{"id":"https://openalex.org/W4394123781","doi":"https://doi.org/10.6084/m9.figshare.14285901","title":"Virulence genotyping and antimicrobial resistance profiles of Yersinia enterocolitica isolated from meat and meat products in Egypt","display_name":"Virulence genotyping and antimicrobial resistance profiles of Yersinia enterocolitica isolated from meat and meat products in Egypt","publication_year":2021,"publication_date":"2021-01-01","ids":{"openalex":"https://openalex.org/W4394123781","doi":"https://doi.org/10.6084/m9.figshare.14285901"},"language":"en","primary_location":{"id":"pmh:oai:figshare.com:article/14285901","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Virulence_genotyping_and_antimicrobial_resistance_profiles_of_Yersinia_enterocolitica_isolated_from_meat_and_meat_products_in_Egypt/14285901","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"parent_works":[],"lineage":["https://openalex.org/W4394123781"],"child_works_count":0,"type":"dataset","is_traditional":false,"indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://figshare.com/articles/dataset/Virulence_genotyping_and_antimicrobial_resistance_profiles_of_Yersinia_enterocolitica_isolated_from_meat_and_meat_products_in_Egypt/14285901","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5091097690","display_name":"Gamal Younis","orcid":"https://orcid.org/0000-0002-3061-4076","observed_orcids":["https://orcid.org/0000-0002-3061-4076"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"G. A. Younis","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061809334","display_name":"Rasha Elkenany","orcid":"https://orcid.org/0000-0003-3171-9969","observed_orcids":["https://orcid.org/0000-0003-3171-9969"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"R. M. Elkenany","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5013869855","display_name":"Heba A. Dowidar","orcid":"https://orcid.org/0000-0003-2711-2523","observed_orcids":["https://orcid.org/0000-0003-2711-2523"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"H. A. Dowidar","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12232","display_name":"Yersinia bacterium, plague, ectoparasites research","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12232","display_name":"Yersinia bacterium, plague, ectoparasites research","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10486","display_name":"Salmonella and Campylobacter epidemiology","score":0.0015999999595806003,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10147","display_name":"Antibiotic Resistance in Bacteria","score":0.0005000000237487257,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/yersinia-enterocolitica","display_name":"Yersinia enterocolitica","score":1.0},{"id":"https://openalex.org/keywords/virulence-genes","display_name":"virulence genes","score":0.8230000138282776},{"id":"https://openalex.org/keywords/antimicrobial-resistance","display_name":"antimicrobial resistance","score":0.9990000128746033},{"id":"https://openalex.org/keywords/multidrug-resistance","display_name":"multidrug resistance","score":0.9319999814033508},{"id":"https://openalex.org/keywords/meat-products","display_name":"meat products","score":0.7929999828338623},{"id":"https://openalex.org/keywords/chicken-meat","display_name":"chicken meat","score":0.8069999814033508},{"id":"https://openalex.org/keywords/inv-gene","display_name":"inv gene","score":0.7900000214576721},{"id":"https://openalex.org/keywords/ail-gene","display_name":"ail gene","score":0.7889999747276306},{"id":"https://openalex.org/keywords/16s-rrna-phylogeny","display_name":"16S rRNA phylogeny","score":0.9210000038146973},{"id":"https://openalex.org/keywords/foodborne-pathogens","display_name":"foodborne pathogens","score":0.7599999904632568},{"id":"https://openalex.org/keywords/egypt","display_name":"Egypt","score":0.6240000128746033}],"concepts":[{"id":"https://openalex.org/C2776234502","wikidata":"https://www.wikidata.org/wiki/Q135177","display_name":"Yersinia enterocolitica","level":3,"score":0.9603663086891174},{"id":"https://openalex.org/C60987743","wikidata":"https://www.wikidata.org/wiki/Q1460232","display_name":"Virulence","level":3,"score":0.7216451168060303},{"id":"https://openalex.org/C31467283","wikidata":"https://www.wikidata.org/wiki/Q912147","display_name":"Genotyping","level":4,"score":0.7040581703186035},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.6299246549606323},{"id":"https://openalex.org/C94665300","wikidata":"https://www.wikidata.org/wiki/Q63391344","display_name":"Antibiotic resistance","level":3,"score":0.5529831647872925},{"id":"https://openalex.org/C4937899","wikidata":"https://www.wikidata.org/wiki/Q68541106","display_name":"Antimicrobial","level":2,"score":0.5404587388038635},{"id":"https://openalex.org/C2776255393","wikidata":"https://www.wikidata.org/wiki/Q132231","display_name":"Yersinia","level":3,"score":0.4654477536678314},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4178429841995239},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.2653350830078125},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.16869184374809265},{"id":"https://openalex.org/C501593827","wikidata":"https://www.wikidata.org/wiki/Q12187","display_name":"Antibiotics","level":2,"score":0.13397079706192017},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09817719459533691},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09747391939163208}],"mesh":[],"locations_count":3,"locations":[{"id":"pmh:oai:figshare.com:article/14285901","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Virulence_genotyping_and_antimicrobial_resistance_profiles_of_Yersinia_enterocolitica_isolated_from_meat_and_meat_products_in_Egypt/14285901","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.14285901","doi":"https://doi.org/10.6084/m9.figshare.14285901","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.14285901","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.14285901.v1","doi":"https://doi.org/10.6084/m9.figshare.14285901.v1","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.14285901.v1","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"pmh:oai:figshare.com:article/14285901","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Virulence_genotyping_and_antimicrobial_resistance_profiles_of_Yersinia_enterocolitica_isolated_from_meat_and_meat_products_in_Egypt/14285901","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"sustainable_development_goals":[{"score":0.9391000270843506,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"},{"score":0.6875,"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2963637823","https://openalex.org/W4366834315","https://openalex.org/W4298394272","https://openalex.org/W4308412367","https://openalex.org/W4409864036","https://openalex.org/W4403245501","https://openalex.org/W4295599235","https://openalex.org/W7122881599","https://openalex.org/W1483788658","https://openalex.org/W2806980506"],"abstract_inverted_index":{"Abstract":[0],"Pathogenic":[1],"Yersinia":[2],"enterocolitica":[3,34,61,84,185],"(Y.":[4],"enterocolitica)":[5],"is":[6],"one":[7],"of":[8,19,32,47,50,159,171,192],"the":[9,25,90,93,151,157,172,176,180,190],"food-borne":[10],"entero-pathogen":[11],"responsible":[12],"for":[13],"yersiniosis":[14],"in":[15,42,66,156,199,205],"humans.":[16],"The":[17],"purpose":[18],"this":[20],"research":[21],"was":[22,96,122,142,154],"to":[23,124,144],"survey":[24],"prevalence,":[26],"virulence-associated":[27],"genes,":[28],"and":[29,38,56,77,114,134,146,161,194,202],"antimicrobial":[30],"resistance":[31,120,153,164],"Y.":[33,60,83,184,197],"isolated":[35],"from":[36],"meat":[37,39,68,201,203],"product":[40],"samples":[41,49],"Egypt.":[43,206],"Forty-one":[44],"(5.9%)":[45],"out":[46],"700-":[48],"chicken":[51,67],"meat,":[52],"beef,":[53,55],"ground":[54],"sausage":[57],"were":[58,79],"positive":[59],"with":[62,86,98],"a":[63,99,138],"high":[64,100,119,139],"prevalence":[65],"(12%).":[69],"Five":[70],"virulence":[71],"genes":[72],"(ail,":[73],"inv,":[74],"ystA,":[75],"ystB,":[76],"yadA)":[78],"characterized":[80],"among":[81],"41":[82],"isolates":[85],"variable":[87],"frequencies.":[88],"Among":[89],"strains":[91,160],"tested,":[92],"ystB":[94],"gene":[95,106,109,112,116],"detected":[97],"percentage":[101],"(78.1%),":[102],"followed":[103,128],"by":[104,129],"inv":[105],"(70.7%),":[107],"ail":[108],"(14.6%),":[110],"ystA":[111],"(12.2%),":[113],"yadA":[115],"(2.4%).":[117],"A":[118],"rate":[121,141],"estimated":[123],"amoxicillin-clavulanic":[125],"acid":[126],"(100%),":[127],"cefazolin":[130],"(95%),":[131],"ampicillin":[132],"(65.9%),":[133],"doxycycline":[135],"(51.2%),":[136],"whilst":[137],"sensitivity":[140],"observed":[143],"gentamicin":[145],"ciprofloxacin":[147],"(97.6%":[148],"each).":[149],"Interestingly,":[150],"multidrug":[152],"specified":[155],"70.7%":[158],"showing":[162],"13":[163],"patterns.":[165],"Based":[166],"on":[167],"nucleotide":[168],"sequence":[169],"analysis":[170],"16s":[173],"rRNA":[174],"gene,":[175],"phylogenetic":[177],"tree":[178],"showed":[179],"genetic":[181],"relatedness":[182],"amongst":[183],"isolates.":[186],"These":[187],"findings":[188],"highlighted":[189],"emergence":[191],"virulent":[193],"multidrug-resistant":[195],"pathogenic":[196],"entrocolitica":[198],"retailed":[200],"products":[204]},"counts_by_year":[],"updated_date":"2026-10-08T09:06:37.294493","created_date":"2024-04-08T00:00:00"}
