{"id":"https://openalex.org/W4394511599","doi":"https://doi.org/10.6084/m9.figshare.16435831","title":"Additional file 4 of Acute depletion of CTCF rewires genome-wide chromatin accessibility","display_name":"Additional file 4 of Acute depletion of CTCF rewires genome-wide chromatin accessibility","publication_year":2021,"publication_date":"2021-01-01","ids":{"openalex":"https://openalex.org/W4394511599","doi":"https://doi.org/10.6084/m9.figshare.16435831"},"language":"en","primary_location":{"id":"pmh:oai:figshare.com:article/16435831","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_4_of_Acute_depletion_of_CTCF_rewires_genome-wide_chromatin_accessibility/16435831","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"volume":null,"type":"dataset","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://figshare.com/articles/dataset/Additional_file_4_of_Acute_depletion_of_CTCF_rewires_genome-wide_chromatin_accessibility/16435831","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5064409505","display_name":"Beisi Xu","orcid":"https://orcid.org/0000-0003-0099-858X","observed_orcids":["https://orcid.org/0000-0003-0099-858X"]},"institutions":[{"id":"https://openalex.org/I1313298211","display_name":"St. Jude Children's Research Hospital","ror":"https://ror.org/02r3e0967","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1313298211","https://openalex.org/I2802152183"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xu, Beisi","raw_affiliation_strings":["St. Jude Children's Research Hospital"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"St. Jude Children's Research Hospital","institution_ids":["https://openalex.org/I1313298211"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100370940","display_name":"Hong Wang","orcid":"https://orcid.org/0000-0002-6215-6348","observed_orcids":["https://orcid.org/0000-0002-6215-6348"]},"institutions":[{"id":"https://openalex.org/I1313298211","display_name":"St. Jude Children's Research Hospital","ror":"https://ror.org/02r3e0967","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1313298211","https://openalex.org/I2802152183"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Wang, Hong","raw_affiliation_strings":["St. Jude Children's Research Hospital"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"St. Jude Children's Research Hospital","institution_ids":["https://openalex.org/I1313298211"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005586445","display_name":"Shaela Wright","orcid":"https://orcid.org/0000-0003-2213-5515","observed_orcids":["https://orcid.org/0000-0003-2213-5515"]},"institutions":[{"id":"https://openalex.org/I1313298211","display_name":"St. Jude Children's Research Hospital","ror":"https://ror.org/02r3e0967","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1313298211","https://openalex.org/I2802152183"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Wright, Shaela","raw_affiliation_strings":["St. Jude Children's Research Hospital"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"St. Jude Children's Research Hospital","institution_ids":["https://openalex.org/I1313298211"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017204086","display_name":"Judith W. Hyle","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I1313298211","display_name":"St. Jude Children's Research Hospital","ror":"https://ror.org/02r3e0967","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1313298211","https://openalex.org/I2802152183"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hyle, Judith","raw_affiliation_strings":["St. Jude Children's Research Hospital"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"St. Jude Children's Research Hospital","institution_ids":["https://openalex.org/I1313298211"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100354659","display_name":"Yang Zhang","orcid":"https://orcid.org/0000-0002-2739-1916","observed_orcids":["https://orcid.org/0000-0002-2739-1916","https://orcid.org/0000-0002-0789-4938","https://orcid.org/0000-0003-1405-0212"]},"institutions":[{"id":"https://openalex.org/I1313298211","display_name":"St. Jude Children's Research Hospital","ror":"https://ror.org/02r3e0967","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1313298211","https://openalex.org/I2802152183"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zhang, Yang","raw_affiliation_strings":["St. Jude Children's Research Hospital"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"St. Jude Children's Research Hospital","institution_ids":["https://openalex.org/I1313298211"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036555866","display_name":"Ying Shao","orcid":"https://orcid.org/0000-0002-0390-3315","observed_orcids":["https://orcid.org/0000-0002-0390-3315","https://orcid.org/0009-0001-0423-669X"]},"institutions":[{"id":"https://openalex.org/I1313298211","display_name":"St. Jude Children's Research Hospital","ror":"https://ror.org/02r3e0967","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1313298211","https://openalex.org/I2802152183"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shao, Ying","raw_affiliation_strings":["St. Jude Children's Research Hospital"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"St. Jude Children's Research Hospital","institution_ids":["https://openalex.org/I1313298211"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Niu, Mingming","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I1313298211","display_name":"St. Jude Children's Research Hospital","ror":"https://ror.org/02r3e0967","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1313298211","https://openalex.org/I2802152183"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Niu, Mingming","raw_affiliation_strings":["St. Jude Children's Research Hospital"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"St. Jude Children's Research Hospital","institution_ids":["https://openalex.org/I1313298211"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026730026","display_name":"Yiping Fan","orcid":"https://orcid.org/0000-0002-8430-4620","observed_orcids":["https://orcid.org/0000-0002-8430-4620"]},"institutions":[{"id":"https://openalex.org/I1313298211","display_name":"St. Jude Children's Research Hospital","ror":"https://ror.org/02r3e0967","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1313298211","https://openalex.org/I2802152183"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Fan, Yiping","raw_affiliation_strings":["St. Jude Children's Research Hospital"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"St. Jude Children's Research Hospital","institution_ids":["https://openalex.org/I1313298211"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085757220","display_name":"Wojciech Rosikiewicz","orcid":"https://orcid.org/0000-0001-7031-3430","observed_orcids":["https://orcid.org/0000-0001-7031-3430"]},"institutions":[{"id":"https://openalex.org/I1313298211","display_name":"St. Jude Children's Research Hospital","ror":"https://ror.org/02r3e0967","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1313298211","https://openalex.org/I2802152183"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rosikiewicz, Wojciech","raw_affiliation_strings":["St. Jude Children's Research Hospital"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"St. Jude Children's Research Hospital","institution_ids":["https://openalex.org/I1313298211"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016527649","display_name":"Mohamed Nadhir Djekidel","orcid":"https://orcid.org/0000-0001-5361-1858","observed_orcids":["https://orcid.org/0000-0001-5361-1858"]},"institutions":[{"id":"https://openalex.org/I1313298211","display_name":"St. Jude Children's Research Hospital","ror":"https://ror.org/02r3e0967","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1313298211","https://openalex.org/I2802152183"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Djekidel, Mohamed Nadhir","raw_affiliation_strings":["St. Jude Children's Research Hospital"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"St. Jude Children's Research Hospital","institution_ids":["https://openalex.org/I1313298211"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005061089","display_name":"Junmin Peng","orcid":"https://orcid.org/0000-0003-0472-7648","observed_orcids":["https://orcid.org/0000-0003-0472-7648","https://orcid.org/0000-0002-4043-8475"]},"institutions":[{"id":"https://openalex.org/I1313298211","display_name":"St. Jude Children's Research Hospital","ror":"https://ror.org/02r3e0967","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1313298211","https://openalex.org/I2802152183"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Peng, Junmin","raw_affiliation_strings":["St. Jude Children's Research Hospital"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"St. Jude Children's Research Hospital","institution_ids":["https://openalex.org/I1313298211"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Lu, Rui","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I32389192","display_name":"University of Alabama at Birmingham","ror":"https://ror.org/008s83205","country_code":"US","type":"education","lineage":["https://openalex.org/I32389192"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lu, Rui","raw_affiliation_strings":["University of Alabama at Birmingham"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Alabama at Birmingham","institution_ids":["https://openalex.org/I32389192"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5102972645","display_name":"Chunliang Li","orcid":"https://orcid.org/0000-0002-5938-5510","observed_orcids":["https://orcid.org/0000-0002-5938-5510"]},"institutions":[{"id":"https://openalex.org/I1313298211","display_name":"St. Jude Children's Research Hospital","ror":"https://ror.org/02r3e0967","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1313298211","https://openalex.org/I2802152183"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Li, Chunliang","raw_affiliation_strings":["St. Jude Children's Research Hospital"],"raw_orcid":"https://orcid.org/0000-0002-5938-5510","affiliations":[{"raw_affiliation_string":"St. Jude Children's Research Hospital","institution_ids":["https://openalex.org/I1313298211"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9711999893188477,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9711999893188477,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12820","display_name":"Chromatin Remodeling and Cancer","score":0.01640000008046627,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.00419999985024333,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ctcf","display_name":"CTCF","score":0.9819999933242798},{"id":"https://openalex.org/keywords/chromatin-accessibility","display_name":"chromatin accessibility","score":0.9129999876022339},{"id":"https://openalex.org/keywords/dna-methylation","display_name":"DNA methylation","score":0.8460000157356262},{"id":"https://openalex.org/keywords/differentially-methylated-regions","display_name":"differentially methylated regions","score":0.9660000205039978}],"concepts":[{"id":"https://openalex.org/C83640560","wikidata":"https://www.wikidata.org/wiki/Q180951","display_name":"Chromatin","level":3,"score":0.6286229491233826},{"id":"https://openalex.org/C2778760011","wikidata":"https://www.wikidata.org/wiki/Q21163346","display_name":"CTCF","level":5,"score":0.6196904182434082},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5150492191314697},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.48525094985961914},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3727279305458069},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.3579113483428955},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.35581162571907043},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2464417815208435},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.1923888921737671},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08304518461227417},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C111936080","wikidata":"https://www.wikidata.org/wiki/Q913367","display_name":"Enhancer","level":4,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"pmh:oai:figshare.com:article/16435831","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_4_of_Acute_depletion_of_CTCF_rewires_genome-wide_chromatin_accessibility/16435831","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.16435831","doi":"https://doi.org/10.6084/m9.figshare.16435831","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.16435831","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.16435831.v1","doi":"https://doi.org/10.6084/m9.figshare.16435831.v1","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.16435831.v1","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"pmh:oai:figshare.com:article/16435831","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_4_of_Acute_depletion_of_CTCF_rewires_genome-wide_chromatin_accessibility/16435831","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":68,"referenced_works":["https://openalex.org/W1598350571","https://openalex.org/W1873772354","https://openalex.org/W1941076503","https://openalex.org/W1964963969","https://openalex.org/W1965813899","https://openalex.org/W1968362887","https://openalex.org/W1973062929","https://openalex.org/W1984714342","https://openalex.org/W1984827465","https://openalex.org/W1995812436","https://openalex.org/W2010457001","https://openalex.org/W2010536693","https://openalex.org/W2014677321","https://openalex.org/W2037114174","https://openalex.org/W2045203842","https://openalex.org/W2047163519","https://openalex.org/W2056499061","https://openalex.org/W2070509435","https://openalex.org/W2078526277","https://openalex.org/W2082001960","https://openalex.org/W2092992881","https://openalex.org/W2102368172","https://openalex.org/W2106889224","https://openalex.org/W2114570899","https://openalex.org/W2115125191","https://openalex.org/W2117757143","https://openalex.org/W2117792884","https://openalex.org/W2127988376","https://openalex.org/W2131856634","https://openalex.org/W2133332261","https://openalex.org/W2134861134","https://openalex.org/W2135030836","https://openalex.org/W2136603536","https://openalex.org/W2137526110","https://openalex.org/W2138745251","https://openalex.org/W2152218182","https://openalex.org/W2153132589","https://openalex.org/W2156626022","https://openalex.org/W2157009395","https://openalex.org/W2163068365","https://openalex.org/W2171808845","https://openalex.org/W2172174991","https://openalex.org/W2341539131","https://openalex.org/W2345356016","https://openalex.org/W2401568148","https://openalex.org/W2403906864","https://openalex.org/W2587008851","https://openalex.org/W2746667318","https://openalex.org/W2747643030","https://openalex.org/W2793965282","https://openalex.org/W2796842840","https://openalex.org/W2810076504","https://openalex.org/W2898577086","https://openalex.org/W2898772529","https://openalex.org/W2946202802","https://openalex.org/W2946235712","https://openalex.org/W2952479320","https://openalex.org/W2952922579","https://openalex.org/W2967976704","https://openalex.org/W2979678065","https://openalex.org/W2990380375","https://openalex.org/W2992741119","https://openalex.org/W2998399076","https://openalex.org/W2999147745","https://openalex.org/W3026337771","https://openalex.org/W3033332947","https://openalex.org/W3044915966","https://openalex.org/W3090900087"],"related_works":["https://openalex.org/W6939750509","https://openalex.org/W6902146460","https://openalex.org/W4394172535","https://openalex.org/W3196233305","https://openalex.org/W6949500947","https://openalex.org/W4408066714","https://openalex.org/W4408660021","https://openalex.org/W6925841016","https://openalex.org/W4411840613","https://openalex.org/W6968238802"],"abstract_inverted_index":{"Additional":[0],"file":[1],"4:":[2],"Supplementary":[3],"Tables-Tables":[4],"S3.":[5],"DMR":[6],"profiles.":[7]},"counts_by_year":[],"updated_date":"2026-10-29T09:56:32.521200","created_date":"2024-04-08T00:00:00"}
