{"id":"https://openalex.org/W4393828554","doi":"https://doi.org/10.5281/zenodo.1749271","title":"Common Kmers Data","display_name":"Common Kmers Data","publication_year":2018,"publication_date":"2018-11-30","ids":{"openalex":"https://openalex.org/W4393828554","doi":"https://doi.org/10.5281/zenodo.1749271"},"language":"en","primary_location":{"id":"pmh:oai:zenodo.org:1749272","doi":null,"is_oa":true,"landing_page_url":"https://zenodo.org/record/1749272","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"dataset"},"volume":null,"type":"dataset","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://zenodo.org/record/1749272","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5002668669","display_name":"David Koslicki","orcid":"https://orcid.org/0000-0002-0640-954X","observed_orcids":["https://orcid.org/0000-0002-0640-954X"]},"institutions":[{"id":"https://openalex.org/I131249849","display_name":"Oregon State University","ror":"https://ror.org/00ysfqy60","country_code":"US","type":"education","lineage":["https://openalex.org/I131249849"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Koslicki, David","raw_affiliation_strings":["Oregon State University"],"raw_orcid":"https://orcid.org/0000-0002-0640-954X","affiliations":[{"raw_affiliation_string":"Oregon State University","institution_ids":["https://openalex.org/I131249849"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5002668669"],"corresponding_institution_ids":["https://openalex.org/I131249849"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.961899995803833,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.961899995803833,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12640","display_name":"Environmental DNA in Biodiversity Studies","score":0.01269999984651804,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.008200000040233135,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/taxonomic-profiling","display_name":"taxonomic profiling","score":0.828000009059906},{"id":"https://openalex.org/keywords/metagenomics","display_name":"metagenomics","score":0.8180000185966492},{"id":"https://openalex.org/keywords/cami-challenge","display_name":"CAMI challenge","score":0.5490000247955322},{"id":"https://openalex.org/keywords/training-data","display_name":"training data","score":0.5659999847412109},{"id":"https://openalex.org/keywords/microbial-community-classification","display_name":"microbial community classification","score":0.3959999978542328},{"id":"https://openalex.org/keywords/opal","display_name":"opal","score":0.527999997138977}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3271964192390442}],"mesh":[],"locations_count":3,"locations":[{"id":"pmh:oai:zenodo.org:1749272","doi":null,"is_oa":true,"landing_page_url":"https://zenodo.org/record/1749272","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"dataset"},{"id":"doi:10.5281/zenodo.1749271","doi":"https://doi.org/10.5281/zenodo.1749271","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.1749271","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},{"id":"doi:10.5281/zenodo.1749272","doi":"https://doi.org/10.5281/zenodo.1749272","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.1749272","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"pmh:oai:zenodo.org:1749272","doi":null,"is_oa":true,"landing_page_url":"https://zenodo.org/record/1749272","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"dataset"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4393423140","https://openalex.org/W4393502897","https://openalex.org/W7118233840","https://openalex.org/W6968005219","https://openalex.org/W6910978670","https://openalex.org/W4393628426","https://openalex.org/W4394109270","https://openalex.org/W6977046450","https://openalex.org/W4393796983","https://openalex.org/W2282583203"],"abstract_inverted_index":{"Training":[0],"data":[1,28],"used":[2,10,31],"for":[3],"the":[4,12,33],"Common":[5],"Kmers/MetaPalette":[6],"taxonomic":[7],"profiling":[8],"method":[9],"in":[11,32],"CAMI":[13],"1":[14],"competition.":[15],"The":[16],"code":[17],"is":[18,29],"accessible":[19],"at":[20],"https://zenodo.org/record/1730624#.XAF303V96kA":[21],"via":[22],"https://doi.org/10.5281/zenodo.1730624":[23],"and":[24],"https://github.com/dkoslicki/MetaPalette/releases/tag/v1.0.0":[25],".":[26],"This":[27],"also":[30],"OPAL":[34],"paper:":[35],"https://doi.org/10.1101/372680":[36]},"counts_by_year":[],"updated_date":"2026-10-08T09:06:37.294493","created_date":"2024-04-03T00:00:00"}