{"id":"https://openalex.org/W4394458397","doi":"https://doi.org/10.6084/m9.figshare.12284852","title":"Additional file 3 of Defining the relative and combined contribution of CTCF and CTCFL to genomic regulation","display_name":"Additional file 3 of Defining the relative and combined contribution of CTCF and CTCFL to genomic regulation","publication_year":2020,"publication_date":"2020-01-01","ids":{"openalex":"https://openalex.org/W4394458397","doi":"https://doi.org/10.6084/m9.figshare.12284852"},"language":"en","primary_location":{"id":"pmh:oai:figshare.com:article/12284852","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/Additional_file_3_of_Defining_the_relative_and_combined_contribution_of_CTCF_and_CTCFL_to_genomic_regulation/12284852","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"volume":null,"type":"dataset","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://figshare.com/articles/Additional_file_3_of_Defining_the_relative_and_combined_contribution_of_CTCF_and_CTCFL_to_genomic_regulation/12284852","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5051131946","display_name":"Mayilaadumveettil Nishana","orcid":"https://orcid.org/0000-0003-4480-4046","observed_orcids":["https://orcid.org/0000-0003-4480-4046"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mayilaadumveettil Nishana","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072348540","display_name":"Caryn J. Ha","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ha, Caryn","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112536506","display_name":"Javier Rodriguez-Hernaez","orcid":"https://orcid.org/0000-0001-5549-0463","observed_orcids":["https://orcid.org/0000-0001-5549-0463"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Rodriguez-Hernaez, Javier","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079904393","display_name":"Ali Ranjbaran","orcid":"https://orcid.org/0009-0007-1261-5407","observed_orcids":["https://orcid.org/0009-0007-1261-5407"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ranjbaran, Ali","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040070460","display_name":"Erica Chio","orcid":"https://orcid.org/0009-0002-9001-6892","observed_orcids":["https://orcid.org/0009-0002-9001-6892"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Chio, Erica","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070999017","display_name":"Elph\u00e8ge Pierre Nora","orcid":"https://orcid.org/0000-0002-8347-4396","observed_orcids":["https://orcid.org/0000-0002-8347-4396"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Elphege P. Nora","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072995500","display_name":"Sana Badri","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Badri, Sana B.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061181543","display_name":"Andreas Kloetgen","orcid":"https://orcid.org/0000-0003-0991-4442","observed_orcids":["https://orcid.org/0000-0003-0991-4442"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Kloetgen, Andreas","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002700487","display_name":"Benoit G. Bruneau","orcid":"https://orcid.org/0000-0002-0804-7597","observed_orcids":["https://orcid.org/0000-0002-0804-7597"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Benoit G. Bruneau","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051845185","display_name":"Aristotelis Tsirigos","orcid":"https://orcid.org/0000-0002-7512-8477","observed_orcids":["https://orcid.org/0000-0002-7512-8477"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tsirigos, Aristotelis","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5083464518","display_name":"Jane A. Skok","orcid":"https://orcid.org/0000-0002-4145-1516","observed_orcids":["https://orcid.org/0000-0002-4145-1516"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Skok, Jane A.","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-4145-1516","affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9901999831199646,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9901999831199646,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12820","display_name":"Chromatin Remodeling and Cancer","score":0.0010999999940395355,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.0006000000284984708,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ctcf","display_name":"CTCF","score":0.996999979019165},{"id":"https://openalex.org/keywords/ctcfl","display_name":"CTCFL","score":0.9829999804496765},{"id":"https://openalex.org/keywords/chromatin-looping","display_name":"chromatin looping","score":0.5619999766349792},{"id":"https://openalex.org/keywords/hi-c","display_name":"Hi-C","score":0.6629999876022339},{"id":"https://openalex.org/keywords/transgene-expression","display_name":"transgene expression","score":0.3199999928474426},{"id":"https://openalex.org/keywords/genome-regulation","display_name":"genome regulation","score":0.5170000195503235},{"id":"https://openalex.org/keywords/enhancer-promoter-interactions","display_name":"enhancer-promoter interactions","score":0.5669999718666077},{"id":"https://openalex.org/keywords/clc","display_name":"CLC","score":0.45899999141693115}],"concepts":[{"id":"https://openalex.org/C2778760011","wikidata":"https://www.wikidata.org/wiki/Q21163346","display_name":"CTCF","level":5,"score":0.785624623298645},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5201683044433594},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.49060192704200745},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.34227779507637024},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2729305028915405},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.06751865148544312},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C111936080","wikidata":"https://www.wikidata.org/wiki/Q913367","display_name":"Enhancer","level":4,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"pmh:oai:figshare.com:article/12284852","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/Additional_file_3_of_Defining_the_relative_and_combined_contribution_of_CTCF_and_CTCFL_to_genomic_regulation/12284852","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.12284852","doi":"https://doi.org/10.6084/m9.figshare.12284852","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.12284852","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.12284852.v1","doi":"https://doi.org/10.6084/m9.figshare.12284852.v1","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.12284852.v1","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"pmh:oai:figshare.com:article/12284852","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/Additional_file_3_of_Defining_the_relative_and_combined_contribution_of_CTCF_and_CTCFL_to_genomic_regulation/12284852","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W6939601372","https://openalex.org/W6901986888","https://openalex.org/W6939133914","https://openalex.org/W3026337771","https://openalex.org/W1968630368","https://openalex.org/W2992166152","https://openalex.org/W3047829377","https://openalex.org/W4285394295","https://openalex.org/W6925596825","https://openalex.org/W3092434752"],"abstract_inverted_index":{"Table":[0],"S2.":[1],"HiC-bench":[2],"filter":[3,6],"stats.":[4],"The":[5],"stats":[7],"of":[8,20],"HiC":[9],"experiments":[10],"using":[11],"all":[12],"transgenes":[13],"(CTCF,":[14],"CTCFL,":[15],"CLC,":[16],"LCL)":[17],"under":[18],"conditions":[19],"U,":[21],"I,":[22],"D":[23],"and":[24],"ID.":[25]},"counts_by_year":[],"updated_date":"2026-10-08T09:06:37.294493","created_date":"2024-04-08T00:00:00"}
