{"id":"https://openalex.org/W4394154666","doi":"https://doi.org/10.6084/m9.figshare.5577370","title":"Supplementary Material for: Mapping Genomic Scaffolds to Chromosomes Using Laser Capture Microdissection in Application to Hawaiian Picture-Winged Drosophila","display_name":"Supplementary Material for: Mapping Genomic Scaffolds to Chromosomes Using Laser Capture Microdissection in Application to Hawaiian Picture-Winged Drosophila","publication_year":2017,"publication_date":"2017-01-01","ids":{"openalex":"https://openalex.org/W4394154666","doi":"https://doi.org/10.6084/m9.figshare.5577370"},"language":"en","primary_location":{"id":"pmh:oai:figshare.com:article/5577370","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/journal_contribution/Supplementary_Material_for_Mapping_Genomic_Scaffolds_to_Chromosomes_Using_Laser_Capture_Microdissection_in_Application_to_Hawaiian_Picture-Winged_Drosophila/5577370","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},"volume":null,"type":"supplementary-materials","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://figshare.com/articles/journal_contribution/Supplementary_Material_for_Mapping_Genomic_Scaffolds_to_Chromosomes_Using_Laser_Capture_Microdissection_in_Application_to_Hawaiian_Picture-Winged_Drosophila/5577370","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5023857538","display_name":"Lin Kang","orcid":"https://orcid.org/0000-0002-9186-9574","observed_orcids":["https://orcid.org/0000-0002-9186-9574"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Kang, L.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073020803","display_name":"Phillip George","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"George, P.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076727421","display_name":"Donald K. Price","orcid":"https://orcid.org/0000-0003-2501-8373","observed_orcids":["https://orcid.org/0000-0003-2501-8373"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Price, D.K.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048174967","display_name":"Igor V. Sharakhov","orcid":"https://orcid.org/0000-0003-0752-3747","observed_orcids":["https://orcid.org/0000-0003-0752-3747"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sharakhov, I.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5064169407","display_name":"Pawel Michalak","orcid":"https://orcid.org/0000-0003-4890-8985","observed_orcids":["https://orcid.org/0000-0003-4890-8985"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Michalak, P.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.8637999892234802,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.8637999892234802,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.09189999848604202,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11077","display_name":"Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities","score":0.010300000198185444,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/laser-capture-microdissection","display_name":"laser capture microdissection","score":0.9850000143051147},{"id":"https://openalex.org/keywords/de-novo-genome-assembly","display_name":"de novo genome assembly","score":0.8640000224113464},{"id":"https://openalex.org/keywords/chromosome-arms","display_name":"chromosome arms","score":0.8270000219345093},{"id":"https://openalex.org/keywords/sex-chromosome-evolution","display_name":"sex chromosome evolution","score":0.703000009059906}],"concepts":[{"id":"https://openalex.org/C125965507","wikidata":"https://www.wikidata.org/wiki/Q1516595","display_name":"Laser capture microdissection","level":4,"score":0.829849362373352},{"id":"https://openalex.org/C2776041557","wikidata":"https://www.wikidata.org/wiki/Q3715451","display_name":"Drosophila (subgenus)","level":3,"score":0.6576180458068848},{"id":"https://openalex.org/C11242284","wikidata":"https://www.wikidata.org/wiki/Q4293202","display_name":"Microdissection","level":3,"score":0.494340181350708},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.455890953540802},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.44766002893447876},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.28254711627960205},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1385664939880371},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"pmh:oai:figshare.com:article/5577370","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/journal_contribution/Supplementary_Material_for_Mapping_Genomic_Scaffolds_to_Chromosomes_Using_Laser_Capture_Microdissection_in_Application_to_Hawaiian_Picture-Winged_Drosophila/5577370","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"doi:10.6084/m9.figshare.5577370","doi":"https://doi.org/10.6084/m9.figshare.5577370","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.5577370","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.5577370.v1","doi":"https://doi.org/10.6084/m9.figshare.5577370.v1","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.5577370.v1","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"pmh:oai:figshare.com:article/5577370","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/journal_contribution/Supplementary_Material_for_Mapping_Genomic_Scaffolds_to_Chromosomes_Using_Laser_Capture_Microdissection_in_Application_to_Hawaiian_Picture-Winged_Drosophila/5577370","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2767526376","https://openalex.org/W2051829400","https://openalex.org/W297633788","https://openalex.org/W6976394918","https://openalex.org/W1906470927","https://openalex.org/W4402852692","https://openalex.org/W2903541438","https://openalex.org/W2118970626","https://openalex.org/W2135589046","https://openalex.org/W2994280296"],"abstract_inverted_index":{"Next-generation":[0],"sequencing":[1,23],"technologies":[2],"have":[3,25],"led":[4],"to":[5,29,34,47,58,88,113,133,162],"a":[6,50,70,144],"decreased":[7],"cost":[8],"and":[9,56,78,96],"an":[10],"increased":[11],"throughput":[12],"in":[13,90,172],"genome":[14,18,85,155],"sequencing.":[15],"Yet,":[16],"many":[17],"assemblies":[19,86],"based":[20],"on":[21],"short":[22],"reads":[24,109],"been":[26],"assembled":[27,116],"only":[28],"the":[30,35,108,114,128,138,146,164,169],"scaffold":[31],"level":[32],"due":[33],"lack":[36],"of":[37,44,53,82,103,110,127],"sufficient":[38],"chromosome":[39,99,112,134,148],"mapping":[40,45,80,107],"information.":[41],"Traditional":[42],"ways":[43],"scaffolds":[46,81,117,129,139],"chromosomes":[48,89],"require":[49],"large":[51],"amount":[52],"laboratory":[54],"work":[55],"time":[57,171],"generate":[59],"genetic":[60],"and/or":[61],"physical":[62],"maps.":[63],"To":[64],"address":[65],"this":[66,159],"problem,":[67],"we":[68],"conducted":[69],"rapid":[71],"technique":[72],"which":[73],"uses":[74],"laser":[75],"capture":[76],"microdissection":[77],"enables":[79],"de":[83],"novo":[84],"directly":[87],"Hawaiian":[91,120,174],"picture-winged":[92,121,175],"Drosophila.":[93],"We":[94,157],"isolated":[95],"sequenced":[97],"intact":[98],"arms":[100],"from":[101,118],"larvae":[102],"D.":[104],"differens.":[105],"By":[106],"each":[111],"recently":[115],"3":[119],"Drosophila":[122,176],"species,":[123],"at":[124],"least":[125],"67%":[126],"were":[130],"successfully":[131],"assigned":[132],"arms.":[135],"Even":[136],"though":[137],"are":[140],"not":[141],"ordered":[142],"within":[143],"chromosome,":[145],"fast-generated":[147],"information":[149,161],"allows":[150],"for":[151,168],"chromosome-related":[152],"analyses":[153],"after":[154],"assembling.":[156],"utilize":[158],"new":[160],"test":[163],"faster-X":[165],"evolution":[166],"effect":[167],"first":[170],"these":[173],"species.":[177]},"counts_by_year":[],"updated_date":"2026-10-08T09:06:37.294493","created_date":"2024-04-08T00:00:00"}