{"id":"https://openalex.org/W4394220084","doi":"https://doi.org/10.6084/m9.figshare.7238801","title":"Additional file 9: of The DNMT1-associated lincRNA DACOR1 reprograms genome-wide DNA methylation in colon cancer","display_name":"Additional file 9: of The DNMT1-associated lincRNA DACOR1 reprograms genome-wide DNA methylation in colon cancer","publication_year":2018,"publication_date":"2018-01-01","ids":{"openalex":"https://openalex.org/W4394220084","doi":"https://doi.org/10.6084/m9.figshare.7238801"},"language":"en","primary_location":{"id":"pmh:oai:figshare.com:article/7238801","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_9_of_The_DNMT1-associated_lincRNA_DACOR1_reprograms_genome-wide_DNA_methylation_in_colon_cancer/7238801","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"volume":null,"type":"dataset","is_traditional":false,"indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://figshare.com/articles/dataset/Additional_file_9_of_The_DNMT1-associated_lincRNA_DACOR1_reprograms_genome-wide_DNA_methylation_in_colon_cancer/7238801","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5019325948","display_name":"Saigopal Somasundaram","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Saigopal Somasundaram","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111304703","display_name":"Megan E. Forrest","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Forrest, Megan","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088580963","display_name":"Helen Moinova","orcid":"https://orcid.org/0000-0001-5123-7671","observed_orcids":["https://orcid.org/0000-0001-5123-7671"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Moinova, Helen","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109260205","display_name":"Allison S. Cohen","orcid":"https://orcid.org/0009-0007-6160-6531","observed_orcids":["https://orcid.org/0009-0007-6160-6531"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Cohen, Allison","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005628876","display_name":"Vinay Varadan","orcid":"https://orcid.org/0000-0003-1520-1967","observed_orcids":["https://orcid.org/0000-0003-1520-1967"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Varadan, Vinay","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043924588","display_name":"Thomas LaFramboise","orcid":"https://orcid.org/0000-0003-1793-4777","observed_orcids":["https://orcid.org/0000-0003-1793-4777"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"LaFramboise, Thomas","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052550785","display_name":"Sanford D. Markowitz","orcid":"https://orcid.org/0000-0001-5369-5254","observed_orcids":["https://orcid.org/0000-0001-5369-5254"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Markowitz, Sanford","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5039458149","display_name":"Ahmad Mohammad Khalil","orcid":"https://orcid.org/0000-0002-1081-7300","observed_orcids":["https://orcid.org/0000-0002-1081-7300"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Khalil, Ahmad","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.7919999957084656,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.7919999957084656,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.20399999618530273,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.0005000000237487257,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/long-intergenic-noncoding-rna","display_name":"long intergenic non-coding RNA","score":0.925000011920929},{"id":"https://openalex.org/keywords/dnmt1","display_name":"DNMT1","score":0.9559999704360962},{"id":"https://openalex.org/keywords/dna-methylation","display_name":"DNA methylation","score":0.8989999890327454},{"id":"https://openalex.org/keywords/colon-cancer","display_name":"colon cancer","score":0.9610000252723694},{"id":"https://openalex.org/keywords/differentially-methylated-cpg-sites","display_name":"differentially methylated CpG sites","score":0.9070000052452087}],"concepts":[{"id":"https://openalex.org/C190727270","wikidata":"https://www.wikidata.org/wiki/Q874745","display_name":"DNA methylation","level":4,"score":0.6874369978904724},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5547382831573486},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5227418541908264},{"id":"https://openalex.org/C175211621","wikidata":"https://www.wikidata.org/wiki/Q14907998","display_name":"DNMT1","level":5,"score":0.5186138153076172},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.46761664748191833},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.44374778866767883},{"id":"https://openalex.org/C33288867","wikidata":"https://www.wikidata.org/wiki/Q518328","display_name":"Methylation","level":3,"score":0.43692585825920105},{"id":"https://openalex.org/C526805850","wikidata":"https://www.wikidata.org/wiki/Q188874","display_name":"Colorectal cancer","level":3,"score":0.4177369773387909},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4160793423652649},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.39634037017822266},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2376331388950348},{"id":"https://openalex.org/C91965660","wikidata":"https://www.wikidata.org/wiki/Q415875","display_name":"Methyltransferase","level":4,"score":0.22214296460151672},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.09201699495315552}],"mesh":[],"locations_count":3,"locations":[{"id":"pmh:oai:figshare.com:article/7238801","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_9_of_The_DNMT1-associated_lincRNA_DACOR1_reprograms_genome-wide_DNA_methylation_in_colon_cancer/7238801","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.7238801","doi":"https://doi.org/10.6084/m9.figshare.7238801","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.7238801","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.7238801.v1","doi":"https://doi.org/10.6084/m9.figshare.7238801.v1","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.7238801.v1","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"pmh:oai:figshare.com:article/7238801","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_9_of_The_DNMT1-associated_lincRNA_DACOR1_reprograms_genome-wide_DNA_methylation_in_colon_cancer/7238801","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"sustainable_development_goals":[{"score":0.8048999905586243,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4394256348","https://openalex.org/W4394242352","https://openalex.org/W4394547806","https://openalex.org/W2896367056","https://openalex.org/W1954748167","https://openalex.org/W3081959579","https://openalex.org/W2132984939","https://openalex.org/W1836451835","https://openalex.org/W2139296757","https://openalex.org/W4205629016"],"abstract_inverted_index":{"Dataset":[0],"6:":[1],"RRBS":[2,22],"assay":[3,23],"of":[4,25],"V852":[5],"Cells":[6],"with":[7],"DACOR":[8],"1":[9],"Re-expression":[10],"vs.":[11],"control":[12],"cells.":[13],"Complete":[14],"information":[15],"on":[16],"differentially":[17],"methylated":[18],"CpG":[19],"sites":[20],"from":[21],"output":[24],"read":[26,29],"values":[27],"and":[28],"depth.":[30],"(XLSX":[31],"2964":[32],"kb)":[33]},"counts_by_year":[],"updated_date":"2026-10-08T09:06:37.294493","created_date":"2024-04-08T00:00:00"}