{"id":"https://openalex.org/W4394439664","doi":"https://doi.org/10.6084/m9.figshare.c.3643949_d10","title":"Additional file 7: of Relationships between putative G-quadruplex-forming sequences, RecQ helicases, and transcription","display_name":"Additional file 7: of Relationships between putative G-quadruplex-forming sequences, RecQ helicases, and transcription","publication_year":2015,"publication_date":"2015-01-01","ids":{"openalex":"https://openalex.org/W4394439664","doi":"https://doi.org/10.6084/m9.figshare.c.3643949_d10"},"language":"en","primary_location":{"id":"pmh:oai:figshare.com:article/4467263","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_7_of_Relationships_between_putative_G-quadruplex-forming_sequences_RecQ_helicases_and_transcription/4467263","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"volume":null,"type":"dataset","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://figshare.com/articles/dataset/Additional_file_7_of_Relationships_between_putative_G-quadruplex-forming_sequences_RecQ_helicases_and_transcription/4467263","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043158428","display_name":"John A. Smestad","orcid":"https://orcid.org/0000-0001-7922-3319","observed_orcids":["https://orcid.org/0000-0001-7922-3319"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Smestad, John","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5046386274","display_name":"Louis James Maher III","orcid":"https://orcid.org/0000-0002-5043-6422","observed_orcids":["https://orcid.org/0000-0002-5043-6422"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"L. Maher","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10432","display_name":"DNA and Nucleic Acid Chemistry","score":0.7548999786376953,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10432","display_name":"DNA and Nucleic Acid Chemistry","score":0.7548999786376953,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.2029999941587448,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.006500000134110451,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/g-quadruplex-forming-sequences","display_name":"G-quadruplex-forming sequences","score":0.9490000009536743},{"id":"https://openalex.org/keywords/recq-helicase","display_name":"RecQ helicase","score":0.9980000257492065},{"id":"https://openalex.org/keywords/transcription","display_name":"transcription","score":0.7260000109672546},{"id":"https://openalex.org/keywords/gencode-annotation","display_name":"GENCODE annotation","score":0.765999972820282}],"concepts":[{"id":"https://openalex.org/C161223559","wikidata":"https://www.wikidata.org/wiki/Q138864","display_name":"Helicase","level":4,"score":0.7496154308319092},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.600732684135437},{"id":"https://openalex.org/C179926584","wikidata":"https://www.wikidata.org/wiki/Q207714","display_name":"Transcription (linguistics)","level":2,"score":0.5649124979972839},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5412452220916748},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.43574395775794983},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2582452595233917},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.093232661485672},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"pmh:oai:figshare.com:article/4467263","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_7_of_Relationships_between_putative_G-quadruplex-forming_sequences_RecQ_helicases_and_transcription/4467263","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.c.3643949_d10","doi":"https://doi.org/10.6084/m9.figshare.c.3643949_d10","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.c.3643949_d10","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.c.3643949_d10.v1","doi":"https://doi.org/10.6084/m9.figshare.c.3643949_d10.v1","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.c.3643949_d10.v1","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"pmh:oai:figshare.com:article/4467263","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_7_of_Relationships_between_putative_G-quadruplex-forming_sequences_RecQ_helicases_and_transcription/4467263","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"sustainable_development_goals":[],"sustainable_development_goals_aurora":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4394518530","https://openalex.org/W4394194546","https://openalex.org/W4394528888","https://openalex.org/W2949993615","https://openalex.org/W1996507133","https://openalex.org/W7027959995","https://openalex.org/W2142466737","https://openalex.org/W4293224656","https://openalex.org/W4311134090","https://openalex.org/W2978247079"],"abstract_inverted_index":{"R":[0,16],"code":[1],"for":[2,6,58],"CAGE":[3,19],"data":[4,20],"processing":[5],"epigenetic":[7],"modeling":[8],"of":[9,27,40,47],"gene":[10,60],"expression":[11,46],"method.":[12],"Program":[13],"written":[14],"in":[15,21],"that":[17],"takes":[18],".gtf":[22],"format":[23],"and":[24,55],"the":[25,62],"output":[26],"Additional":[28,41],"file":[29,42],"6":[30],"as":[31],"input,":[32],"merges":[33],"rows":[34],"with":[35,61],"GENCODE":[36],"annotation":[37],"table":[38],"(output":[39],"6),":[43],"calculates":[44],"aggregate":[45],"all":[48],"transcripts":[49],"originating":[50],"from":[51],"a":[52],"given":[53],"TSS,":[54],"identifies":[56],"TSS":[57],"each":[59],"highest":[63],"expression.":[64],"(R":[65],"4":[66],"kb)":[67]},"counts_by_year":[],"updated_date":"2026-10-08T09:06:37.294493","created_date":"2024-04-08T00:00:00"}