{"id":"https://openalex.org/W4394080262","doi":"https://doi.org/10.6084/m9.figshare.14247446","title":"Table S2. from Protein aggregation and the evolution of stress resistance in clinical yeast","display_name":"Table S2. from Protein aggregation and the evolution of stress resistance in clinical yeast","publication_year":2021,"publication_date":"2021-01-01","ids":{"openalex":"https://openalex.org/W4394080262","doi":"https://doi.org/10.6084/m9.figshare.14247446"},"language":"en","primary_location":{"id":"pmh:oai:figshare.com:article/14247446","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Table_S2_from_Protein_aggregation_and_the_evolution_of_stress_resistance_in_clinical_yeast/14247446","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"volume":null,"type":"dataset","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://figshare.com/articles/dataset/Table_S2_from_Protein_aggregation_and_the_evolution_of_stress_resistance_in_clinical_yeast/14247446","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065938447","display_name":"Yiwen R. Chen","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yiwen R. Chen","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088751975","display_name":"Inbal Ziv","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ziv, Inbal","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055160909","display_name":"Kavya Swaminathan","orcid":"https://orcid.org/0000-0001-7715-5375","observed_orcids":["https://orcid.org/0000-0001-7715-5375"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Swaminathan, Kavya","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0001-7715-5375","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005370974","display_name":"Joshua Eric Elias","orcid":"https://orcid.org/0000-0002-8063-3259","observed_orcids":["https://orcid.org/0000-0002-8063-3259"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Elias, Joshua E.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5066860900","display_name":"Daniel F. Jarosz","orcid":"https://orcid.org/0000-0003-3497-5888","observed_orcids":["https://orcid.org/0000-0003-3497-5888"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jarosz, Daniel F.","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0003-3497-5888","affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10676","display_name":"Genetics, Aging, and Longevity in Model Organisms","score":0.3215000033378601,"subfield":{"id":"https://openalex.org/subfields/1302","display_name":"Aging"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10676","display_name":"Genetics, Aging, and Longevity in Model Organisms","score":0.3215000033378601,"subfield":{"id":"https://openalex.org/subfields/1302","display_name":"Aging"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10934","display_name":"Heat shock proteins research","score":0.16110000014305115,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11335","display_name":"Prion Diseases and Protein Misfolding","score":0.11150000244379044,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/protein-aggregation","display_name":"protein aggregation","score":0.9559999704360962},{"id":"https://openalex.org/keywords/stress-granules","display_name":"stress granules","score":0.7979999780654907},{"id":"https://openalex.org/keywords/rna-binding-proteins","display_name":"RNA-binding proteins","score":0.41200000047683716},{"id":"https://openalex.org/keywords/ribosomal-proteins","display_name":"ribosomal proteins","score":0.6940000057220459},{"id":"https://openalex.org/keywords/protein-levels","display_name":"protein abundance","score":0.7329999804496765},{"id":"https://openalex.org/keywords/stress-tolerance","display_name":"stress tolerance","score":0.652999997138977},{"id":"https://openalex.org/keywords/proteomics","display_name":"proteomics","score":0.46700000762939453}],"concepts":[{"id":"https://openalex.org/C45235069","wikidata":"https://www.wikidata.org/wiki/Q278425","display_name":"Table (database)","level":2,"score":0.7795956134796143},{"id":"https://openalex.org/C2779222958","wikidata":"https://www.wikidata.org/wiki/Q45422","display_name":"Yeast","level":2,"score":0.6917194724082947},{"id":"https://openalex.org/C57473165","wikidata":"https://www.wikidata.org/wiki/Q7315604","display_name":"Resistance (ecology)","level":2,"score":0.46163296699523926},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.34449535608291626},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3390069603919983},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2153927981853485},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.12377181649208069},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.11697125434875488}],"mesh":[],"locations_count":3,"locations":[{"id":"pmh:oai:figshare.com:article/14247446","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Table_S2_from_Protein_aggregation_and_the_evolution_of_stress_resistance_in_clinical_yeast/14247446","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.14247446","doi":"https://doi.org/10.6084/m9.figshare.14247446","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.14247446","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},{"id":"doi:10.6084/m9.figshare.14247446.v1","doi":"https://doi.org/10.6084/m9.figshare.14247446.v1","is_oa":true,"landing_page_url":"https://doi.org/10.6084/m9.figshare.14247446.v1","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"pmh:oai:figshare.com:article/14247446","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Table_S2_from_Protein_aggregation_and_the_evolution_of_stress_resistance_in_clinical_yeast/14247446","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W6920867902","https://openalex.org/W6977029818","https://openalex.org/W4394426025","https://openalex.org/W3171803215","https://openalex.org/W3155564940","https://openalex.org/W1025137247","https://openalex.org/W2153494761","https://openalex.org/W2123229384","https://openalex.org/W2974951821","https://openalex.org/W1972376589"],"abstract_inverted_index":{"Protein":[0,21,49],"abundance":[1,22,86,121,157],"in":[2,11,24,31,36,47,60,69,79,107,117,122],"the":[3,98,103,160,172],"aggregate":[4,70,104],"fraction":[5,161,173],"of":[6,138],"[RNQ+][psi\u2212],":[7,41,73,128],"[rnq\u2212][psi\u2212],":[8],"and":[9,17,29,42,56,74,102,129,147],"[RNQ+][PSI+]":[10],"comparison":[12,52,95],"with":[13,152,167],"total":[14,99,142],"proteomic":[15],"data":[16],"stress":[18,54],"granule":[19,55],"proteome.":[20],"(measured":[23],"peptide":[25],"spectra":[26],"count":[27],"\u201cPSM\u201d":[28],"expressed":[30],"parts":[32,123],"per":[33,124,145],"million":[34,125],"\u201cppm\u201d)":[35],"isolated":[37],"aggregates":[38],"from":[39,71,87,111],"[RNQ+][PSI+],":[40,72,127],"[rnq\u2212][psi\u2212]":[43,75,130],"strains":[44,76,131],"are":[45],"tabulated":[46,59,78],"Total":[48],"sheet.":[50,64,82],"The":[51,65,83,120],"between":[53],"p-body":[57],"were":[58,77,109,132],"Stress":[61],"Granule":[62],"P-body":[63],"ribosomal":[66],"proteins":[67,140],"identified":[68],"Ribosomal":[80],"Proteins":[81],"known":[84],"yeast":[85],"unified":[88],"whole":[89],"proteome":[90,100],"quantification":[91],"was":[92,156,163,171,175],"listed":[93],"for":[94,126,159],"[17].":[96],"Both":[97],"dataset":[101],"isolation":[105],"described":[106],"here":[108],"obtained":[110],"cells":[112],"harvested":[113],"during":[114],"mid-exponential":[115],"phase":[116],"YPD":[118],"medium.":[119],"calculated":[133],"by":[134,141],"normalizing":[135],"spectral":[136,143],"counts":[137,144],"individual":[139],"samples":[146],"multiplying":[148],"one":[149],"million.":[150],"Columns":[151],"a":[153,168],"\u201cPSM-Sol\u201d":[154],"suffix":[155,170],"measures":[158],"that":[162,174],"SDS-soluble":[164],"whereas":[165],"columns":[166],"\u201cPSM-Res\u201d":[169],"SDS-resistant.":[176]},"counts_by_year":[],"updated_date":"2026-10-08T09:06:37.294493","created_date":"2024-04-08T00:00:00"}