{"id":"https://openalex.org/W4394520744","doi":"https://doi.org/10.6084/m9.figshare.21087578","title":"Additional file 1 of Genome-wide detection of copy number variation in American mink using whole-genome sequencing","display_name":"Additional file 1 of Genome-wide detection of copy number variation in American mink using whole-genome sequencing","publication_year":2022,"publication_date":"2022-01-01","ids":{"openalex":"https://openalex.org/W4394520744","doi":"https://doi.org/10.6084/m9.figshare.21087578"},"language":"en","primary_location":{"id":"pmh:oai:figshare.com:article/21087578","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_1_of_Genome-wide_detection_of_copy_number_variation_in_American_mink_using_whole-genome_sequencing/21087578","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"volume":null,"type":"dataset","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://figshare.com/articles/dataset/Additional_file_1_of_Genome-wide_detection_of_copy_number_variation_in_American_mink_using_whole-genome_sequencing/21087578","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5030953695","display_name":"Pourya Davoudi","orcid":"https://orcid.org/0000-0002-0862-5502","observed_orcids":["https://orcid.org/0000-0002-0862-5502"]},"institutions":[{"id":"https://openalex.org/I129902397","display_name":"Dalhousie University","ror":"https://ror.org/01e6qks80","country_code":"CA","type":"education","lineage":["https://openalex.org/I129902397"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Davoudi, Pourya","raw_affiliation_strings":["Dalhousie University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dalhousie University","institution_ids":["https://openalex.org/I129902397"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067051014","display_name":"Duy Ngoc","orcid":"https://orcid.org/0000-0002-5103-4265","observed_orcids":["https://orcid.org/0000-0002-5103-4265"]},"institutions":[{"id":"https://openalex.org/I129902397","display_name":"Dalhousie University","ror":"https://ror.org/01e6qks80","country_code":"CA","type":"education","lineage":["https://openalex.org/I129902397"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Do, Duy Ngoc","raw_affiliation_strings":["Dalhousie University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dalhousie University","institution_ids":["https://openalex.org/I129902397"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055530473","display_name":"Bruce M. Rathgeber","orcid":"https://orcid.org/0000-0003-0654-0713","observed_orcids":["https://orcid.org/0000-0003-0654-0713"]},"institutions":[{"id":"https://openalex.org/I129902397","display_name":"Dalhousie University","ror":"https://ror.org/01e6qks80","country_code":"CA","type":"education","lineage":["https://openalex.org/I129902397"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Rathgeber, Bruce","raw_affiliation_strings":["Dalhousie University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dalhousie University","institution_ids":["https://openalex.org/I129902397"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020739456","display_name":"Stefanie M. Colombo","orcid":"https://orcid.org/0000-0003-1828-7145","observed_orcids":["https://orcid.org/0000-0003-1828-7145"]},"institutions":[{"id":"https://openalex.org/I129902397","display_name":"Dalhousie University","ror":"https://ror.org/01e6qks80","country_code":"CA","type":"education","lineage":["https://openalex.org/I129902397"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Colombo, Stefanie M.","raw_affiliation_strings":["Dalhousie University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dalhousie University","institution_ids":["https://openalex.org/I129902397"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090080840","display_name":"Mehdi Sargolzaei","orcid":"https://orcid.org/0000-0003-3052-0739","observed_orcids":["https://orcid.org/0000-0003-3052-0739"]},"institutions":[{"id":"https://openalex.org/I79817857","display_name":"University of Guelph","ror":"https://ror.org/01r7awg59","country_code":"CA","type":"education","lineage":["https://openalex.org/I79817857"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Sargolzaei, Mehdi","raw_affiliation_strings":["University of Guelph"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Guelph","institution_ids":["https://openalex.org/I79817857"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054871097","display_name":"Graham Stuart Plastow","orcid":"https://orcid.org/0000-0002-3774-3110","observed_orcids":["https://orcid.org/0000-0002-3774-3110"]},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Plastow, Graham","raw_affiliation_strings":["University of Alberta"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Alberta","institution_ids":["https://openalex.org/I154425047"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044334143","display_name":"Zhiquan Wang","orcid":"https://orcid.org/0000-0002-5813-5368","observed_orcids":["https://orcid.org/0000-0002-5813-5368"]},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Wang, Zhiquan","raw_affiliation_strings":["University of Alberta"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Alberta","institution_ids":["https://openalex.org/I154425047"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110463006","display_name":"Karim Karimi","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I129902397","display_name":"Dalhousie University","ror":"https://ror.org/01e6qks80","country_code":"CA","type":"education","lineage":["https://openalex.org/I129902397"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Karimi, Karim","raw_affiliation_strings":["Dalhousie University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dalhousie University","institution_ids":["https://openalex.org/I129902397"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102858099","display_name":"Guoyu Hu","orcid":"https://orcid.org/0000-0003-0293-5080","observed_orcids":["https://orcid.org/0000-0003-0293-5080"]},"institutions":[{"id":"https://openalex.org/I129902397","display_name":"Dalhousie University","ror":"https://ror.org/01e6qks80","country_code":"CA","type":"education","lineage":["https://openalex.org/I129902397"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Hu, Guoyu","raw_affiliation_strings":["Dalhousie University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dalhousie University","institution_ids":["https://openalex.org/I129902397"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059480638","display_name":"Shafagh Valipour","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I129902397","display_name":"Dalhousie University","ror":"https://ror.org/01e6qks80","country_code":"CA","type":"education","lineage":["https://openalex.org/I129902397"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Valipour, Shafagh","raw_affiliation_strings":["Dalhousie University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dalhousie University","institution_ids":["https://openalex.org/I129902397"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5034091757","display_name":"Younes Miar","orcid":"https://orcid.org/0000-0001-9933-5414","observed_orcids":["https://orcid.org/0000-0001-9933-5414"]},"institutions":[{"id":"https://openalex.org/I129902397","display_name":"Dalhousie University","ror":"https://ror.org/01e6qks80","country_code":"CA","type":"education","lineage":["https://openalex.org/I129902397"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Miar, Younes","raw_affiliation_strings":["Dalhousie University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dalhousie University","institution_ids":["https://openalex.org/I129902397"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.9375,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.9375,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.01899999938905239,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.012799999676644802,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/copy-number-variation","display_name":"copy number variation","score":0.949999988079071},{"id":"https://openalex.org/keywords/american-mink","display_name":"American mink","score":0.9990000128746033},{"id":"https://openalex.org/keywords/cnvrs","display_name":"CNVRs","score":0.5070000290870667},{"id":"https://openalex.org/keywords/gene-ontology-enrichment","display_name":"gene ontology enrichment","score":0.746999979019165},{"id":"https://openalex.org/keywords/kegg-pathway-enrichment","display_name":"KEGG pathway enrichment","score":0.9900000095367432},{"id":"https://openalex.org/keywords/whole-genome-sequencing","display_name":"whole genome sequencing","score":0.5950000286102295}],"concepts":[{"id":"https://openalex.org/C2780754187","wikidata":"https://www.wikidata.org/wiki/Q17700","display_name":"Mink","level":2,"score":0.8178936243057251},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6691251993179321},{"id":"https://openalex.org/C2910378429","wikidata":"https://www.wikidata.org/wiki/Q27179","display_name":"American mink","level":3,"score":0.6092045307159424},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6077659130096436},{"id":"https://openalex.org/C120821319","wikidata":"https://www.wikidata.org/wiki/Q1501491","display_name":"Copy-number variation","level":4,"score":0.5334553718566895},{"id":"https://openalex.org/C2778334786","wikidata":"https://www.wikidata.org/wiki/Q1586270","display_name":"Variation (astronomy)","level":2,"score":0.5090184211730957},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.48960667848587036},{"id":"https://openalex.org/C24432333","wikidata":"https://www.wikidata.org/wiki/Q2068526","display_name":"Whole genome sequencing","level":4,"score":0.48547986149787903},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.47626611590385437},{"id":"https://openalex.org/C151020129","wikidata":"https://www.wikidata.org/wiki/Q7625067","display_name":"Structural variation","level":4,"score":0.4399183988571167},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1501321792602539},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0},{"id":"https://openalex.org/C44870925","wikidata":"https://www.wikidata.org/wiki/Q37547","display_name":"Astrophysics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"pmh:oai:figshare.com:article/21087578","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_1_of_Genome-wide_detection_of_copy_number_variation_in_American_mink_using_whole-genome_sequencing/21087578","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.21087578","doi":"https://doi.org/10.6084/m9.figshare.21087578","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.21087578","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.21087578.v1","doi":"https://doi.org/10.6084/m9.figshare.21087578.v1","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.21087578.v1","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"pmh:oai:figshare.com:article/21087578","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_1_of_Genome-wide_detection_of_copy_number_variation_in_American_mink_using_whole-genome_sequencing/21087578","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4295469723","https://openalex.org/W4390501711","https://openalex.org/W4394230651","https://openalex.org/W3207710012","https://openalex.org/W4394163444","https://openalex.org/W4392107087","https://openalex.org/W7203840306","https://openalex.org/W6902051853","https://openalex.org/W1998267090","https://openalex.org/W4388539548"],"abstract_inverted_index":{"Additional":[0],"file":[1],"1:":[2],"Table":[3,14,22,34,47],"S1.":[4],"List":[5,24],"of":[6,18,25,38,42,51,55],"CNVs":[7],"identified":[8],"on":[9],"100":[10],"American":[11,32],"mink":[12],"genomes.":[13],"S2.":[15],"Detail":[16],"information":[17],"the":[19],"detected":[20],"CNVR.":[21,46,59],"S3.":[23],"genes":[26,43,56],"completely/partially":[27],"overlapped":[28],"with":[29],"CNVR":[30],"in":[31],"mink.":[33],"S4.":[35],"Functional":[36,49],"enrichment":[37,50],"gene":[39],"ontology":[40],"analysis":[41,54],"covered":[44,57],"by":[45,58],"S5.":[48],"KEGG":[52],"pathway":[53]},"counts_by_year":[],"updated_date":"2026-10-08T09:06:37.294493","created_date":"2024-04-08T00:00:00"}
