{"id":"https://openalex.org/W4396770623","doi":"https://doi.org/10.1128/iai.00103-24","title":"A correlative study of the genomic underpinning of virulence traits and drug tolerance of Candida auris","display_name":"A correlative study of the genomic underpinning of virulence traits and drug tolerance of Candida auris","publication_year":2024,"publication_date":"2024-05-09","ids":{"openalex":"https://openalex.org/W4396770623","doi":"https://doi.org/10.1128/iai.00103-24","pmid":"https://pubmed.ncbi.nlm.nih.gov/38722168","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/11326119"},"language":"en","primary_location":{"id":"doi:10.1128/iai.00103-24","doi":"https://doi.org/10.1128/iai.00103-24","is_oa":true,"landing_page_url":"https://doi.org/10.1128/iai.00103-24","pdf_url":null,"source":{"id":"https://openalex.org/S128227336","display_name":"Infection and Immunity","issn_l":"0019-9567","issn":["0019-9567","1070-6313","1098-5522"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Infection and Immunity","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1128/iai.00103-24","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5026326690","display_name":"Bo Yang","orcid":"https://orcid.org/0000-0002-2118-2566","observed_orcids":["https://orcid.org/0000-0002-2118-2566"]},"institutions":[{"id":"https://openalex.org/I107077323","display_name":"Worcester Polytechnic Institute","ror":"https://ror.org/05ejpqr48","country_code":"US","type":"education","lineage":["https://openalex.org/I107077323"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bo Yang","raw_affiliation_strings":["Worcester Polytechnic Institute, United States","Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, Massachusetts, USA"],"raw_orcid":"https://orcid.org/0000-0002-2118-2566","affiliations":[{"raw_affiliation_string":"Worcester Polytechnic Institute, United States","institution_ids":["https://openalex.org/I107077323"]},{"raw_affiliation_string":"Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, Massachusetts, USA","institution_ids":["https://openalex.org/I107077323"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087037381","display_name":"Benjamin Vaisvil","orcid":"https://orcid.org/0000-0003-1688-0295","observed_orcids":["https://orcid.org/0000-0003-1688-0295"]},"institutions":[{"id":"https://openalex.org/I4210163099","display_name":"Igenbio (United States)","ror":"https://ror.org/057t4ts30","country_code":"US","type":"company","lineage":["https://openalex.org/I4210163099"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Benjamin Vaisvil","raw_affiliation_strings":["Igenbio, Inc., United States","Igenbio, Inc., Chicago, Illinois, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Igenbio, Inc., United States","institution_ids":["https://openalex.org/I4210163099"]},{"raw_affiliation_string":"Igenbio, Inc., Chicago, Illinois, USA","institution_ids":["https://openalex.org/I4210163099"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039222213","display_name":"Daniel P. Schmitt","orcid":"https://orcid.org/0009-0002-6057-5669","observed_orcids":["https://orcid.org/0009-0002-6057-5669"]},"institutions":[{"id":"https://openalex.org/I4210163099","display_name":"Igenbio (United States)","ror":"https://ror.org/057t4ts30","country_code":"US","type":"company","lineage":["https://openalex.org/I4210163099"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel Schmitt","raw_affiliation_strings":["Igenbio, Inc., United States","Igenbio, Inc., Chicago, Illinois, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Igenbio, Inc., United States","institution_ids":["https://openalex.org/I4210163099"]},{"raw_affiliation_string":"Igenbio, Inc., Chicago, Illinois, USA","institution_ids":["https://openalex.org/I4210163099"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Joseph Collins","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I107077323","display_name":"Worcester Polytechnic Institute","ror":"https://ror.org/05ejpqr48","country_code":"US","type":"education","lineage":["https://openalex.org/I107077323"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joseph Collins","raw_affiliation_strings":["Worcester Polytechnic Institute, United States","Department of Chemical Engineering, Worcester Polytechnic Institute, Worcester, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Worcester Polytechnic Institute, United States","institution_ids":["https://openalex.org/I107077323"]},{"raw_affiliation_string":"Department of Chemical Engineering, Worcester Polytechnic Institute, Worcester, Massachusetts, USA","institution_ids":["https://openalex.org/I107077323"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065352549","display_name":"Eric M. Young","orcid":"https://orcid.org/0000-0001-5276-2873","observed_orcids":["https://orcid.org/0000-0001-5276-2873"]},"institutions":[{"id":"https://openalex.org/I107077323","display_name":"Worcester Polytechnic Institute","ror":"https://ror.org/05ejpqr48","country_code":"US","type":"education","lineage":["https://openalex.org/I107077323"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Eric Young","raw_affiliation_strings":["Worcester Polytechnic Institute, United States","Department of Chemical Engineering, Worcester Polytechnic Institute, Worcester, Massachusetts, USA"],"raw_orcid":"https://orcid.org/0000-0001-5276-2873","affiliations":[{"raw_affiliation_string":"Worcester Polytechnic Institute, United States","institution_ids":["https://openalex.org/I107077323"]},{"raw_affiliation_string":"Department of Chemical Engineering, Worcester Polytechnic Institute, Worcester, Massachusetts, USA","institution_ids":["https://openalex.org/I107077323"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044903709","display_name":"Vinayak Kapatral","orcid":"https://orcid.org/0000-0002-0501-3738","observed_orcids":["https://orcid.org/0000-0002-0501-3738"]},"institutions":[{"id":"https://openalex.org/I4210163099","display_name":"Igenbio (United States)","ror":"https://ror.org/057t4ts30","country_code":"US","type":"company","lineage":["https://openalex.org/I4210163099"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vinayak Kapatral","raw_affiliation_strings":["Igenbio, Inc., United States","Igenbio, Inc., Chicago, Illinois, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Igenbio, Inc., United States","institution_ids":["https://openalex.org/I4210163099"]},{"raw_affiliation_string":"Igenbio, Inc., Chicago, Illinois, USA","institution_ids":["https://openalex.org/I4210163099"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5023472225","display_name":"Reeta P. Rao","orcid":"https://orcid.org/0000-0001-7936-9617","observed_orcids":["https://orcid.org/0000-0001-7936-9617"]},"institutions":[{"id":"https://openalex.org/I107077323","display_name":"Worcester Polytechnic Institute","ror":"https://ror.org/05ejpqr48","country_code":"US","type":"education","lineage":["https://openalex.org/I107077323"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Reeta Rao","raw_affiliation_strings":["Worcester Polytechnic Institute, United States","Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, Massachusetts, USA"],"raw_orcid":"https://orcid.org/0000-0001-7936-9617","affiliations":[{"raw_affiliation_string":"Worcester Polytechnic Institute, United States","institution_ids":["https://openalex.org/I107077323"]},{"raw_affiliation_string":"Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, Massachusetts, USA","institution_ids":["https://openalex.org/I107077323"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5023472225"],"corresponding_institution_ids":["https://openalex.org/I107077323"],"apc_list":null,"apc_paid":null,"fwci":2.4048,"has_fulltext":true,"cited_by_count":7,"citation_normalized_percentile":{"value":0.88182267,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"92","issue":"6","first_page":"e0010324","last_page":"e0010324"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10150","display_name":"Antifungal resistance and susceptibility","score":0.9589999914169312,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10150","display_name":"Antifungal resistance and susceptibility","score":0.9589999914169312,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10497","display_name":"Fungal and yeast genetics research","score":0.03799999877810478,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11037","display_name":"Fungal Infections and Studies","score":0.0012000000569969416,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/candida-auris","display_name":"Candida auris","score":1.0},{"id":"https://openalex.org/keywords/antifungal-resistance","display_name":"antifungal resistance","score":0.925000011920929},{"id":"https://openalex.org/keywords/virulence","display_name":"virulence","score":0.7149999737739563},{"id":"https://openalex.org/keywords/galactose-metabolism","display_name":"galactose metabolism","score":0.6430000066757202},{"id":"https://openalex.org/keywords/rhamnose-metabolism","display_name":"rhamnose metabolism","score":0.8100000023841858},{"id":"https://openalex.org/keywords/macrophage-evasion","display_name":"macrophage evasion","score":0.7279999852180481},{"id":"https://openalex.org/keywords/beta-1-3-glucan","display_name":"\u03b2-1,3-glucan","score":0.9169999957084656},{"id":"https://openalex.org/keywords/host-immune-evasion","display_name":"host immune evasion","score":0.6620000004768372},{"id":"https://openalex.org/keywords/gene-expression","display_name":"gene expression","score":0.5789999961853027},{"id":"https://openalex.org/keywords/transcriptomics","display_name":"transcriptomics","score":0.37700000405311584},{"id":"https://openalex.org/keywords/membrane-composition","display_name":"membrane composition","score":0.4320000112056732}],"concepts":[{"id":"https://openalex.org/C2909786013","wikidata":"https://www.wikidata.org/wiki/Q26816853","display_name":"Candida auris","level":3,"score":0.885587215423584},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.847123920917511},{"id":"https://openalex.org/C60987743","wikidata":"https://www.wikidata.org/wiki/Q1460232","display_name":"Virulence","level":3,"score":0.6365585327148438},{"id":"https://openalex.org/C3019170707","wikidata":"https://www.wikidata.org/wiki/Q6471530","display_name":"Fungal pathogen","level":3,"score":0.6299451589584351},{"id":"https://openalex.org/C3020434087","wikidata":"https://www.wikidata.org/wiki/Q835718","display_name":"Opportunistic pathogen","level":4,"score":0.5780113935470581},{"id":"https://openalex.org/C2780871342","wikidata":"https://www.wikidata.org/wiki/Q7883752","display_name":"Underpinning","level":2,"score":0.4997882843017578},{"id":"https://openalex.org/C2776460866","wikidata":"https://www.wikidata.org/wiki/Q170065","display_name":"Pathogen","level":2,"score":0.44344767928123474},{"id":"https://openalex.org/C138816342","wikidata":"https://www.wikidata.org/wiki/Q189603","display_name":"Public health","level":2,"score":0.423638254404068},{"id":"https://openalex.org/C2991737395","wikidata":"https://www.wikidata.org/wiki/Q578726","display_name":"Antifungal drug","level":3,"score":0.42191651463508606},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.3787474036216736},{"id":"https://openalex.org/C2779548794","wikidata":"https://www.wikidata.org/wiki/Q578726","display_name":"Antifungal","level":2,"score":0.24933138489723206},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.15986749529838562},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0855749249458313},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.08504793047904968},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0774196982383728},{"id":"https://openalex.org/C147176958","wikidata":"https://www.wikidata.org/wiki/Q77590","display_name":"Civil engineering","level":1,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000088063","descriptor_name":"Candida auris","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":true},{"descriptor_ui":"D000088063","descriptor_name":"Candida auris","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000935","descriptor_name":"Antifungal Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":true},{"descriptor_ui":"D002177","descriptor_name":"Candidiasis","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D002177","descriptor_name":"Candidiasis","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008264","descriptor_name":"Macrophages","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D008264","descriptor_name":"Macrophages","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D014774","descriptor_name":"Virulence","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015966","descriptor_name":"Gene Expression Regulation, Fungal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016681","descriptor_name":"Genome, Fungal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025141","descriptor_name":"Drug Resistance, Fungal","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1128/iai.00103-24","doi":"https://doi.org/10.1128/iai.00103-24","is_oa":true,"landing_page_url":"https://doi.org/10.1128/iai.00103-24","pdf_url":null,"source":{"id":"https://openalex.org/S128227336","display_name":"Infection and Immunity","issn_l":"0019-9567","issn":["0019-9567","1070-6313","1098-5522"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Infection and Immunity","raw_type":"journal-article"},{"id":"doi:10.1101/2023.04.07.536049","doi":"https://doi.org/10.1101/2023.04.07.536049","is_oa":true,"landing_page_url":"https://doi.org/10.1101/2023.04.07.536049","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2023/04/07/2023.04.07.536049.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},{"id":"pmh:oai:pubmedcentral.nih.gov:11326119","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11326119","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11326119/pdf/iai.00103-24.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Infect Immun","raw_type":"Text"},{"id":"pmid:38722168","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38722168","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Infection and immunity","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1128/iai.00103-24","doi":"https://doi.org/10.1128/iai.00103-24","is_oa":true,"landing_page_url":"https://doi.org/10.1128/iai.00103-24","pdf_url":null,"source":{"id":"https://openalex.org/S128227336","display_name":"Infection and Immunity","issn_l":"0019-9567","issn":["0019-9567","1070-6313","1098-5522"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Infection and Immunity","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.8560000061988831}],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":108,"referenced_works":["https://openalex.org/W1506733194","https://openalex.org/W1514998738","https://openalex.org/W1817471568","https://openalex.org/W1820704259","https://openalex.org/W1821298691","https://openalex.org/W1915738035","https://openalex.org/W1971126857","https://openalex.org/W1973518361","https://openalex.org/W1979435687","https://openalex.org/W1987095367","https://openalex.org/W1988825409","https://openalex.org/W1995204321","https://openalex.org/W1999556953","https://openalex.org/W2003672769","https://openalex.org/W2004093637","https://openalex.org/W2004949243","https://openalex.org/W2009943545","https://openalex.org/W2011778409","https://openalex.org/W2019254756","https://openalex.org/W2022006512","https://openalex.org/W2022326366","https://openalex.org/W2038421207","https://openalex.org/W2045735637","https://openalex.org/W2047353733","https://openalex.org/W2049669623","https://openalex.org/W2055043387","https://openalex.org/W2060880575","https://openalex.org/W2067727396","https://openalex.org/W2074233079","https://openalex.org/W2085781469","https://openalex.org/W2090264280","https://openalex.org/W2091452473","https://openalex.org/W2091689591","https://openalex.org/W2096037926","https://openalex.org/W2100011933","https://openalex.org/W2105033070","https://openalex.org/W2112818210","https://openalex.org/W2120365200","https://openalex.org/W2125347557","https://openalex.org/W2133644564","https://openalex.org/W2137959581","https://openalex.org/W2140333814","https://openalex.org/W2141210456","https://openalex.org/W2144149632","https://openalex.org/W2146126849","https://openalex.org/W2152448670","https://openalex.org/W2154592170","https://openalex.org/W2156117266","https://openalex.org/W2157686762","https://openalex.org/W2158427229","https://openalex.org/W2161676769","https://openalex.org/W2170087779","https://openalex.org/W2179438025","https://openalex.org/W2197124664","https://openalex.org/W2316803818","https://openalex.org/W2323326409","https://openalex.org/W2512706593","https://openalex.org/W2530772399","https://openalex.org/W2536287248","https://openalex.org/W2560839449","https://openalex.org/W2567486199","https://openalex.org/W2734609826","https://openalex.org/W2737691583","https://openalex.org/W2759963422","https://openalex.org/W2765742851","https://openalex.org/W2769713279","https://openalex.org/W2769754674","https://openalex.org/W2791133040","https://openalex.org/W2794692961","https://openalex.org/W2795884050","https://openalex.org/W2809480880","https://openalex.org/W2810427827","https://openalex.org/W2886356978","https://openalex.org/W2898334442","https://openalex.org/W2899600207","https://openalex.org/W2912602470","https://openalex.org/W2914855062","https://openalex.org/W2940361705","https://openalex.org/W2951622756","https://openalex.org/W2951867871","https://openalex.org/W2953431223","https://openalex.org/W2954137037","https://openalex.org/W2956528092","https://openalex.org/W2961041839","https://openalex.org/W2965872548","https://openalex.org/W2967573308","https://openalex.org/W2981959167","https://openalex.org/W2990346134","https://openalex.org/W2991012415","https://openalex.org/W3003271061","https://openalex.org/W3003585973","https://openalex.org/W3006511740","https://openalex.org/W3016937378","https://openalex.org/W3037529309","https://openalex.org/W3047582300","https://openalex.org/W3081868131","https://openalex.org/W3092176028","https://openalex.org/W3102866798","https://openalex.org/W3119984181","https://openalex.org/W3130607038","https://openalex.org/W3133510119","https://openalex.org/W3174067014","https://openalex.org/W3195242213","https://openalex.org/W4232909036","https://openalex.org/W4241472532","https://openalex.org/W4241938498","https://openalex.org/W4242318543","https://openalex.org/W4324357321"],"related_works":["https://openalex.org/W2951867871","https://openalex.org/W7135192351","https://openalex.org/W7028906842","https://openalex.org/W1817471568","https://openalex.org/W4366984096","https://openalex.org/W4402621453","https://openalex.org/W2950798794","https://openalex.org/W7204072096","https://openalex.org/W4416127421","https://openalex.org/W4398230340"],"abstract_inverted_index":{"ABSTRACT":[0],"Candida":[1,231],"auris":[2,24,78,92,285],"is":[3,26],"an":[4,67],"opportunistic":[5],"fungal":[6],"pathogen":[7],"with":[8,250,258],"high":[9,27],"mortality":[10],"rates":[11],"which":[12,147,163],"presents":[13],"a":[14,123,133,209,226,243,268],"clear":[15],"threat":[16],"to":[17,56,88,139,161,175,232,240],"public":[18],"health.":[19],"The":[20,42],"risk":[21],"of":[22,69,76,184,208,246,255],"C.":[23,77,91,284],"infection":[25],"because":[28],"it":[29],"can":[30],"colonize":[31],"the":[32,39,70,111,115,149,165,194,234],"body,":[33],"resist":[34],"antifungal":[35],"treatment,":[36],"and":[37,72,83,102,154,157,171,213,221,260,274,280],"evade":[38,233],"immune":[40,236,275],"system.":[41],"genetic":[43],"mechanisms":[44],"for":[45,59],"these":[46,180],"traits":[47],"are":[48],"not":[49],"well":[50],"known.":[51],"Identifying":[52],"them":[53],"could":[54],"lead":[55],"new":[57,60],"targets":[58],"treatments.":[61],"To":[62],"this":[63],"end,":[64],"we":[65,113,252],"present":[66],"analysis":[68,183,245],"genetics":[71],"gene":[73,134,150,195],"expression":[74],"patterns":[75],"carbon":[79],"metabolism,":[80],"drug":[81,96,104,172,214,281],"resistance,":[82],"macrophage":[84],"interaction.":[85],"We":[86,143],"chose":[87],"study":[89],"two":[90],"isolates":[93,186,248],"simultaneously,":[94],"one":[95,103],"sensitive":[97],"(B11220":[98],"from":[99,107],"Clade":[100,108],"II)":[101],"resistant":[105],"(B11221":[106],"III).":[109],"Comparing":[110],"genomes,":[112],"confirm":[114],"previously":[116],"reported":[117],"finding":[118],"that":[119,145,193,229],"B11220":[120,176],"was":[121,197],"missing":[122],"12.8":[124],"kb":[125],"region":[126,131],"on":[127,188,201],"chromosome":[128],"VI.":[129],"This":[130],"contains":[132],"cluster":[135,196],"encoding":[136],"proteins":[137],"related":[138],"alternative":[140],"sugar":[141,278],"utilization.":[142],"show":[144,267],"B11221,":[146],"has":[148],"cluster,":[151],"readily":[152],"assimilates":[153],"utilizes":[155],"D-galactose":[156],"L-rhamnose":[158],"as":[159,238],"compared":[160,174,239],"B11220,":[162],"harbors":[164],"deletion.":[166],"B11221":[167,216],"exhibits":[168,222],"increased":[169],"adherence":[170],"resistance":[173],"when":[177,199],"grown":[178,187,200],"in":[179,263,283],"sugars.":[181],"Transcriptomic":[182],"both":[185,247],"glucose":[189],"or":[190],"galactose":[191],"showed":[192],"upregulated":[198],"D-galactose.":[202],"These":[203],"findings":[204],"reinforce":[205],"growing":[206],"evidence":[207],"link":[210],"between":[211,271],"metabolism":[212],"tolerance.":[215],"resists":[217],"phagocytosis":[218],"by":[219],"macrophages":[220],"decreased":[223],"\u03b2-1,3-glucan":[224],"exposure,":[225],"key":[227],"determinant":[228],"allows":[230],"host":[235],"system,":[237],"B11220.":[241],"In":[242],"transcriptomic":[244],"co-cultured":[249],"macrophages,":[251],"find":[253],"upregulation":[254],"genes":[256],"associated":[257],"transport":[259],"transcription":[261],"factors":[262],"B11221.":[264],"Our":[265],"studies":[266],"positive":[269],"correlation":[270],"membrane":[272],"composition":[273],"evasion,":[276],"alternate":[277],"utilization,":[279],"tolerance":[282],".":[286]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1}],"updated_date":"2026-10-31T12:09:11.096373","created_date":"2024-05-10T00:00:00"}
