_id":"260260","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320323322","display_name":"Universit\u00e4t des Saarlandes","ror":"https://ror.org/01jdpyv68"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4396856941.pdf","grobid_xml":"https://content.openalex.org/works/W4396856941.grobid-xml"},"referenced_works_count":35,"referenced_works":["https://openalex.org/W1821981622","https://openalex.org/W1882081114","https://openalex.org/W1974285350","https://openalex.org/W1978378727","https://openalex.org/W2047799919","https://openalex.org/W2083056536","https://openalex.org/W2110878250","https://openalex.org/W2114053580","https://openalex.org/W2122796622","https://openalex.org/W2133290730","https://openalex.org/W2148255012","https://openalex.org/W2171475272","https://openalex.org/W2218772850","https://openalex.org/W2331708991","https://openalex.org/W2470156951","https://openalex.org/W2517537585","https://openalex.org/W2548592091","https://openalex.org/W2548848732","https://openalex.org/W2563001009","https://openalex.org/W2620681788","https://openalex.org/W2740642914","https://openalex.org/W2785669008","https://openalex.org/W2807735066","https://openalex.org/W2809442548","https://openalex.org/W2891808294","https://openalex.org/W2892815535","https://openalex.org/W2893167551","https://openalex.org/W2963888280","https://openalex.org/W2982702311","https://openalex.org/W2990213505","https://openalex.org/W3022571141","https://openalex.org/W3157164017","https://openalex.org/W4210750534","https://openalex.org/W4366351631","https://openalex.org/W4366353489"],"related_works":["https://openalex.org/W1882081114","https://openalex.org/W2965996479","https://openalex.org/W2748851465","https://openalex.org/W2745819352","https://openalex.org/W3159448081","https://openalex.org/W6938933615","https://openalex.org/W2589064248","https://openalex.org/W1964154896","https://openalex.org/W4391603064","https://openalex.org/W4320717459"],"abstract_inverted_index":{"In":[0,26,88],"contrast":[1],"to":[2,73,82,176],"acute":[3],"diarrhoea,":[4],"the":[5,62,91,105,114,137],"aetiology":[6],"of":[7,64],"persistent":[8],"digestive":[9],"disorders":[10],"(\u2265":[11],"14":[12],"days)":[13],"is":[14],"poorly":[15],"understood":[16],"in":[17,42,52,69,77,86,136,144,152,160],"low-resource":[18],"settings":[19],"and":[20,39,48,56,80,98,110,126,134,141,155,171,180,193],"conventional":[21],"diagnostic":[22],"approaches":[23],"lack":[24],"accuracy.":[25],"this":[27],"multi-country":[28],"study,":[29],"we":[30],"compared":[31],"multiplex":[32,184],"real-time":[33],"PCR":[34,185],"for":[35,131,142,187],"enteric":[36,169],"bacterial,":[37],"parasitic":[38],"viral":[40,118],"pathogens":[41,66,170],"stool":[43,60],"samples":[44],"from":[45],"symptomatic":[46,125,179],"patients":[47],"matched":[49],"asymptomatic":[50,127,181],"controls":[51],"C\u00f4te":[53,78,153],"d'Ivoire,":[54],"Mali":[55],"Nepal.":[57,87,145,161],"Among":[58],"1826":[59],"samples,":[61],"prevalence":[63],"most":[65,92,115],"was":[67,104,113,150],"highest":[68],"Mali,":[70,156],"being":[71],"up":[72,81],"threefold":[74],"higher":[75,84],"than":[76,85],"d'Ivoire":[79,154],"tenfold":[83],"all":[89],"settings,":[90],"prevalent":[93],"bacteria":[94],"were":[95,129],"EAEC":[96],"(13.0-39.9%)":[97],"Campylobacter":[99],"spp.":[100],"(3.9-35.3%).":[101],"Giardia":[102],"intestinalis":[103],"predominant":[106],"intestinal":[107],"protozoon":[108],"(2.9-20.5%),":[109],"adenovirus":[111],"40/41":[112],"frequently":[116],"observed":[117,130,163],"pathogen":[119,148],"(6.3-25.1%).":[120],"Significantly":[121],"different":[122,191],"prevalences":[123],"between":[124,178,190],"individuals":[128],"Campylobacter,":[132],"EIEC":[133],"ETEC":[135],"two":[138],"African":[139],"sites,":[140],"norovirus":[143],"Multiple":[146],"species":[147],"infection":[149],"common":[151],"but":[157],"rarely":[158],"found":[159],"We":[162],"that":[164],"molecular":[165],"testing":[166],"detected":[167],"multiple":[168],"showed":[172],"low":[173],"discriminatory":[174],"accuracy":[175],"distinguish":[177],"individuals.":[182],"Yet,":[183],"allowed":[186],"direct":[188],"comparison":[189],"countries":[192],"revealed":[194],"considerable":[195],"setting-specificity.":[196]},"counts_by_year":[{"year":2026,"cited_by_count":7},{"year":2024,"cited_by_count":2}],"updated_date":"2026-11-07T11:25:07.637180","created_date":"2024-05-14T00:00:00"}