{"id":"https://openalex.org/W4394092697","doi":"https://doi.org/10.6084/m9.figshare.c.3617615_d4","title":"Additional file 5: of Integrating epigenomic data and 3D genomic structure with a new measure of chromatin assortativity","display_name":"Additional file 5: of Integrating epigenomic data and 3D genomic structure with a new measure of chromatin assortativity","publication_year":2016,"publication_date":"2016-01-01","ids":{"openalex":"https://openalex.org/W4394092697","doi":"https://doi.org/10.6084/m9.figshare.c.3617615_d4"},"language":"en","primary_location":{"id":"pmh:oai:figshare.com:article/4383176","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_5_of_Integrating_epigenomic_data_and_3D_genomic_structure_with_a_new_measure_of_chromatin_assortativity/4383176","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"volume":null,"type":"dataset","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://figshare.com/articles/dataset/Additional_file_5_of_Integrating_epigenomic_data_and_3D_genomic_structure_with_a_new_measure_of_chromatin_assortativity/4383176","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5059222814","display_name":"V\u00e9ra Pancaldi","orcid":"https://orcid.org/0000-0002-7433-624X","observed_orcids":["https://orcid.org/0000-0002-7433-624X"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Pancaldi, Vera","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001919002","display_name":"Enrique Carrillo de Santa Pau","orcid":"https://orcid.org/0000-0002-2310-2267","observed_orcids":["https://orcid.org/0000-0002-2310-2267"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Carrillo-De-Santa-Pau, Enrique","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011255219","display_name":"Biola M. Javierre","orcid":"https://orcid.org/0000-0002-8682-6748","observed_orcids":["https://orcid.org/0000-0002-8682-6748"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Biola Javierre","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065184997","display_name":"David Juan","orcid":"https://orcid.org/0000-0003-1912-9667","observed_orcids":["https://orcid.org/0000-0003-1912-9667"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Juan, David","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049273208","display_name":"Peter Fraser","orcid":"https://orcid.org/0000-0002-0041-1227","observed_orcids":["https://orcid.org/0000-0002-0041-1227"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Fraser, Peter","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074679629","display_name":"Mikhail Spivakov","orcid":"https://orcid.org/0000-0002-0383-3943","observed_orcids":["https://orcid.org/0000-0002-0383-3943"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Spivakov, Mikhail","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015217651","display_name":"Alfonso Valencia","orcid":"https://orcid.org/0000-0002-8937-6789","observed_orcids":["https://orcid.org/0000-0002-8937-6789"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Valencia, Alfonso","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5073806729","display_name":"Daniel Rico","orcid":"https://orcid.org/0000-0002-6561-2310","observed_orcids":["https://orcid.org/0000-0002-6561-2310"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Rico, Daniel","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9887999892234802,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9887999892234802,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.0020000000949949026,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12820","display_name":"Chromatin Remodeling and Cancer","score":0.000699999975040555,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/3d-genome-organization","display_name":"3D genome organization","score":0.7609999775886536},{"id":"https://openalex.org/keywords/hi-c","display_name":"Hi-C","score":0.7360000014305115},{"id":"https://openalex.org/keywords/epigenomic-data-integration","display_name":"epigenomic data integration","score":0.8019999861717224},{"id":"https://openalex.org/keywords/randomization","display_name":"randomization","score":0.7379999756813049},{"id":"https://openalex.org/keywords/chromatin-interactions","display_name":"chromatin interactions","score":0.47999998927116394}],"concepts":[{"id":"https://openalex.org/C121912465","wikidata":"https://www.wikidata.org/wiki/Q3589153","display_name":"Epigenomics","level":5,"score":0.7178596258163452},{"id":"https://openalex.org/C2780009758","wikidata":"https://www.wikidata.org/wiki/Q6804172","display_name":"Measure (data warehouse)","level":2,"score":0.674115002155304},{"id":"https://openalex.org/C83640560","wikidata":"https://www.wikidata.org/wiki/Q180951","display_name":"Chromatin","level":3,"score":0.5904593467712402},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4882514774799347},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.46812501549720764},{"id":"https://openalex.org/C89694873","wikidata":"https://www.wikidata.org/wiki/Q4810299","display_name":"Assortativity","level":3,"score":0.4337160587310791},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3092312812805176},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.22892728447914124},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2206091284751892},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.20069962739944458},{"id":"https://openalex.org/C190727270","wikidata":"https://www.wikidata.org/wiki/Q874745","display_name":"DNA methylation","level":4,"score":0.19551965594291687},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.1840423047542572},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.10802441835403442},{"id":"https://openalex.org/C34947359","wikidata":"https://www.wikidata.org/wiki/Q665189","display_name":"Complex network","level":2,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"pmh:oai:figshare.com:article/4383176","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_5_of_Integrating_epigenomic_data_and_3D_genomic_structure_with_a_new_measure_of_chromatin_assortativity/4383176","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.c.3617615_d4","doi":"https://doi.org/10.6084/m9.figshare.c.3617615_d4","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.c.3617615_d4","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.c.3617615_d4.v1","doi":"https://doi.org/10.6084/m9.figshare.c.3617615_d4.v1","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.c.3617615_d4.v1","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"pmh:oai:figshare.com:article/4383176","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Additional_file_5_of_Integrating_epigenomic_data_and_3D_genomic_structure_with_a_new_measure_of_chromatin_assortativity/4383176","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4394311250","https://openalex.org/W4394420898","https://openalex.org/W7136254069","https://openalex.org/W6941081695","https://openalex.org/W2731111365","https://openalex.org/W2950099363","https://openalex.org/W3011893069","https://openalex.org/W2965063612","https://openalex.org/W2137198307","https://openalex.org/W4392270230"],"abstract_inverted_index":{"A":[0],"tab-formatted":[1],"text":[2],"file":[3],"containing":[4],"the":[5,8,15],"results":[6],"of":[7],"PCHi-C":[9],"randomization":[10],"preserving":[11],"feature":[12],"distributions":[13],"along":[14],"chromosomes.":[16],"(TXT":[17],"74":[18],"kb)":[19]},"counts_by_year":[],"updated_date":"2026-10-08T09:06:37.294493","created_date":"2024-04-08T00:00:00"}