{"id":"https://openalex.org/W4394412966","doi":"https://doi.org/10.6084/m9.figshare.c.3603542_d6","title":"Additional file 1: of Genome-wide profiling of 24\u00c2 hr diel rhythmicity in the water flea, Daphnia pulex: network analysis reveals rhythmic gene expression and enhances functional gene annotation","display_name":"Additional file 1: of Genome-wide profiling of 24\u00c2 hr diel rhythmicity in the water flea, Daphnia pulex: network analysis reveals rhythmic gene expression and enhances functional gene annotation","publication_year":2016,"publication_date":"2016-01-01","ids":{"openalex":"https://openalex.org/W4394412966","doi":"https://doi.org/10.6084/m9.figshare.c.3603542_d6"},"language":"en","primary_location":{"id":"pmh:oai:figshare.com:article/4340204","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_1_of_Genome-wide_profiling_of_24_hr_diel_rhythmicity_in_the_water_flea_Daphnia_pulex_network_analysis_reveals_rhythmic_gene_expression_and_enhances_functional_gene_annotation/4340204","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"volume":null,"type":"dataset","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://figshare.com/articles/dataset/Additional_file_1_of_Genome-wide_profiling_of_24_hr_diel_rhythmicity_in_the_water_flea_Daphnia_pulex_network_analysis_reveals_rhythmic_gene_expression_and_enhances_functional_gene_annotation/4340204","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5041783702","display_name":"Samuel S. C. Rund","orcid":"https://orcid.org/0000-0002-1701-7787","observed_orcids":["https://orcid.org/0000-0002-1701-7787"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Rund, Samuel","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112205865","display_name":"Boyoung Yoo","orcid":"https://orcid.org/0000-0001-7149-4616","observed_orcids":["https://orcid.org/0000-0001-7149-4616"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Boyoung Yoo","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112003996","display_name":"Camille Alam","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Alam, Camille","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017916044","display_name":"Taryn N. Green","orcid":"https://orcid.org/0000-0001-9527-5960","observed_orcids":["https://orcid.org/0000-0001-9527-5960"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Green, Taryn","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039417708","display_name":"Melissa Stephens","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Stephens, Melissa","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062079290","display_name":"Erliang Zeng","orcid":"https://orcid.org/0000-0002-2891-6497","observed_orcids":["https://orcid.org/0000-0002-2891-6497"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Erliang Zeng","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079680037","display_name":"Gary F. George","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"George, Gary","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028704024","display_name":"Aaron D. Sheppard","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sheppard, Aaron","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090190997","display_name":"Giles E. Duffield","orcid":"https://orcid.org/0000-0003-1373-7805","observed_orcids":["https://orcid.org/0000-0003-1373-7805"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Duffield, Giles","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5095019753","display_name":"Tijana Milenkovi\u0107","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Milenkovi\u00c4\u0087, Tijana","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5006579295","display_name":"Michael E. Pfrender","orcid":"https://orcid.org/0000-0001-6861-0655","observed_orcids":["https://orcid.org/0000-0001-6861-0655"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Pfrender, Michael","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10342","display_name":"Circadian rhythm and melatonin","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/2807","display_name":"Endocrine and Autonomic Systems"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10342","display_name":"Circadian rhythm and melatonin","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/2807","display_name":"Endocrine and Autonomic Systems"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/daphnia-pulex","display_name":"Daphnia pulex","score":0.9919999837875366},{"id":"https://openalex.org/keywords/circadian-rhythm","display_name":"circadian rhythm","score":0.7749999761581421},{"id":"https://openalex.org/keywords/rhythmic-gene-expression","display_name":"rhythmic gene expression","score":0.9580000042915344},{"id":"https://openalex.org/keywords/gene-regulatory-networks","display_name":"gene regulatory networks","score":0.703000009059906},{"id":"https://openalex.org/keywords/functional-gene-annotation","display_name":"functional gene annotation","score":0.8220000267028809},{"id":"https://openalex.org/keywords/genome-wide-characterization","display_name":"genome-wide characterization","score":0.597000002861023}],"concepts":[{"id":"https://openalex.org/C2779765374","wikidata":"https://www.wikidata.org/wiki/Q1080188","display_name":"Daphnia pulex","level":4,"score":0.958886981010437},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7783804535865784},{"id":"https://openalex.org/C153102810","wikidata":"https://www.wikidata.org/wiki/Q1788240","display_name":"Diel vertical migration","level":2,"score":0.7603025436401367},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5871062278747559},{"id":"https://openalex.org/C18431079","wikidata":"https://www.wikidata.org/wiki/Q1502169","display_name":"Gene expression profiling","level":4,"score":0.5415916442871094},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5241760611534119},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5215906500816345},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.4668479859828949},{"id":"https://openalex.org/C2778919138","wikidata":"https://www.wikidata.org/wiki/Q2120770","display_name":"Pulex","level":4,"score":0.4397626221179962},{"id":"https://openalex.org/C2780187675","wikidata":"https://www.wikidata.org/wiki/Q269354","display_name":"Daphnia","level":3,"score":0.4206976890563965},{"id":"https://openalex.org/C135343436","wikidata":"https://www.wikidata.org/wiki/Q170406","display_name":"Rhythm","level":2,"score":0.41032496094703674},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3494967520236969},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.137813001871109},{"id":"https://openalex.org/C107038049","wikidata":"https://www.wikidata.org/wiki/Q35986","display_name":"Aesthetics","level":1,"score":0.0},{"id":"https://openalex.org/C84766238","wikidata":"https://www.wikidata.org/wiki/Q25364","display_name":"Crustacean","level":2,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"pmh:oai:figshare.com:article/4340204","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_1_of_Genome-wide_profiling_of_24_hr_diel_rhythmicity_in_the_water_flea_Daphnia_pulex_network_analysis_reveals_rhythmic_gene_expression_and_enhances_functional_gene_annotation/4340204","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.c.3603542_d6","doi":"https://doi.org/10.6084/m9.figshare.c.3603542_d6","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.c.3603542_d6","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.c.3603542_d6.v1","doi":"https://doi.org/10.6084/m9.figshare.c.3603542_d6.v1","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.c.3603542_d6.v1","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"pmh:oai:figshare.com:article/4340204","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_1_of_Genome-wide_profiling_of_24_hr_diel_rhythmicity_in_the_water_flea_Daphnia_pulex_network_analysis_reveals_rhythmic_gene_expression_and_enhances_functional_gene_annotation/4340204","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W7138176945","https://openalex.org/W6958638857","https://openalex.org/W6902434764","https://openalex.org/W2507714297","https://openalex.org/W2362721637","https://openalex.org/W2070630127","https://openalex.org/W7095628124","https://openalex.org/W7095583083","https://openalex.org/W7223253590","https://openalex.org/W2029736944"],"abstract_inverted_index":{"JTK_CYCLE":[0,17],"and":[1,26,28,35],"network":[2,21,30],"analysis":[3,22,31],"results.":[4],"The":[5],"spreadsheet":[6],"shows,":[7],"for":[8],"each":[9],"D.":[10],"pulex":[11],"gene:":[12],"1)":[13],"Gene":[14],"annotations":[15],"2)":[16],"derived":[18],"statistics,":[19,27],"3)":[20],"rhythmic":[23],"gene":[24],"predictions":[25],"4)":[29],"functional":[32],"annotations,":[33],"predictions,":[34],"statistics.":[36],"(XLSX":[37],"1853\u00c2":[38],"kb)":[39]},"counts_by_year":[],"updated_date":"2026-10-30T12:39:25.321706","created_date":"2024-04-08T00:00:00"}