{"id":"https://openalex.org/W4394297204","doi":"https://doi.org/10.6084/m9.figshare.17982179","title":"Additional file 2 of Complete chloroplast genomes of Rubus species (Rosaceae) and comparative analysis within the genus","display_name":"Additional file 2 of Complete chloroplast genomes of Rubus species (Rosaceae) and comparative analysis within the genus","publication_year":2022,"publication_date":"2022-01-01","ids":{"openalex":"https://openalex.org/W4394297204","doi":"https://doi.org/10.6084/m9.figshare.17982179"},"language":"en","primary_location":{"id":"pmh:oai:figshare.com:article/17982179","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_2_of_Complete_chloroplast_genomes_of_Rubus_species_Rosaceae_and_comparative_analysis_within_the_genus/17982179","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"parent_works":[],"lineage":["https://openalex.org/W4394297204"],"child_works_count":0,"type":"dataset","is_traditional":false,"indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://figshare.com/articles/dataset/Additional_file_2_of_Complete_chloroplast_genomes_of_Rubus_species_Rosaceae_and_comparative_analysis_within_the_genus/17982179","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5070254522","display_name":"Jiaojun Yu","orcid":"https://orcid.org/0000-0001-9400-5408","observed_orcids":["https://orcid.org/0000-0001-9400-5408"]},"institutions":[{"id":"https://openalex.org/I10011244","display_name":"Huanggang Normal University","ror":"https://ror.org/007gf6e19","country_code":"CN","type":"education","lineage":["https://openalex.org/I10011244"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yu, Jiaojun","raw_affiliation_strings":["Huanggang Normal University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Huanggang Normal University","institution_ids":["https://openalex.org/I10011244"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006986483","display_name":"Jun Fan Fu","orcid":"https://orcid.org/0000-0001-9444-8639","observed_orcids":["https://orcid.org/0000-0001-9444-8639"]},"institutions":[{"id":"https://openalex.org/I10011244","display_name":"Huanggang Normal University","ror":"https://ror.org/007gf6e19","country_code":"CN","type":"education","lineage":["https://openalex.org/I10011244"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fu, Jun","raw_affiliation_strings":["Huanggang Normal University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Huanggang Normal University","institution_ids":["https://openalex.org/I10011244"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067032674","display_name":"Yuanping Fang","orcid":"https://orcid.org/0009-0004-0672-6651","observed_orcids":["https://orcid.org/0009-0004-0672-6651"]},"institutions":[{"id":"https://openalex.org/I10011244","display_name":"Huanggang Normal University","ror":"https://ror.org/007gf6e19","country_code":"CN","type":"education","lineage":["https://openalex.org/I10011244"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fang, Yuanping","raw_affiliation_strings":["Huanggang Normal University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Huanggang Normal University","institution_ids":["https://openalex.org/I10011244"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100638997","display_name":"Jun Xiang","orcid":"https://orcid.org/0009-0003-8184-9822","observed_orcids":["https://orcid.org/0009-0003-8184-9822"]},"institutions":[{"id":"https://openalex.org/I10011244","display_name":"Huanggang Normal University","ror":"https://ror.org/007gf6e19","country_code":"CN","type":"education","lineage":["https://openalex.org/I10011244"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiang, Jun","raw_affiliation_strings":["Huanggang Normal University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Huanggang Normal University","institution_ids":["https://openalex.org/I10011244"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5073423601","display_name":"Hongjin Dong","orcid":"https://orcid.org/0000-0002-7098-9374","observed_orcids":["https://orcid.org/0000-0002-7098-9374"]},"institutions":[{"id":"https://openalex.org/I10011244","display_name":"Huanggang Normal University","ror":"https://ror.org/007gf6e19","country_code":"CN","type":"education","lineage":["https://openalex.org/I10011244"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Dong, Hongjin","raw_affiliation_strings":["Huanggang Normal University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Huanggang Normal University","institution_ids":["https://openalex.org/I10011244"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I10011244"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10385","display_name":"Plant Diversity and Evolution","score":0.9047999978065491,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10385","display_name":"Plant Diversity and Evolution","score":0.9047999978065491,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.03830000013113022,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13168","display_name":"Plant Ecology and Taxonomy Studies","score":0.029500000178813934,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/rubus","display_name":"Rubus","score":0.9470000267028809},{"id":"https://openalex.org/keywords/chloroplast-genome","display_name":"chloroplast genome","score":0.9660000205039978},{"id":"https://openalex.org/keywords/synonymous-substitution-rate","display_name":"synonymous substitution rate","score":0.8220000267028809},{"id":"https://openalex.org/keywords/nonsynonymous-substitution-rate","display_name":"nonsynonymous substitution rate","score":0.9990000128746033},{"id":"https://openalex.org/keywords/codon-usage-bias","display_name":"codon usage bias","score":0.656000018119812},{"id":"https://openalex.org/keywords/rosaceae","display_name":"Rosaceae","score":0.7749999761581421},{"id":"https://openalex.org/keywords/comparative-genomics","display_name":"comparative genomics","score":0.6899999976158142}],"concepts":[{"id":"https://openalex.org/C2777742739","wikidata":"https://www.wikidata.org/wiki/Q46299","display_name":"Rosaceae","level":2,"score":0.8663312196731567},{"id":"https://openalex.org/C2777220221","wikidata":"https://www.wikidata.org/wiki/Q602740","display_name":"Rubus","level":2,"score":0.8599419593811035},{"id":"https://openalex.org/C157369684","wikidata":"https://www.wikidata.org/wiki/Q34740","display_name":"Genus","level":2,"score":0.5954484343528748},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5685241222381592},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5077072381973267},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.35575634241104126},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.151811420917511},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"pmh:oai:figshare.com:article/17982179","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_2_of_Complete_chloroplast_genomes_of_Rubus_species_Rosaceae_and_comparative_analysis_within_the_genus/17982179","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.17982179","doi":"https://doi.org/10.6084/m9.figshare.17982179","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.17982179","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.17982179.v1","doi":"https://doi.org/10.6084/m9.figshare.17982179.v1","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.17982179.v1","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"pmh:oai:figshare.com:article/17982179","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_2_of_Complete_chloroplast_genomes_of_Rubus_species_Rosaceae_and_comparative_analysis_within_the_genus/17982179","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4394393618","https://openalex.org/W4394244479","https://openalex.org/W4394435807","https://openalex.org/W4206679897","https://openalex.org/W7221757776","https://openalex.org/W4400364605","https://openalex.org/W7167512320","https://openalex.org/W4407744608","https://openalex.org/W7138890611","https://openalex.org/W3199959156"],"abstract_inverted_index":{"Additional":[0],"file":[1],"2:":[2],"Table":[3],"S2.":[4],"Synonymous":[5],"(Ks)":[6],"and":[7],"nonsynonymous":[8],"(Ka)":[9],"analysis":[10],"of":[11],"the":[12,25],"eight":[13],"species":[14],"based":[15],"on":[16],"shared":[17],"unique":[18],"CDS":[19],"genes,":[20],"with":[21],"Rubus":[22],"tephrodes":[23],"as":[24],"reference.":[26]},"counts_by_year":[],"updated_date":"2026-10-08T09:06:37.294493","created_date":"2024-04-08T00:00:00"}
