{"id":"https://openalex.org/W4394548277","doi":"https://doi.org/10.6084/m9.figshare.12023685","title":"Additional file 15 of A pipeline for targeted metagenomics of environmental bacteria","display_name":"Additional file 15 of A pipeline for targeted metagenomics of environmental bacteria","publication_year":2020,"publication_date":"2020-01-01","ids":{"openalex":"https://openalex.org/W4394548277","doi":"https://doi.org/10.6084/m9.figshare.12023685"},"language":"en","primary_location":{"id":"pmh:oai:figshare.com:article/12023685","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/Additional_file_15_of_A_pipeline_for_targeted_metagenomics_of_environmental_bacteria/12023685","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"volume":null,"type":"dataset","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://figshare.com/articles/Additional_file_15_of_A_pipeline_for_targeted_metagenomics_of_environmental_bacteria/12023685","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043079392","display_name":"Anissa Grieb","orcid":"https://orcid.org/0000-0003-0601-2953","observed_orcids":["https://orcid.org/0000-0003-0601-2953"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Grieb, Anissa","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080007221","display_name":"Robert M. Bowers","orcid":"https://orcid.org/0000-0002-0028-0407","observed_orcids":["https://orcid.org/0000-0002-0028-0407"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Bowers, Robert M.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072225866","display_name":"Monike Oggerin","orcid":"https://orcid.org/0000-0002-5130-611X","observed_orcids":["https://orcid.org/0000-0002-5130-611X"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Monike Oggerin","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039430803","display_name":"Danielle Goudeau","orcid":"https://orcid.org/0000-0002-3785-032X","observed_orcids":["https://orcid.org/0000-0002-3785-032X"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Goudeau, Danielle","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077210175","display_name":"Janey Lee","orcid":"https://orcid.org/0000-0001-9480-914X","observed_orcids":["https://orcid.org/0000-0001-9480-914X"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Lee, Janey","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019277714","display_name":"Rex R. Malmstrom","orcid":"https://orcid.org/0000-0002-4758-7369","observed_orcids":["https://orcid.org/0000-0002-4758-7369"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Malmstrom, Rex R.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006298901","display_name":"Tanja Woyke","orcid":"https://orcid.org/0000-0002-9485-5637","observed_orcids":["https://orcid.org/0000-0002-9485-5637"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Woyke, Tanja","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5056228868","display_name":"Bernhard Maximilian Fuchs","orcid":"https://orcid.org/0000-0001-9828-1290","observed_orcids":["https://orcid.org/0000-0001-9828-1290"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Fuchs, Bernhard M.","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0001-9828-1290","affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9125999808311462,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9125999808311462,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.07209999859333038,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12640","display_name":"Environmental DNA in Biodiversity Studies","score":0.009100000374019146,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/targeted-metagenomics","display_name":"targeted metagenomics","score":0.9769999980926514},{"id":"https://openalex.org/keywords/environmental-bacteria","display_name":"environmental bacteria","score":0.9739999771118164},{"id":"https://openalex.org/keywords/anvi-o","display_name":"anvi'o","score":0.6579999923706055},{"id":"https://openalex.org/keywords/genome-binning","display_name":"genome binning","score":0.7289999723434448},{"id":"https://openalex.org/keywords/genome-completeness","display_name":"genome completeness","score":0.7549999952316284},{"id":"https://openalex.org/keywords/contamination","display_name":"contamination","score":0.859000027179718},{"id":"https://openalex.org/keywords/strain-heterogeneity","display_name":"strain heterogeneity","score":0.9300000071525574},{"id":"https://openalex.org/keywords/metagenome-assembled-genomes","display_name":"metagenome-assembled genomes","score":0.7059999704360962}],"concepts":[{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.9280680418014526},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.7128994464874268},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5160874724388123},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.49800944328308105},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3957192003726959},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3484329581260681},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.13564032316207886},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.12024810910224915},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.05293545126914978}],"mesh":[],"locations_count":3,"locations":[{"id":"pmh:oai:figshare.com:article/12023685","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/Additional_file_15_of_A_pipeline_for_targeted_metagenomics_of_environmental_bacteria/12023685","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.12023685","doi":"https://doi.org/10.6084/m9.figshare.12023685","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.12023685","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.12023685.v1","doi":"https://doi.org/10.6084/m9.figshare.12023685.v1","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.12023685.v1","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"pmh:oai:figshare.com:article/12023685","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/Additional_file_15_of_A_pipeline_for_targeted_metagenomics_of_environmental_bacteria/12023685","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4394200089","https://openalex.org/W4394511917","https://openalex.org/W4394474507","https://openalex.org/W4366380252","https://openalex.org/W4368228239","https://openalex.org/W3216769402","https://openalex.org/W2001561488","https://openalex.org/W7161816517","https://openalex.org/W2740131984","https://openalex.org/W6908592696"],"abstract_inverted_index":{"Additional":[0],"file":[1],"15:":[2],"Table":[3],"S2.":[4],"Sample":[5],"description":[6],"and":[7,20],"statistics":[8],"of":[9],"Anvi'o":[10],"binned":[11],"assemblies":[12],"from":[13],"sorted":[14],"Vis6":[15],"samples.":[16],"Marker_lineage,":[17],"completeness,":[18],"contamination":[19],"strain":[21],"heterogeneity":[22],"were":[23],"assessed":[24],"with":[25],"checkM.":[26]},"counts_by_year":[],"updated_date":"2026-10-08T09:06:37.294493","created_date":"2024-04-08T00:00:00"}
