{"id":"https://openalex.org/W4394529782","doi":"https://doi.org/10.6084/m9.figshare.c.3596681_d1","title":"Additional file 3: of Parallel or convergent evolution in human population genomic data revealed by genotype networks","display_name":"Additional file 3: of Parallel or convergent evolution in human population genomic data revealed by genotype networks","publication_year":2016,"publication_date":"2016-01-01","ids":{"openalex":"https://openalex.org/W4394529782","doi":"https://doi.org/10.6084/m9.figshare.c.3596681_d1"},"language":"en","primary_location":{"id":"pmh:oai:figshare.com:article/4319564","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_3_of_Parallel_or_convergent_evolution_in_human_population_genomic_data_revealed_by_genotype_networks/4319564","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"volume":null,"type":"dataset","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://figshare.com/articles/dataset/Additional_file_3_of_Parallel_or_convergent_evolution_in_human_population_genomic_data_revealed_by_genotype_networks/4319564","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5037958280","display_name":"Ali Reza Vahdati","orcid":"https://orcid.org/0000-0003-0895-1495","observed_orcids":["https://orcid.org/0000-0003-0895-1495"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Vahdati, Ali R.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5079730045","display_name":"Andreas Wagner","orcid":"https://orcid.org/0000-0003-4299-3840","observed_orcids":["https://orcid.org/0000-0003-4299-3840"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Wagner, Andreas","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10751","display_name":"Forensic and Genetic Research","score":0.5083000063896179,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10751","display_name":"Forensic and Genetic Research","score":0.5083000063896179,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.20970000326633453,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.12409999966621399,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/parallel-evolution","display_name":"parallel evolution","score":0.8709999918937683},{"id":"https://openalex.org/keywords/convergent-evolution","display_name":"convergent evolution","score":0.9959999918937683},{"id":"https://openalex.org/keywords/genotype-networks","display_name":"genotype networks","score":0.9380000233650208},{"id":"https://openalex.org/keywords/haplotype-network","display_name":"haplotype network","score":0.9419999718666077},{"id":"https://openalex.org/keywords/human-population-genomics","display_name":"human population genomics","score":0.8600000143051147},{"id":"https://openalex.org/keywords/network-fragmentation","display_name":"network fragmentation","score":0.47600001096725464},{"id":"https://openalex.org/keywords/gene-ontology-enrichment","display_name":"gene ontology enrichment","score":0.871999979019165},{"id":"https://openalex.org/keywords/kegg-pathway-enrichment","display_name":"KEGG pathway enrichment","score":0.9139999747276306},{"id":"https://openalex.org/keywords/reactome-pathway-enrichment","display_name":"Reactome pathway enrichment","score":0.8690000176429749},{"id":"https://openalex.org/keywords/hla-genes","display_name":"HLA genes","score":0.8360000252723694},{"id":"https://openalex.org/keywords/exon-length","display_name":"exon length","score":0.5090000033378601},{"id":"https://openalex.org/keywords/nucleotide-mutations","display_name":"nucleotide mutations","score":0.8859999775886536}],"concepts":[{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.6064870357513428},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4956423044204712},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.42779961228370667},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.396872341632843},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.371425598859787},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.37038150429725647},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3526214361190796},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.12152370810508728},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09670910239219666},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.09232363104820251}],"mesh":[],"locations_count":3,"locations":[{"id":"pmh:oai:figshare.com:article/4319564","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_3_of_Parallel_or_convergent_evolution_in_human_population_genomic_data_revealed_by_genotype_networks/4319564","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.c.3596681_d1","doi":"https://doi.org/10.6084/m9.figshare.c.3596681_d1","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.c.3596681_d1","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.c.3596681_d1.v1","doi":"https://doi.org/10.6084/m9.figshare.c.3596681_d1.v1","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.c.3596681_d1.v1","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"pmh:oai:figshare.com:article/4319564","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_3_of_Parallel_or_convergent_evolution_in_human_population_genomic_data_revealed_by_genotype_networks/4319564","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.4000000059604645,"display_name":"Good health and well-being"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2490504152","https://openalex.org/W6977395983","https://openalex.org/W7137922235","https://openalex.org/W7138056429","https://openalex.org/W2891082546","https://openalex.org/W2067083603","https://openalex.org/W3118059649","https://openalex.org/W7100518125","https://openalex.org/W1983457895","https://openalex.org/W2061912939"],"abstract_inverted_index":{"This":[0],"ZIP":[1],"file":[2],"contains":[3],"the":[4,39,65,86,95,105,120,149,155,158],"following":[5],"documents.":[6],"1.":[7],"genes_with_excess_of_cycles_exonLength_nucleotideMutations.txt:":[8],"List":[9,130],"of":[10,14,58,71,79,92,111,126,131,151,157],"genes":[11,43,67,88,107,122],"with":[12,44,68,89,108,123],"excess":[13,70,91,110,125],"cycles":[15],"when":[16],"randomized":[17],"networks":[18,135,139],"are":[19],"constructed":[20],"from":[21],"entire":[22],"gene":[23],"coding":[24],"sequences":[25],"(all":[26],"four":[27],"nucleotide":[28],"mutations":[29],"allowed).":[30],"2.":[31],"gprofiler_results_100fragmentedGenes_largerthan10.xlsx:":[32],"Gene":[33,54,75],"ontology":[34,55,76],"enrichment":[35,56,77,102,117],"analysis":[36,57,78,103,118],"results":[37],"for":[38,64,85,104,119],"100":[40,132],"most":[41,133],"fragmented":[42,134],"a":[45],"network":[46,159],"comprising":[47,140],"more":[48,141],"than":[49,142],"10":[50,143],"sequences.":[51],"3.":[52],"gprofiler_results_GO_function_process.xlsx:":[53],"molecular":[59,80],"functions":[60,81],"and":[61,82],"biological":[62,83],"processes":[63,84],"42":[66,87,106,121],"an":[69,90,109,124],"cycles.":[72,112,127],"4.":[73],"gprofiler_results_GO_function_process_NoHLAGenes.xlsx:":[74],"cycles,":[93],"excluding":[94],"HLA":[96],"genes.":[97],"5.":[98],"gprofiler_results_KEGG.xlsx:":[99],"KEGG":[100],"pathways":[101,116],"6.":[113],"gprofiler_results_reactome.xlsx:":[114],"Reactome":[115],"7.":[128],"list_of_most_fragmented_networks.txt:":[129],"among":[136],"all":[137],"haplotype":[138],"nodes.":[144],"Fragmentation":[145],"is":[146],"computed":[147],"as":[148],"number":[150],"components":[152],"divided":[153],"by":[154],"size":[156],"(higher":[160],"values":[161],"correspond":[162],"to":[163],"greater":[164],"fragmentation).":[165],"(ZIP":[166],"63":[167],"kb)":[168]},"counts_by_year":[],"updated_date":"2026-10-08T09:06:37.294493","created_date":"2024-04-08T00:00:00"}