{"id":"https://openalex.org/W4392183003","doi":"https://doi.org/10.3389/fmicb.2024.1332276","title":"Genome sequence diversity of SARS-CoV-2 in Serbia: insights gained from a 3-year pandemic study","display_name":"Genome sequence diversity of SARS-CoV-2 in Serbia: insights gained from a 3-year pandemic study","publication_year":2024,"publication_date":"2024-02-27","ids":{"openalex":"https://openalex.org/W4392183003","doi":"https://doi.org/10.3389/fmicb.2024.1332276","pmid":"https://pubmed.ncbi.nlm.nih.gov/38476954"},"language":"en","primary_location":{"id":"doi:10.3389/fmicb.2024.1332276","doi":"https://doi.org/10.3389/fmicb.2024.1332276","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fmicb.2024.1332276","pdf_url":"https://www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2024.1332276/pdf","source":{"id":"https://openalex.org/S2484704948","display_name":"Frontiers in Microbiology","issn_l":"1664-302X","issn":["1664-302X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","jufo-1","ki-jl-1","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Microbiology","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2024.1332276/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5032516293","display_name":"Mirjana Novkovi\u0107","orcid":"https://orcid.org/0000-0003-0788-9765","observed_orcids":["https://orcid.org/0000-0003-0788-9765"]},"institutions":[{"id":"https://openalex.org/I4068193","display_name":"University of Belgrade","ror":"https://ror.org/02qsmb048","country_code":"RS","type":"education","lineage":["https://openalex.org/I4068193"]},{"id":"https://openalex.org/I4391768169","display_name":"Institute of Molecular Genetics and Genetic Engineering","ror":"https://ror.org/026ynmk26","country_code":null,"type":"facility","lineage":["https://openalex.org/I4068193","https://openalex.org/I4391768169"]}],"countries":["RS"],"is_corresponding":true,"raw_author_name":"Mirjana Novkovic","raw_affiliation_strings":["Center for Genome Sequencing and Bioinformatics, Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade, Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Genome Sequencing and Bioinformatics, Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade, Serbia","institution_ids":["https://openalex.org/I4068193","https://openalex.org/I4391768169"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060237870","display_name":"Bojana Banovi\u0107 \u0110eri","orcid":"https://orcid.org/0000-0001-7663-1878","observed_orcids":["https://orcid.org/0000-0001-7663-1878"]},"institutions":[{"id":"https://openalex.org/I4068193","display_name":"University of Belgrade","ror":"https://ror.org/02qsmb048","country_code":"RS","type":"education","lineage":["https://openalex.org/I4068193"]},{"id":"https://openalex.org/I4391768169","display_name":"Institute of Molecular Genetics and Genetic Engineering","ror":"https://ror.org/026ynmk26","country_code":null,"type":"facility","lineage":["https://openalex.org/I4068193","https://openalex.org/I4391768169"]}],"countries":["RS"],"is_corresponding":true,"raw_author_name":"Bojana Banovic Djeri","raw_affiliation_strings":["Center for Genome Sequencing and Bioinformatics, Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade, Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Genome Sequencing and Bioinformatics, Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade, Serbia","institution_ids":["https://openalex.org/I4068193","https://openalex.org/I4391768169"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015875351","display_name":"Bojan Ristivojevi\u0107","orcid":"https://orcid.org/0000-0003-0600-7345","observed_orcids":["https://orcid.org/0000-0003-0600-7345"]},"institutions":[{"id":"https://openalex.org/I4068193","display_name":"University of Belgrade","ror":"https://ror.org/02qsmb048","country_code":"RS","type":"education","lineage":["https://openalex.org/I4068193"]},{"id":"https://openalex.org/I4391768169","display_name":"Institute of Molecular Genetics and Genetic Engineering","ror":"https://ror.org/026ynmk26","country_code":null,"type":"facility","lineage":["https://openalex.org/I4068193","https://openalex.org/I4391768169"]}],"countries":["RS"],"is_corresponding":false,"raw_author_name":"Bojan Ristivojevic","raw_affiliation_strings":["Center for Genome Sequencing and Bioinformatics, Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade, Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Genome Sequencing and Bioinformatics, Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade, Serbia","institution_ids":["https://openalex.org/I4068193","https://openalex.org/I4391768169"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007742094","display_name":"Aleksandra Kne\u017eevi\u0107","orcid":"https://orcid.org/0000-0003-3451-810X","observed_orcids":["https://orcid.org/0000-0003-3451-810X"]},"institutions":[{"id":"https://openalex.org/I4068193","display_name":"University of Belgrade","ror":"https://ror.org/02qsmb048","country_code":"RS","type":"education","lineage":["https://openalex.org/I4068193"]}],"countries":["RS"],"is_corresponding":false,"raw_author_name":"Aleksandra Knezevic","raw_affiliation_strings":["Institute of Microbiology and Immunology, Department of Virology, Faculty of Medicine, University of Belgrade, Belgrade, Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Microbiology and Immunology, Department of Virology, Faculty of Medicine, University of Belgrade, Belgrade, Serbia","institution_ids":["https://openalex.org/I4068193"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085190023","display_name":"Marko Jankovi\u0107","orcid":"https://orcid.org/0000-0001-5993-0577","observed_orcids":["https://orcid.org/0000-0001-5993-0577"]},"institutions":[{"id":"https://openalex.org/I4068193","display_name":"University of Belgrade","ror":"https://ror.org/02qsmb048","country_code":"RS","type":"education","lineage":["https://openalex.org/I4068193"]}],"countries":["RS"],"is_corresponding":false,"raw_author_name":"Marko Jankovic","raw_affiliation_strings":["Institute of Microbiology and Immunology, Department of Virology, Faculty of Medicine, University of Belgrade, Belgrade, Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Microbiology and Immunology, Department of Virology, Faculty of Medicine, University of Belgrade, Belgrade, Serbia","institution_ids":["https://openalex.org/I4068193"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017384219","display_name":"Vanja Tanasi\u0107","orcid":"https://orcid.org/0000-0002-1602-9938","observed_orcids":["https://orcid.org/0000-0002-1602-9938"]},"institutions":[{"id":"https://openalex.org/I4068193","display_name":"University of Belgrade","ror":"https://ror.org/02qsmb048","country_code":"RS","type":"education","lineage":["https://openalex.org/I4068193"]}],"countries":["RS"],"is_corresponding":false,"raw_author_name":"Vanja Tanasic","raw_affiliation_strings":["Center for Forensic and Applied Molecular Genetics, Faculty of Biology, University of Belgrade, Belgrade, Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Forensic and Applied Molecular Genetics, Faculty of Biology, University of Belgrade, Belgrade, Serbia","institution_ids":["https://openalex.org/I4068193"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082959828","display_name":"Verica Radojicic","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4068193","display_name":"University of Belgrade","ror":"https://ror.org/02qsmb048","country_code":"RS","type":"education","lineage":["https://openalex.org/I4068193"]}],"countries":["RS"],"is_corresponding":false,"raw_author_name":"Verica Radojicic","raw_affiliation_strings":["Center for Forensic and Applied Molecular Genetics, Faculty of Biology, University of Belgrade, Belgrade, Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Forensic and Applied Molecular Genetics, Faculty of Biology, University of Belgrade, Belgrade, Serbia","institution_ids":["https://openalex.org/I4068193"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051026369","display_name":"Du\u0161an Keckarevi\u0107","orcid":"https://orcid.org/0000-0003-2446-7177","observed_orcids":["https://orcid.org/0000-0003-2446-7177"]},"institutions":[{"id":"https://openalex.org/I4068193","display_name":"University of Belgrade","ror":"https://ror.org/02qsmb048","country_code":"RS","type":"education","lineage":["https://openalex.org/I4068193"]}],"countries":["RS"],"is_corresponding":false,"raw_author_name":"Dusan Keckarevic","raw_affiliation_strings":["Center for Forensic and Applied Molecular Genetics, Faculty of Biology, University of Belgrade, Belgrade, Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Forensic and Applied Molecular Genetics, Faculty of Biology, University of Belgrade, Belgrade, Serbia","institution_ids":["https://openalex.org/I4068193"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048285790","display_name":"Dejan Vidanovi\u0107","orcid":"https://orcid.org/0000-0003-0192-5120","observed_orcids":["https://orcid.org/0000-0003-0192-5120"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Dejan Vidanovic","raw_affiliation_strings":["Veterinary Specialized Institute \"Kraljevo\", Kraljevo, Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Veterinary Specialized Institute \"Kraljevo\", Kraljevo, Serbia","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059980311","display_name":"Bojana Te\u0161ovi\u0107","orcid":"https://orcid.org/0000-0003-1126-3036","observed_orcids":["https://orcid.org/0000-0003-1126-3036"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Bojana Tesovic","raw_affiliation_strings":["Veterinary Specialized Institute \"Kraljevo\", Kraljevo, Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Veterinary Specialized Institute \"Kraljevo\", Kraljevo, Serbia","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090356169","display_name":"Anita Skaki\u0107","orcid":"https://orcid.org/0000-0002-1213-4458","observed_orcids":["https://orcid.org/0000-0002-1213-4458"]},"institutions":[{"id":"https://openalex.org/I4068193","display_name":"University of Belgrade","ror":"https://ror.org/02qsmb048","country_code":"RS","type":"education","lineage":["https://openalex.org/I4068193"]},{"id":"https://openalex.org/I4391768169","display_name":"Institute of Molecular Genetics and Genetic Engineering","ror":"https://ror.org/026ynmk26","country_code":null,"type":"facility","lineage":["https://openalex.org/I4068193","https://openalex.org/I4391768169"]}],"countries":["RS"],"is_corresponding":false,"raw_author_name":"Anita Skakic","raw_affiliation_strings":["Center for Genome Sequencing and Bioinformatics, Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade, Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Genome Sequencing and Bioinformatics, Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade, Serbia","institution_ids":["https://openalex.org/I4068193","https://openalex.org/I4391768169"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090561198","display_name":"Maja Tolina\u010dki","orcid":"https://orcid.org/0000-0003-4620-4298","observed_orcids":["https://orcid.org/0000-0003-4620-4298"]},"institutions":[{"id":"https://openalex.org/I4068193","display_name":"University of Belgrade","ror":"https://ror.org/02qsmb048","country_code":"RS","type":"education","lineage":["https://openalex.org/I4068193"]},{"id":"https://openalex.org/I4391768169","display_name":"Institute of Molecular Genetics and Genetic Engineering","ror":"https://ror.org/026ynmk26","country_code":null,"type":"facility","lineage":["https://openalex.org/I4068193","https://openalex.org/I4391768169"]}],"countries":["RS"],"is_corresponding":false,"raw_author_name":"Maja Tolinacki","raw_affiliation_strings":["Center for Genome Sequencing and Bioinformatics, Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade, Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Genome Sequencing and Bioinformatics, Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade, Serbia","institution_ids":["https://openalex.org/I4068193","https://openalex.org/I4391768169"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085523086","display_name":"Ivana Mori\u0107","orcid":"https://orcid.org/0000-0001-6731-7115","observed_orcids":["https://orcid.org/0000-0001-6731-7115"]},"institutions":[{"id":"https://openalex.org/I4068193","display_name":"University of Belgrade","ror":"https://ror.org/02qsmb048","country_code":"RS","type":"education","lineage":["https://openalex.org/I4068193"]},{"id":"https://openalex.org/I4391768169","display_name":"Institute of Molecular Genetics and Genetic Engineering","ror":"https://ror.org/026ynmk26","country_code":null,"type":"facility","lineage":["https://openalex.org/I4068193","https://openalex.org/I4391768169"]}],"countries":["RS"],"is_corresponding":false,"raw_author_name":"Ivana Moric","raw_affiliation_strings":["Center for Genome Sequencing and Bioinformatics, Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade, Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Genome Sequencing and Bioinformatics, Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade, Serbia","institution_ids":["https://openalex.org/I4068193","https://openalex.org/I4391768169"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5103690575","display_name":"Valentina J. Djordjevic","orcid":"https://orcid.org/0000-0002-3554-2796","observed_orcids":["https://orcid.org/0000-0002-3554-2796"]},"institutions":[{"id":"https://openalex.org/I4068193","display_name":"University of Belgrade","ror":"https://ror.org/02qsmb048","country_code":"RS","type":"education","lineage":["https://openalex.org/I4068193"]},{"id":"https://openalex.org/I4391768169","display_name":"Institute of Molecular Genetics and Genetic Engineering","ror":"https://ror.org/026ynmk26","country_code":null,"type":"facility","lineage":["https://openalex.org/I4068193","https://openalex.org/I4391768169"]}],"countries":["RS"],"is_corresponding":false,"raw_author_name":"Valentina Djordjevic","raw_affiliation_strings":["Center for Genome Sequencing and Bioinformatics, Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade, Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Genome Sequencing and Bioinformatics, Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade, Serbia","institution_ids":["https://openalex.org/I4068193","https://openalex.org/I4391768169"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5032516293","https://openalex.org/A5060237870"],"corresponding_institution_ids":["https://openalex.org/I4068193","https://openalex.org/I4391768169"],"apc_list":{"value":3295,"currency":"USD","value_usd":3295},"apc_paid":{"value":3295,"currency":"USD","value_usd":3295},"fwci":1.2609,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.76990818,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":97,"max":98},"biblio":{"volume":"15","issue":null,"first_page":"1332276","last_page":"1332276"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10410","display_name":"COVID-19 epidemiological studies","score":0.000699999975040555,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10041","display_name":"COVID-19 Clinical Research Studies","score":0.00039999998989515007,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sars-cov-2","display_name":"SARS-CoV-2","score":0.9200000166893005},{"id":"https://openalex.org/keywords/covid-19","display_name":"COVID-19 pandemic","score":0.9300000071525574},{"id":"https://openalex.org/keywords/viral-genome-diversity","display_name":"viral genome diversity","score":0.5260000228881836},{"id":"https://openalex.org/keywords/sars-cov-2-variants-of-concern","display_name":"SARS-CoV-2 variants of concern","score":0.8629999756813049},{"id":"https://openalex.org/keywords/omicron-sublineages","display_name":"Omicron subvariants","score":0.8080000281333923},{"id":"https://openalex.org/keywords/kraken","display_name":"Kraken","score":0.43799999356269836},{"id":"https://openalex.org/keywords/alpha-variant","display_name":"Alpha variant","score":0.6899999976158142},{"id":"https://openalex.org/keywords/delta-variant","display_name":"Delta variant","score":0.996999979019165},{"id":"https://openalex.org/keywords/spike-protein-mutations","display_name":"spike protein mutations","score":0.6449999809265137},{"id":"https://openalex.org/keywords/d614g","display_name":"D614G","score":0.7480000257492065},{"id":"https://openalex.org/keywords/phylogenetic-analysis","display_name":"phylogenetic analysis","score":0.6430000066757202},{"id":"https://openalex.org/keywords/pandemic-waves","display_name":"pandemic waves","score":0.6299999952316284},{"id":"https://openalex.org/keywords/serbia","display_name":"Serbia","score":0.6399999856948853}],"concepts":[{"id":"https://openalex.org/C89623803","wikidata":"https://www.wikidata.org/wiki/Q12184","display_name":"Pandemic","level":5,"score":0.7943835258483887},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.5958372950553894},{"id":"https://openalex.org/C3007834351","wikidata":"https://www.wikidata.org/wiki/Q82069695","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","level":5,"score":0.502813994884491},{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.5018560886383057},{"id":"https://openalex.org/C2777648638","wikidata":"https://www.wikidata.org/wiki/Q57751738","display_name":"Coronavirus","level":5,"score":0.5002627372741699},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4824284017086029},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.47103598713874817},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.46090447902679443},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.4274723529815674},{"id":"https://openalex.org/C90132467","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetics","level":3,"score":0.4175027012825012},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.4133645296096802},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3993682265281677},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2384507954120636},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.1902405023574829},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.09950032830238342},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.07059380412101746},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.3389/fmicb.2024.1332276","doi":"https://doi.org/10.3389/fmicb.2024.1332276","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fmicb.2024.1332276","pdf_url":"https://www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2024.1332276/pdf","source":{"id":"https://openalex.org/S2484704948","display_name":"Frontiers in Microbiology","issn_l":"1664-302X","issn":["1664-302X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","jufo-1","ki-jl-1","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Microbiology","raw_type":"journal-article"},{"id":"pmid:38476954","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38476954","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in microbiology","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:10929721","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10929721","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10929721/pdf/fmicb-15-1332276.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Front Microbiol","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:111c3f00685647bcbab34edbb8f65d8e","doi":null,"is_oa":false,"landing_page_url":"https://doaj.org/article/111c3f00685647bcbab34edbb8f65d8e","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Microbiology, Vol 15 (2024)","raw_type":"article"},{"id":"pmh:oai:imagine.imgge.bg.ac.rs:123456789/2327","doi":null,"is_oa":true,"landing_page_url":"https://imagine.imgge.bg.ac.rs/handle/123456789/2327","pdf_url":null,"source":{"id":"https://openalex.org/S4377196579","display_name":"IMAGINE - Repository of the Institute of molecular genetics and genetic engineering (University of Belgrade)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4068193","host_organization_name":"University of Belgrade","host_organization_lineage":["https://openalex.org/I4068193"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Frontiers in Microbiology","raw_type":"article"}],"best_oa_location":{"id":"doi:10.3389/fmicb.2024.1332276","doi":"https://doi.org/10.3389/fmicb.2024.1332276","is_oa":true,"landing_page_url":"https://doi.org/10.3389/fmicb.2024.1332276","pdf_url":"https://www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2024.1332276/pdf","source":{"id":"https://openalex.org/S2484704948","display_name":"Frontiers in Microbiology","issn_l":"1664-302X","issn":["1664-302X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","jufo-1","ki-jl-1","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320527","host_organization_name":"Frontiers Media","host_organization_lineage":["https://openalex.org/P4310320527"],"host_organization_lineage_names":["Frontiers Media"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Microbiology","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.8499000072479248,"display_name":"Good health and well-being"}],"sustainable_development_goals_aurora":[{"id":"https://metadata.un.org/sdg/3","score":0.8399999737739563,"display_name":"Good health and well-being"}],"study_designs":[{"id":"https://openalex.org/study-designs/observational-study","display_name":"Observational Study"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320332487","display_name":"Onyx Pharmaceuticals","ror":"https://ror.org/03g03ge92"},{"id":"https://openalex.org/F4320337376","display_name":"NIH Clinical Center","ror":"https://ror.org/04vfsmv21"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4392183003.pdf","grobid_xml":"https://content.openalex.org/works/W4392183003.grobid-xml"},"referenced_works_count":35,"referenced_works":["https://openalex.org/W2952045272","https://openalex.org/W3003464757","https://openalex.org/W3021673562","https://openalex.org/W3022687324","https://openalex.org/W3024247396","https://openalex.org/W3039901154","https://openalex.org/W3104938080","https://openalex.org/W3111232141","https://openalex.org/W3118497926","https://openalex.org/W3129422067","https://openalex.org/W3134792846","https://openalex.org/W3136588845","https://openalex.org/W3138189425","https://openalex.org/W3158655361","https://openalex.org/W3170646051","https://openalex.org/W3179683961","https://openalex.org/W3199167671","https://openalex.org/W3208272390","https://openalex.org/W3210408195","https://openalex.org/W3215610096","https://openalex.org/W4200026214","https://openalex.org/W4200373171","https://openalex.org/W4205815466","https://openalex.org/W4210429338","https://openalex.org/W4280578293","https://openalex.org/W4283825560","https://openalex.org/W4289781746","https://openalex.org/W4290059155","https://openalex.org/W4291016546","https://openalex.org/W4308634906","https://openalex.org/W4318065436","https://openalex.org/W4367316249","https://openalex.org/W4367600264","https://openalex.org/W4382937594","https://openalex.org/W4385549237"],"related_works":["https://openalex.org/W2174809885","https://openalex.org/W2057191541","https://openalex.org/W2949296710","https://openalex.org/W2883025420","https://openalex.org/W1992658754","https://openalex.org/W2111939425","https://openalex.org/W2065083790","https://openalex.org/W2604174992","https://openalex.org/W2375383082","https://openalex.org/W1974895455"],"abstract_inverted_index":{"The":[0,168,218,256],"severe":[1],"acute":[2],"respiratory":[3],"syndrome":[4],"coronavirus":[5],"2":[6],"(SARS-CoV-2),":[7],"responsible":[8],"for":[9,36,347],"the":[10,26,29,33,41,55,73,79,108,116,132,161,183,190,198,202,212,263,269,276,290,320,333,338],"COVID-19":[11,175],"pandemic,":[12],"has":[13],"been":[14],"evolving":[15],"rapidly":[16],"causing":[17],"emergence":[18,56],"of":[19,28,32,43,57,75,81,110,120,139,152,160,204,216,268,289,325,330,340],"new":[20,58],"variants":[21,138],"and":[22,40,45,62,84,93,105,126,146,149,189,242,244,254,265,282,284,312,327,342,350],"health":[23,38],"uncertainties.":[24],"Monitoring":[25],"evolution":[27],"virus":[30],"was":[31],"utmost":[34],"importance":[35,339],"public":[37],"interventions":[39],"development":[42],"national":[44,52,345],"global":[46],"mitigation":[47],"strategies.":[48],"Here,":[49],"we":[50,135],"report":[51],"data":[53],"on":[54],"variants,":[59],"their":[60],"distribution,":[61],"dynamics":[63,194],"in":[64,78,173,178,187,195,207,262,323,335],"a":[65],"3-year":[66,133],"study":[67,318],"conducted":[68],"from":[69,87],"March":[70],"2020":[71],"to":[72,123,164,182,222],"end":[74],"January":[76],"2023":[77],"Republic":[80],"Serbia.":[82,217],"Nasopharyngeal":[83],"oropharyngeal":[85],"swabs":[86],"2,398":[88],"COVID-19-positive":[89],"patients":[90],"were":[91,129,220],"collected":[92],"sequenced":[94],"using":[95],"three":[96,137],"different":[97,246],"next":[98],"generation":[99],"technologies:":[100],"Oxford":[101],"Nanopore,":[102],"Ion":[103],"Torrent,":[104],"DNBSeq.":[106],"In":[107],"subset":[109],"2,107":[111],"SARS-CoV-2":[112,124,166,170,224,270,331,349],"sequences":[113],"which":[114,180],"met":[115],"quality":[117],"requirements,":[118],"detection":[119],"mutations,":[121],"assignment":[122],"lineages,":[125],"phylogenetic":[127],"analysis":[128],"performed.":[130],"During":[131],"period,":[134],"detected":[136,169,261],"concern,":[140],"namely,":[141],"Alpha":[142],"(5.6%),":[143],"Delta":[144],"(7.4%),":[145],"Omicron":[147,247],"(70.3%)":[148],"one":[150,285],"variant":[151],"interest-Omicron":[153],"recombinant":[154],"\"Kraken\"":[155],"(XBB1.5)":[156],"(<1%),":[157],"whereas":[158],"16.8%":[159],"samples":[162,219],"belonged":[163],"other":[165,351],"(sub)lineages.":[167],"(sub)lineages":[171],"resulted":[172],"eight":[174],"pandemic":[176,184,205,334],"waves":[177,185,206],"Serbia,":[179,336],"correspond":[181],"reported":[186],"Europe":[188],"United":[191],"States.":[192],"Wave":[193],"Serbia":[196],"showed":[197],"most":[199,258,321],"resemblance":[200],"with":[201,211],"profile":[203],"southern":[208],"Europe,":[209],"consistent":[210],"southeastern":[213],"European":[214],"location":[215],"assigned":[221],"sixteen":[223],"Nextstrain":[225],"clades:":[226],"20A,":[227],"20B,":[228],"20C,":[229],"20D,":[230],"20E,":[231],"20G,":[232],"20I,":[233],"21J,":[234],"21K,":[235],"21L,":[236],"22A,":[237],"22B,":[238],"22C,":[239],"22D,":[240],"22E,":[241],"22F":[243],"six":[245],"recombinants":[248],"(XZ,":[249],"XAZ,":[250],"XAS,":[251],"XBB,":[252],"XBF,":[253],"XBK).":[255],"10":[257],"common":[259],"mutations":[260,274],"coding":[264],"untranslated":[266],"regions":[267],"genomes":[271],"included":[272],"four":[273],"affecting":[275],"spike":[277],"protein":[278,297,300,303,306,314],"(S:D614G,":[279],"S:T478K,":[280],"S:P681H,":[281],"S:S477N)":[283],"mutation":[286],"at":[287],"each":[288],"following":[291],"positions:":[292],"5'-untranslated":[293],"region":[294],"(5'UTR:241);":[295],"N":[296],"(N:RG203KR);":[298],"NSP3":[299],"(NSP3:F106F);":[301],"NSP4":[302],"(NSP4:T492I);":[304],"NSP6":[305],"(NSP6:":[307],"S106/G107/F108":[308],"-":[309],"triple":[310],"deletion),":[311],"NSP12b":[313],"(NSP12b:P314L).":[315],"This":[316],"national-level":[317],"is":[319],"comprehensive":[322],"terms":[324],"sequencing":[326],"genomic":[328],"surveillance":[329],"during":[332],"highlighting":[337],"establishing":[341],"maintaining":[343],"good":[344],"practice":[346],"monitoring":[348],"viruses":[352],"circulating":[353],"worldwide.":[354]},"counts_by_year":[{"year":2025,"cited_by_count":4}],"updated_date":"2026-10-16T09:59:22.235173","created_date":"2025-10-10T00:00:00"}